RNA–Protein interactions for RNA: ENST00000548980.1

NCKAP1L-206, Transcript of NCK associated protein 1 like, humanhuman

TSL 2

Gene NCKAP1L, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-206ENST00000548980 MYLIPQ8WY64 445 aa12.15□□□□□ -0.46
NCKAP1L-206ENST00000548980 SYMPKQ92797 1274 aaKnown RBP12.15□□□□□ -0.46
NCKAP1L-206ENST00000548980 ASCC2Q9H1I8 757 aaPredicted RBP12.15□□□□□ -0.46
NCKAP1L-206ENST00000548980 MORF4L1Q9UBU8 362 aa12.15□□□□□ -0.46
NCKAP1L-206ENST00000548980 UTYO14607 1347 aa12.14□□□□□ -0.47
NCKAP1L-206ENST00000548980 MYH2Q9UKX2 1941 aa12.14□□□□□ -0.47
NCKAP1L-206ENST00000548980 XRCC5P13010 732 aaKnown RBP12.14□□□□□ -0.47
NCKAP1L-206ENST00000548980 SLC5A1P13866 664 aa12.14□□□□□ -0.47
NCKAP1L-206ENST00000548980 ZKSCAN1P17029 563 aaPredicted RBP12.14□□□□□ -0.47
NCKAP1L-206ENST00000548980 CCND3P30281 292 aaPredicted RBP12.14□□□□□ -0.47
NCKAP1L-206ENST00000548980 HMGCS2P54868 508 aa12.14□□□□□ -0.47
NCKAP1L-206ENST00000548980 CACNB2Q08289 660 aaPredicted RBP12.14□□□□□ -0.47
NCKAP1L-206ENST00000548980 SPP2Q13103 211 aa12.14□□□□□ -0.47
NCKAP1L-206ENST00000548980 PABPC4Q13310 644 aaKnown RBP eCLIP12.14□□□□□ -0.47
NCKAP1L-206ENST00000548980 LHX8Q68G74 356 aa12.14□□□□□ -0.47
NCKAP1L-206ENST00000548980 NUDT12Q9BQG2 462 aa12.14□□□□□ -0.47
NCKAP1L-206ENST00000548980 SEMA6BQ9H3T3 888 aa12.14□□□□□ -0.47
NCKAP1L-206ENST00000548980 DDX4Q9NQI0 724 aaKnown RBP12.14□□□□□ -0.47
NCKAP1L-206ENST00000548980 ATAD5Q96QE3 1844 aa12.14□□□□□ -0.47
NCKAP1L-206ENST00000548980 GAKO14976 1311 aa12.13□□□□□ -0.47
NCKAP1L-206ENST00000548980 SALL1Q9NSC2 1324 aa12.13□□□□□ -0.47
NCKAP1L-206ENST00000548980 EXOSC9Q06265 439 aaKnown RBP12.13□□□□□ -0.47
NCKAP1L-206ENST00000548980 ZNF280CQ8ND82 737 aa12.13□□□□□ -0.47
NCKAP1L-206ENST00000548980 LPIN2Q92539 896 aa12.13□□□□□ -0.47
NCKAP1L-206ENST00000548980 TTYH1Q9H313 450 aaPredicted RBP12.13□□□□□ -0.47
NCKAP1L-206ENST00000548980 PRKRIP1Q9H875 184 aaPredicted RBP12.13□□□□□ -0.47
NCKAP1L-206ENST00000548980 FAM196BA6NMK8 535 aa12.12□□□□□ -0.47
NCKAP1L-206ENST00000548980 FOSL2P15408 326 aa12.12□□□□□ -0.47
NCKAP1L-206ENST00000548980 PICALMQ13492 652 aa12.12□□□□□ -0.47
NCKAP1L-206ENST00000548980 TRMT44Q8IYL2 757 aaKnown RBP12.12□□□□□ -0.47
NCKAP1L-206ENST00000548980 SENP6Q9GZR1 1112 aaPredicted RBP12.12□□□□□ -0.47
NCKAP1L-206ENST00000548980 RAPGEFL1Q9UHV5 662 aa12.12□□□□□ -0.47
NCKAP1L-206ENST00000548980 TNFRSF10AO00220 468 aa12.11□□□□□ -0.47
NCKAP1L-206ENST00000548980 TBC1D12O60347 775 aa12.11□□□□□ -0.47
NCKAP1L-206ENST00000548980 PEX10O60683 326 aa12.11□□□□□ -0.47
NCKAP1L-206ENST00000548980 PDE3AQ14432 1141 aa12.11□□□□□ -0.47
NCKAP1L-206ENST00000548980 SHHQ15465 462 aa12.11□□□□□ -0.47
NCKAP1L-206ENST00000548980 CCL14Q16627 93 aa12.11□□□□□ -0.47
NCKAP1L-206ENST00000548980 C9orf50Q5SZB4 431 aa12.11□□□□□ -0.47
NCKAP1L-206ENST00000548980 TBC1D2Q9BYX2 928 aa12.11□□□□□ -0.47
NCKAP1L-206ENST00000548980 OSBPL5Q9H0X9 879 aaPredicted RBP12.11□□□□□ -0.47
NCKAP1L-206ENST00000548980 TXNRD2Q9NNW7 524 aa12.11□□□□□ -0.47
NCKAP1L-206ENST00000548980 PRKAG2Q9UGJ0 569 aa12.11□□□□□ -0.47
NCKAP1L-206ENST00000548980 EYA2O00167 538 aa12.1□□□□□ -0.47
NCKAP1L-206ENST00000548980 RGS2P41220 211 aa12.1□□□□□ -0.47
NCKAP1L-206ENST00000548980 BTDP43251 543 aa12.1□□□□□ -0.47
NCKAP1L-206ENST00000548980 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
NCKAP1L-206ENST00000548980 IRX3P78415 501 aaPredicted RBP12.1□□□□□ -0.47
NCKAP1L-206ENST00000548980 SMAD3P84022 425 aaKnown RBP12.1□□□□□ -0.47
NCKAP1L-206ENST00000548980 SH3D19Q5HYK7 790 aa12.1□□□□□ -0.47
NCKAP1L-206ENST00000548980 TJAP1Q5JTD0 557 aa12.1□□□□□ -0.47
NCKAP1L-206ENST00000548980 USP6NLQ92738 828 aa12.1□□□□□ -0.47
NCKAP1L-206ENST00000548980 APBA2Q99767 749 aa12.1□□□□□ -0.47
NCKAP1L-206ENST00000548980 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.1□□□□□ -0.47
NCKAP1L-206ENST00000548980 GNL3LQ9NVN8 582 aaKnown RBP12.1□□□□□ -0.47
NCKAP1L-206ENST00000548980 DENND2AQ9ULE3 1009 aa12.1□□□□□ -0.47
NCKAP1L-206ENST00000548980 MAPK4P31152 587 aa12.09□□□□□ -0.47
NCKAP1L-206ENST00000548980 PLA2G5P39877 138 aa12.09□□□□□ -0.47
NCKAP1L-206ENST00000548980 RTP1P59025 263 aa12.09□□□□□ -0.47
NCKAP1L-206ENST00000548980 MORN1Q5T089 497 aa12.09□□□□□ -0.47
NCKAP1L-206ENST00000548980 GPR142Q7Z601 462 aa12.09□□□□□ -0.47
NCKAP1L-206ENST00000548980 DZIP1Q86YF9 867 aaKnown RBP12.09□□□□□ -0.47
NCKAP1L-206ENST00000548980 GPRC5AQ8NFJ5 357 aa12.09□□□□□ -0.47
NCKAP1L-206ENST00000548980 P2RX7Q99572 595 aaKnown RBP12.09□□□□□ -0.47
NCKAP1L-206ENST00000548980 PORCNQ9H237 461 aa12.09□□□□□ -0.47
NCKAP1L-206ENST00000548980 USP17L5A8MUK1 530 aa12.08□□□□□ -0.48
NCKAP1L-206ENST00000548980 SEMA3EO15041 775 aa12.08□□□□□ -0.48
NCKAP1L-206ENST00000548980 CAP2P40123 477 aa12.08□□□□□ -0.48
NCKAP1L-206ENST00000548980 PHKA1P46020 1223 aa12.08□□□□□ -0.48
NCKAP1L-206ENST00000548980 RFX5P48382 616 aaPredicted RBP12.08□□□□□ -0.48
NCKAP1L-206ENST00000548980 HERVK_113P62684 666 aa12.08□□□□□ -0.48
NCKAP1L-206ENST00000548980 MTMR2Q13614 643 aa12.08□□□□□ -0.48
NCKAP1L-206ENST00000548980 RRP1BQ14684 758 aaKnown RBP12.08□□□□□ -0.48
NCKAP1L-206ENST00000548980 ATP2B3Q16720 1220 aa12.08□□□□□ -0.48
NCKAP1L-206ENST00000548980 ZGPATQ8N5A5 531 aaKnown RBP12.08□□□□□ -0.48
NCKAP1L-206ENST00000548980 USP38Q8NB14 1042 aa12.08□□□□□ -0.48
NCKAP1L-206ENST00000548980 AS3MTQ9HBK9 375 aa12.08□□□□□ -0.48
NCKAP1L-206ENST00000548980 MROH7-TTC4A0A0A0MT08 1334 aa12.08□□□□□ -0.48
NCKAP1L-206ENST00000548980 RLFQ13129 1914 aa12.07□□□□□ -0.48
NCKAP1L-206ENST00000548980 TMEM265A0A087WTH1 108 aa12.07□□□□□ -0.48
NCKAP1L-206ENST00000548980 DNM1LO00429 736 aa12.07□□□□□ -0.48
NCKAP1L-206ENST00000548980 NPM3O75607 178 aaKnown RBP12.07□□□□□ -0.48
NCKAP1L-206ENST00000548980 HOXA7P31268 230 aaPredicted RBP12.07□□□□□ -0.48
NCKAP1L-206ENST00000548980 RHBDL3P58872 404 aa12.07□□□□□ -0.48
NCKAP1L-206ENST00000548980 ERVK-9P63128 1117 aa12.07□□□□□ -0.48
NCKAP1L-206ENST00000548980 ERVK-24P63145 666 aa12.07□□□□□ -0.48
NCKAP1L-206ENST00000548980 ATG9AQ7Z3C6 839 aa12.07□□□□□ -0.48
NCKAP1L-206ENST00000548980 PLEKHH3Q7Z736 793 aa12.07□□□□□ -0.48
NCKAP1L-206ENST00000548980 SLF2Q8IX21 1173 aa12.07□□□□□ -0.48
NCKAP1L-206ENST00000548980 LPAR1Q92633 364 aa12.07□□□□□ -0.48
NCKAP1L-206ENST00000548980 FAM163AQ96GL9 167 aaPredicted RBP12.07□□□□□ -0.48
NCKAP1L-206ENST00000548980 RBPJLQ9UBG7 517 aa12.07□□□□□ -0.48
NCKAP1L-206ENST00000548980 DDX20Q9UHI6 824 aaKnown RBP12.07□□□□□ -0.48
NCKAP1L-206ENST00000548980 ATP11BQ9Y2G3 1177 aa12.07□□□□□ -0.48
NCKAP1L-206ENST00000548980 MSCO60682 206 aa12.06□□□□□ -0.48
NCKAP1L-206ENST00000548980 BACE1P56817 501 aa12.06□□□□□ -0.48
NCKAP1L-206ENST00000548980 Q3C1V9 767 aa12.06□□□□□ -0.48
NCKAP1L-206ENST00000548980 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
NCKAP1L-206ENST00000548980 CCAR1Q8IX12 1150 aaKnown RBP12.06□□□□□ -0.48
NCKAP1L-206ENST00000548980 BADQ92934 168 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms