RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 MED15Q96RN5 788 aa15.7■□□□□ 0.1
HDAC7-228ENST00000548938 ECM29Q5VYK3 1845 aa15.7■□□□□ 0.1
HDAC7-228ENST00000548938 UBN2Q6ZU65 1347 aa15.7■□□□□ 0.1
HDAC7-228ENST00000548938 STK11IPQ8N1F8 1099 aa15.69■□□□□ 0.1
HDAC7-228ENST00000548938 CCDC85AQ96PX6 553 aaPredicted RBP15.69■□□□□ 0.1
HDAC7-228ENST00000548938 TEX13AQ9BXU3 409 aaPredicted RBP15.69■□□□□ 0.1
HDAC7-228ENST00000548938 TRIM34Q9BYJ4 488 aa15.69■□□□□ 0.1
HDAC7-228ENST00000548938 LZTFL1Q9NQ48 299 aa15.69■□□□□ 0.1
HDAC7-228ENST00000548938 SAMSN1Q9NSI8 373 aaKnown RBP15.69■□□□□ 0.1
HDAC7-228ENST00000548938 RAI14Q9P0K7 980 aa15.69■□□□□ 0.1
HDAC7-228ENST00000548938 SHANK3Q9BYB0 1731 aa15.69■□□□□ 0.1
HDAC7-228ENST00000548938 CCDC151A5D8V7 595 aa15.69■□□□□ 0.1
HDAC7-228ENST00000548938 TRIM29Q14134 588 aa15.69■□□□□ 0.1
HDAC7-228ENST00000548938 RGS22Q8NE09 1264 aa15.69■□□□□ 0.1
HDAC7-228ENST00000548938 ADAM21Q9UKJ8 722 aa15.69■□□□□ 0.1
HDAC7-228ENST00000548938 B4E1Z4 1266 aa15.68■□□□□ 0.1
HDAC7-228ENST00000548938 IARSP41252 1262 aaKnown RBP15.68■□□□□ 0.1
HDAC7-228ENST00000548938 LMAN1P49257 510 aa15.68■□□□□ 0.1
HDAC7-228ENST00000548938 CHMP4BP1P59074 171 aa15.68■□□□□ 0.1
HDAC7-228ENST00000548938 NTRK3Q16288 839 aa15.68■□□□□ 0.1
HDAC7-228ENST00000548938 CPLX2Q6PUV4 134 aaKnown RBP15.68■□□□□ 0.1
HDAC7-228ENST00000548938 CCDC191Q8NCU4 936 aa15.68■□□□□ 0.1
HDAC7-228ENST00000548938 ENOX1Q8TC92 643 aaKnown RBP15.68■□□□□ 0.1
HDAC7-228ENST00000548938 COL22A1Q8NFW1 1626 aaPredicted RBP15.68■□□□□ 0.1
HDAC7-228ENST00000548938 POLR2DO15514 142 aaKnown RBP15.68■□□□□ 0.1
HDAC7-228ENST00000548938 TSPYL1Q9H0U9 437 aa15.68■□□□□ 0.1
HDAC7-228ENST00000548938 SERTAD1Q9UHV2 236 aa15.68■□□□□ 0.1
HDAC7-228ENST00000548938 PUF60Q9UHX1 559 aaKnown RBP15.68■□□□□ 0.1
HDAC7-228ENST00000548938 LAMB4A4D0S4 1761 aa15.68■□□□□ 0.1
HDAC7-228ENST00000548938 COL14A1Q05707 1796 aaKnown RBP15.68■□□□□ 0.1
HDAC7-228ENST00000548938 GOLGA8AA7E2F4 631 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 MAP2K7O14733 419 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 ZBTB43O43298 467 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 CCDC175P0C221 793 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 ANKZF1Q9H8Y5 726 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 ATG3Q9NT62 314 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 FAM217BQ9NTX9 383 aaPredicted RBP15.67■□□□□ 0.1
HDAC7-228ENST00000548938 COL16A1Q07092 1604 aaPredicted RBP15.67■□□□□ 0.1
HDAC7-228ENST00000548938 MORC3Q14149 939 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 BRD3Q15059 726 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 JAKMIP3Q5VZ66 844 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 RAD9BQ6WBX8 426 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 NFXL1Q6ZNB6 911 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 SRGAP1Q7Z6B7 1085 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 MLKLQ8NB16 471 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 EXOC4Q96A65 974 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 AK7Q96M32 723 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 SLC26A6Q9BXS9 759 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 SEC31BQ9NQW1 1179 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 LCMT1Q9UIC8 334 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 HOOK1Q9UJC3 728 aaKnown RBP15.67■□□□□ 0.1
HDAC7-228ENST00000548938 NUP188Q5SRE5 1749 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 TEX33O43247 280 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 A1BGP04217 495 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 TOB1P50616 345 aaPredicted RBP15.67■□□□□ 0.1
HDAC7-228ENST00000548938 CCDC57Q2TAC2 916 aa15.67■□□□□ 0.1
HDAC7-228ENST00000548938 NUTM2AQ8IVF1 878 aaPredicted RBP15.67■□□□□ 0.1
HDAC7-228ENST00000548938 BTBD18B2RXH4 712 aa15.66■□□□□ 0.1
HDAC7-228ENST00000548938 AKR1B15C9JRZ8 316 aaPredicted RBP15.66■□□□□ 0.1
HDAC7-228ENST00000548938 ADAMTS2O95450 1211 aa15.66■□□□□ 0.1
HDAC7-228ENST00000548938 SARSP49591 514 aaKnown RBP15.66■□□□□ 0.1
HDAC7-228ENST00000548938 MCM6Q14566 821 aa15.66■□□□□ 0.1
HDAC7-228ENST00000548938 NR1I3Q14994 352 aa15.66■□□□□ 0.1
HDAC7-228ENST00000548938 NT5DC1Q5TFE4 455 aa15.66■□□□□ 0.1
HDAC7-228ENST00000548938 NOSTRINQ8IVI9 506 aa15.66■□□□□ 0.1
HDAC7-228ENST00000548938 PNKPQ96T60 521 aa15.66■□□□□ 0.1
HDAC7-228ENST00000548938 INCENPQ9NQS7 918 aa15.66■□□□□ 0.1
HDAC7-228ENST00000548938 FBXO2Q9UK22 296 aaPredicted RBP15.66■□□□□ 0.1
HDAC7-228ENST00000548938 AKAP2Q9Y2D5 859 aa15.66■□□□□ 0.1
HDAC7-228ENST00000548938 ADGRG1Q9Y653 693 aa15.66■□□□□ 0.1
HDAC7-228ENST00000548938 DISP2A7MBM2 1401 aa15.66■□□□□ 0.1
HDAC7-228ENST00000548938 TFRCP02786 760 aaKnown RBP15.66■□□□□ 0.1
HDAC7-228ENST00000548938 APPP05067 770 aa15.66■□□□□ 0.1
HDAC7-228ENST00000548938 PIP4K2BP78356 416 aa15.66■□□□□ 0.1
HDAC7-228ENST00000548938 SLC9C2Q5TAH2 1124 aa15.66■□□□□ 0.1
HDAC7-228ENST00000548938 PDE11AQ9HCR9 933 aa15.66■□□□□ 0.1
HDAC7-228ENST00000548938 DACH1Q9UI36 760 aa15.66■□□□□ 0.1
HDAC7-228ENST00000548938 A0A1B0GTH6 734 aa15.65■□□□□ 0.1
HDAC7-228ENST00000548938 GUCY1A2P33402 732 aa15.65■□□□□ 0.1
HDAC7-228ENST00000548938 MCAMP43121 646 aa15.65■□□□□ 0.1
HDAC7-228ENST00000548938 BEND6Q5SZJ8 279 aaPredicted RBP15.65■□□□□ 0.1
HDAC7-228ENST00000548938 ELOA2Q8IYF1 753 aaPredicted RBP15.65■□□□□ 0.1
HDAC7-228ENST00000548938 LY9Q9HBG7 655 aa15.65■□□□□ 0.1
HDAC7-228ENST00000548938 KCPQ6ZWJ8 1503 aa15.65■□□□□ 0.1
HDAC7-228ENST00000548938 GOLGA5Q8TBA6 731 aa15.65■□□□□ 0.1
HDAC7-228ENST00000548938 IGDCC4Q8TDY8 1250 aa15.65■□□□□ 0.1
HDAC7-228ENST00000548938 CPLX3Q8WVH0 158 aa15.65■□□□□ 0.1
HDAC7-228ENST00000548938 PANX2Q96RD6 677 aa15.65■□□□□ 0.1
HDAC7-228ENST00000548938 SUGCTQ9HAC7 445 aa15.65■□□□□ 0.1
HDAC7-228ENST00000548938 PSD3Q9NYI0 1048 aa15.65■□□□□ 0.1
HDAC7-228ENST00000548938 VPS18Q9P253 973 aa15.65■□□□□ 0.1
HDAC7-228ENST00000548938 KCNJ14Q9UNX9 436 aa15.65■□□□□ 0.1
HDAC7-228ENST00000548938 MAP3K15Q6ZN16 1313 aa15.65■□□□□ 0.1
HDAC7-228ENST00000548938 TRIM66O15016 1216 aa15.64■□□□□ 0.09
HDAC7-228ENST00000548938 PTPREP23469 700 aa15.64■□□□□ 0.09
HDAC7-228ENST00000548938 ADD2P35612 726 aa15.64■□□□□ 0.09
HDAC7-228ENST00000548938 TMEM67Q5HYA8 995 aa15.64■□□□□ 0.09
HDAC7-228ENST00000548938 USP49Q70CQ1 688 aa15.64■□□□□ 0.09
HDAC7-228ENST00000548938 APTXQ7Z2E3 356 aaKnown RBP15.64■□□□□ 0.09
HDAC7-228ENST00000548938 DIS3L2Q8IYB7 885 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms