RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.26□□□□□ -1.09
SCAF11-211ENST00000547950 SPATA5Q8NB90 893 aa8.26□□□□□ -1.09
SCAF11-211ENST00000547950 ERO1AQ96HE7 468 aa8.26□□□□□ -1.09
SCAF11-211ENST00000547950 EFCC1Q9HA90 598 aa8.26□□□□□ -1.09
SCAF11-211ENST00000547950 RAI14Q9P0K7 980 aa8.26□□□□□ -1.09
SCAF11-211ENST00000547950 ZNF646O15015 1829 aaPredicted RBP8.26□□□□□ -1.09
SCAF11-211ENST00000547950 BTBD19C9JJ37 291 aa8.25□□□□□ -1.09
SCAF11-211ENST00000547950 ZBTB7BO15156 539 aaPredicted RBP8.25□□□□□ -1.09
SCAF11-211ENST00000547950 ENTPD3O75355 529 aa8.25□□□□□ -1.09
SCAF11-211ENST00000547950 RLBP1P12271 317 aa8.25□□□□□ -1.09
SCAF11-211ENST00000547950 PPATQ06203 517 aa8.25□□□□□ -1.09
SCAF11-211ENST00000547950 PPIL2Q13356 520 aa8.25□□□□□ -1.09
SCAF11-211ENST00000547950 PLPP6Q8IY26 295 aa8.25□□□□□ -1.09
SCAF11-211ENST00000547950 SNRKQ9NRH2 765 aa8.25□□□□□ -1.09
SCAF11-211ENST00000547950 LRP2BPQ9P2M1 347 aa8.25□□□□□ -1.09
SCAF11-211ENST00000547950 ZNF112Q9UJU3 913 aa8.25□□□□□ -1.09
SCAF11-211ENST00000547950 GPR75-ASB3A0A0A6YYF3 556 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 LDHCP07864 332 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 UQCRFS1P1P0C7P4 283 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 SLURP2P0DP57 97 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 MCAMP43121 646 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 GSTO1P78417 241 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 CAP1Q01518 475 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 ARHGEF6Q15052 776 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 CCDC158Q5M9N0 1113 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 TTC39AQ5SRH9 613 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 SH3BP5LQ7L8J4 393 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 PANK1Q8TE04 598 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 SSH3Q8TE77 659 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 IDI2Q9BXS1 227 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 DDX4Q9NQI0 724 aaKnown RBP8.24□□□□□ -1.09
SCAF11-211ENST00000547950 PICK1Q9NRD5 415 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 PTPN22Q9Y2R2 807 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 ZHX2Q9Y6X8 837 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 MROH7-TTC4A0A0A0MT08 1334 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 GAKO14976 1311 aa8.24□□□□□ -1.09
SCAF11-211ENST00000547950 PDS5AQ29RF7 1337 aaKnown RBP8.24□□□□□ -1.09
SCAF11-211ENST00000547950 DDTLA6NHG4 134 aaPredicted RBP8.23□□□□□ -1.09
SCAF11-211ENST00000547950 PHF20L1A8MW92 1017 aa8.23□□□□□ -1.09
SCAF11-211ENST00000547950 PDHXO00330 501 aa8.23□□□□□ -1.09
SCAF11-211ENST00000547950 TLR2O60603 784 aa8.23□□□□□ -1.09
SCAF11-211ENST00000547950 ARID4AP29374 1257 aaPredicted RBP8.23□□□□□ -1.09
SCAF11-211ENST00000547950 KIF22Q14807 665 aa8.23□□□□□ -1.09
SCAF11-211ENST00000547950 TNNI3KQ59H18 835 aa8.23□□□□□ -1.09
SCAF11-211ENST00000547950 ZNF384Q8TF68 577 aa8.23□□□□□ -1.09
SCAF11-211ENST00000547950 NSUN4Q96CB9 384 aaKnown RBP8.23□□□□□ -1.09
SCAF11-211ENST00000547950 DBNDD2Q9BQY9 259 aa8.23□□□□□ -1.09
SCAF11-211ENST00000547950 BCL11AQ9H165 835 aa8.23□□□□□ -1.09
SCAF11-211ENST00000547950 GPHNQ9NQX3 736 aaPredicted RBP8.23□□□□□ -1.09
SCAF11-211ENST00000547950 FPGT-TNNI3KV9GXZ4 949 aa8.23□□□□□ -1.09
SCAF11-211ENST00000547950 RPAP1Q9BWH6 1393 aaPredicted RBP8.22□□□□□ -1.09
SCAF11-211ENST00000547950 A0A1B0GUL6 1792 aa8.22□□□□□ -1.09
SCAF11-211ENST00000547950 CTNND1O60716 968 aaKnown RBP8.22□□□□□ -1.09
SCAF11-211ENST00000547950 MYCP01106 439 aaPredicted RBP8.22□□□□□ -1.09
SCAF11-211ENST00000547950 PTPRAP18433 802 aa8.22□□□□□ -1.09
SCAF11-211ENST00000547950 RHBDL3P58872 404 aa8.22□□□□□ -1.09
SCAF11-211ENST00000547950 LSM11P83369 360 aaKnown RBP eCLIP8.22□□□□□ -1.09
SCAF11-211ENST00000547950 FOXK1P85037 733 aa8.22□□□□□ -1.09
SCAF11-211ENST00000547950 DSG2Q14126 1118 aa8.22□□□□□ -1.09
SCAF11-211ENST00000547950 NOL9Q5SY16 702 aaKnown RBP8.22□□□□□ -1.09
SCAF11-211ENST00000547950 NAA16Q6N069 864 aaPredicted RBP8.22□□□□□ -1.09
SCAF11-211ENST00000547950 ANKRD23Q86SG2 305 aa8.22□□□□□ -1.09
SCAF11-211ENST00000547950 SCYL3Q8IZE3 742 aa8.22□□□□□ -1.09
SCAF11-211ENST00000547950 SH3RF3Q8TEJ3 882 aaPredicted RBP8.22□□□□□ -1.09
SCAF11-211ENST00000547950 NOL10Q9BSC4 688 aaKnown RBP8.22□□□□□ -1.09
SCAF11-211ENST00000547950 ARHGAP39Q9C0H5 1083 aa8.22□□□□□ -1.09
SCAF11-211ENST00000547950 CCDC8Q9H0W5 538 aaPredicted RBP8.22□□□□□ -1.09
SCAF11-211ENST00000547950 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.22□□□□□ -1.09
SCAF11-211ENST00000547950 ZCCHC17Q9NP64 241 aaKnown RBP8.22□□□□□ -1.09
SCAF11-211ENST00000547950 GPR108Q9NPR9 543 aa8.22□□□□□ -1.09
SCAF11-211ENST00000547950 CPA4Q9UI42 421 aa8.22□□□□□ -1.09
SCAF11-211ENST00000547950 KCNH4Q9UQ05 1017 aa8.22□□□□□ -1.09
SCAF11-211ENST00000547950 NOP58Q9Y2X3 529 aaKnown RBP8.22□□□□□ -1.09
SCAF11-211ENST00000547950 ZBED9Q6R2W3 1325 aa8.22□□□□□ -1.09
SCAF11-211ENST00000547950 TRIM75PA6NK02 468 aa8.21□□□□□ -1.1
SCAF11-211ENST00000547950 FAM196BA6NMK8 535 aa8.21□□□□□ -1.1
SCAF11-211ENST00000547950 CXCL11O14625 94 aa8.21□□□□□ -1.1
SCAF11-211ENST00000547950 BAG3O95817 575 aa8.21□□□□□ -1.1
SCAF11-211ENST00000547950 CYP2E1P05181 493 aaPredicted RBP8.21□□□□□ -1.1
SCAF11-211ENST00000547950 CYP2C8P10632 490 aa8.21□□□□□ -1.1
SCAF11-211ENST00000547950 ZAP70P43403 619 aa8.21□□□□□ -1.1
SCAF11-211ENST00000547950 LACTBP83111 547 aaPredicted RBP8.21□□□□□ -1.1
SCAF11-211ENST00000547950 MAP3K10Q02779 954 aa8.21□□□□□ -1.1
SCAF11-211ENST00000547950 CEP85Q6P2H3 762 aa8.21□□□□□ -1.1
SCAF11-211ENST00000547950 C17orf99Q6UX52 265 aa8.21□□□□□ -1.1
SCAF11-211ENST00000547950 CCDC84Q86UT8 332 aaPredicted RBP8.21□□□□□ -1.1
SCAF11-211ENST00000547950 TEX11Q8IYF3 940 aa8.21□□□□□ -1.1
SCAF11-211ENST00000547950 EAF2Q96CJ1 260 aaPredicted RBP8.21□□□□□ -1.1
SCAF11-211ENST00000547950 AATFQ9NY61 560 aaKnown RBP eCLIP8.21□□□□□ -1.1
SCAF11-211ENST00000547950 AFG3L2Q9Y4W6 797 aa8.21□□□□□ -1.1
SCAF11-211ENST00000547950 PTCH2Q9Y6C5 1203 aa8.21□□□□□ -1.1
SCAF11-211ENST00000547950 APBB1O00213 710 aa8.2□□□□□ -1.1
SCAF11-211ENST00000547950 FMNL1O95466 1100 aaPredicted RBP8.2□□□□□ -1.1
SCAF11-211ENST00000547950 MAP4K4O95819 1239 aaPredicted RBP8.2□□□□□ -1.1
SCAF11-211ENST00000547950 MS4A1P11836 297 aa8.2□□□□□ -1.1
SCAF11-211ENST00000547950 PSMC4P43686 418 aa8.2□□□□□ -1.1
SCAF11-211ENST00000547950 MOGSQ13724 837 aa8.2□□□□□ -1.1
SCAF11-211ENST00000547950 SLC9C1Q4G0N8 1177 aa8.2□□□□□ -1.1
SCAF11-211ENST00000547950 GPAT2Q6NUI2 795 aa8.2□□□□□ -1.1
SCAF11-211ENST00000547950 GADL1Q6ZQY3 521 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms