RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 NPAS4Q8IUM7 802 aa4.9□□□□□ -1.63
DEPDC4-204ENST00000547823 GLYCTKQ8IVS8 523 aa4.9□□□□□ -1.63
DEPDC4-204ENST00000547823 SULF2Q8IWU5 870 aa4.9□□□□□ -1.63
DEPDC4-204ENST00000547823 PRDM5Q9NQX1 630 aaPredicted RBP4.9□□□□□ -1.63
DEPDC4-204ENST00000547823 SAMM50Q9Y512 469 aa4.9□□□□□ -1.63
DEPDC4-204ENST00000547823 CUX2O14529 1486 aa4.89□□□□□ -1.63
DEPDC4-204ENST00000547823 FANCGO15287 622 aa4.89□□□□□ -1.63
DEPDC4-204ENST00000547823 TMEM253P0C7T8 217 aa4.89□□□□□ -1.63
DEPDC4-204ENST00000547823 RAC2P15153 192 aa4.89□□□□□ -1.63
DEPDC4-204ENST00000547823 NME2P22392 152 aa4.89□□□□□ -1.63
DEPDC4-204ENST00000547823 ARNTP27540 789 aa4.89□□□□□ -1.63
DEPDC4-204ENST00000547823 CIAPIN1Q6FI81 312 aa4.89□□□□□ -1.63
DEPDC4-204ENST00000547823 ACSBG1Q96GR2 724 aa4.89□□□□□ -1.63
DEPDC4-204ENST00000547823 PRDM7Q9NQW5 492 aa4.89□□□□□ -1.63
DEPDC4-204ENST00000547823 EIF1AYO14602 144 aaKnown RBP4.88□□□□□ -1.63
DEPDC4-204ENST00000547823 C1QTNF9P0C862 333 aa4.88□□□□□ -1.63
DEPDC4-204ENST00000547823 ORC1Q13415 861 aa4.88□□□□□ -1.63
DEPDC4-204ENST00000547823 GRM2Q14416 872 aa4.88□□□□□ -1.63
DEPDC4-204ENST00000547823 NKPD1Q17RQ9 610 aa4.88□□□□□ -1.63
DEPDC4-204ENST00000547823 ZNF746Q6NUN9 644 aaPredicted RBP4.88□□□□□ -1.63
DEPDC4-204ENST00000547823 PRR23BQ6ZRT6 265 aa4.88□□□□□ -1.63
DEPDC4-204ENST00000547823 CDC37L1Q7L3B6 337 aa4.88□□□□□ -1.63
DEPDC4-204ENST00000547823 THAP5Q7Z6K1 395 aa4.88□□□□□ -1.63
DEPDC4-204ENST00000547823 COX4I2Q96KJ9 171 aa4.88□□□□□ -1.63
DEPDC4-204ENST00000547823 DMRTB1Q96MA1 342 aa4.88□□□□□ -1.63
DEPDC4-204ENST00000547823 EPB41L4BQ9H329 900 aa4.88□□□□□ -1.63
DEPDC4-204ENST00000547823 PICK1Q9NRD5 415 aa4.88□□□□□ -1.63
DEPDC4-204ENST00000547823 TCAF2A6NFQ2 919 aa4.87□□□□□ -1.63
DEPDC4-204ENST00000547823 FAM155AB1AL88 458 aaPredicted RBP4.87□□□□□ -1.63
DEPDC4-204ENST00000547823 H3BRB1 525 aa4.87□□□□□ -1.63
DEPDC4-204ENST00000547823 LRIG2O94898 1065 aa4.87□□□□□ -1.63
DEPDC4-204ENST00000547823 MED14OSP0DP75 135 aa4.87□□□□□ -1.63
DEPDC4-204ENST00000547823 GLDCP23378 1020 aa4.87□□□□□ -1.63
DEPDC4-204ENST00000547823 ZNF157P51786 506 aaPredicted RBP4.87□□□□□ -1.63
DEPDC4-204ENST00000547823 FYB2Q5VWT5 728 aa4.87□□□□□ -1.63
DEPDC4-204ENST00000547823 ALKBH8Q96BT7 664 aaKnown RBP4.87□□□□□ -1.63
DEPDC4-204ENST00000547823 SLC26A8Q96RN1 970 aa4.87□□□□□ -1.63
DEPDC4-204ENST00000547823 NSUN3Q9H649 340 aaKnown RBP4.87□□□□□ -1.63
DEPDC4-204ENST00000547823 TUT1Q9H6E5 874 aaKnown RBP4.87□□□□□ -1.63
DEPDC4-204ENST00000547823 CARS2Q9HA77 564 aaKnown RBP4.87□□□□□ -1.63
DEPDC4-204ENST00000547823 ANO2Q9NQ90 1003 aa4.87□□□□□ -1.63
DEPDC4-204ENST00000547823 NLRP2Q9NX02 1062 aa4.87□□□□□ -1.63
DEPDC4-204ENST00000547823 SRFP11831 508 aa4.86□□□□□ -1.63
DEPDC4-204ENST00000547823 KCNA10Q16322 511 aa4.86□□□□□ -1.63
DEPDC4-204ENST00000547823 MAP1SQ66K74 1059 aaPredicted RBP4.86□□□□□ -1.63
DEPDC4-204ENST00000547823 PHLDB3Q6NSJ2 640 aa4.86□□□□□ -1.63
DEPDC4-204ENST00000547823 MFSD4AQ8N468 514 aa4.86□□□□□ -1.63
DEPDC4-204ENST00000547823 CD320Q9NPF0 282 aa4.86□□□□□ -1.63
DEPDC4-204ENST00000547823 CACNA2D2Q9NY47 1150 aa4.86□□□□□ -1.63
DEPDC4-204ENST00000547823 NPIPB6E9PJ23 425 aa4.85□□□□□ -1.63
DEPDC4-204ENST00000547823 TRIM37O94972 964 aa4.85□□□□□ -1.63
DEPDC4-204ENST00000547823 FCGRTP55899 365 aa4.85□□□□□ -1.63
DEPDC4-204ENST00000547823 CTSWP56202 376 aa4.85□□□□□ -1.63
DEPDC4-204ENST00000547823 ZNF252P-AS1Q0IIN9 211 aa4.85□□□□□ -1.63
DEPDC4-204ENST00000547823 GPBAR1Q8TDU6 330 aa4.85□□□□□ -1.63
DEPDC4-204ENST00000547823 CSRNP1Q96S65 589 aa4.85□□□□□ -1.63
DEPDC4-204ENST00000547823 CEP44Q9C0F1 390 aa4.85□□□□□ -1.63
DEPDC4-204ENST00000547823 DCP1AQ9NPI6 582 aaPredicted RBP4.85□□□□□ -1.63
DEPDC4-204ENST00000547823 USTQ9Y2C2 406 aa4.85□□□□□ -1.63
DEPDC4-204ENST00000547823 EIF4G1Q04637 1599 aaKnown RBP4.85□□□□□ -1.63
DEPDC4-204ENST00000547823 SHROOM4Q9ULL8 1493 aa4.84□□□□□ -1.63
DEPDC4-204ENST00000547823 EOMESO95936 686 aa4.84□□□□□ -1.63
DEPDC4-204ENST00000547823 KRT1P04264 644 aa4.84□□□□□ -1.63
DEPDC4-204ENST00000547823 INHBBP09529 407 aa4.84□□□□□ -1.63
DEPDC4-204ENST00000547823 ARHGAP4P98171 946 aa4.84□□□□□ -1.63
DEPDC4-204ENST00000547823 LRRC14Q15048 493 aa4.84□□□□□ -1.63
DEPDC4-204ENST00000547823 ECM1Q16610 540 aa4.84□□□□□ -1.63
DEPDC4-204ENST00000547823 SFRP5Q5T4F7 317 aa4.84□□□□□ -1.63
DEPDC4-204ENST00000547823 ZBTB37Q5TC79 503 aa4.84□□□□□ -1.63
DEPDC4-204ENST00000547823 ARMCX6Q7L4S7 300 aa4.84□□□□□ -1.63
DEPDC4-204ENST00000547823 ZNF507Q8TCN5 953 aa4.84□□□□□ -1.63
DEPDC4-204ENST00000547823 TMC1Q8TDI8 760 aa4.84□□□□□ -1.63
DEPDC4-204ENST00000547823 ALPK1Q96QP1 1244 aa4.84□□□□□ -1.63
DEPDC4-204ENST00000547823 DIRC2Q96SL1 478 aa4.84□□□□□ -1.63
DEPDC4-204ENST00000547823 CBX8Q9HC52 389 aa4.84□□□□□ -1.63
DEPDC4-204ENST00000547823 NTF4P34130 210 aa4.83□□□□□ -1.64
DEPDC4-204ENST00000547823 RING1Q06587 406 aa4.83□□□□□ -1.64
DEPDC4-204ENST00000547823 PPM1JQ5JR12 505 aa4.83□□□□□ -1.64
DEPDC4-204ENST00000547823 ATG14Q6ZNE5 492 aa4.83□□□□□ -1.64
DEPDC4-204ENST00000547823 MFSD2AQ8NA29 543 aa4.83□□□□□ -1.64
DEPDC4-204ENST00000547823 ABHD4Q8TB40 342 aa4.83□□□□□ -1.64
DEPDC4-204ENST00000547823 SEMA3GQ9NS98 782 aa4.83□□□□□ -1.64
DEPDC4-204ENST00000547823 C19orf73Q9NVV2 129 aa4.83□□□□□ -1.64
DEPDC4-204ENST00000547823 PPM1HQ9ULR3 514 aa4.83□□□□□ -1.64
DEPDC4-204ENST00000547823 TPX2Q9ULW0 747 aaKnown RBP4.83□□□□□ -1.64
DEPDC4-204ENST00000547823 GPR182O15218 404 aa4.82□□□□□ -1.64
DEPDC4-204ENST00000547823 CYP7A1P22680 504 aa4.82□□□□□ -1.64
DEPDC4-204ENST00000547823 CAP2P40123 477 aa4.82□□□□□ -1.64
DEPDC4-204ENST00000547823 BUD31P41223 144 aaPredicted RBP4.82□□□□□ -1.64
DEPDC4-204ENST00000547823 KIR3DL1P43629 444 aa4.82□□□□□ -1.64
DEPDC4-204ENST00000547823 TMPRSS7Q7RTY8 843 aa4.82□□□□□ -1.64
DEPDC4-204ENST00000547823 HSPA12BQ96MM6 686 aa4.82□□□□□ -1.64
DEPDC4-204ENST00000547823 RBCK1Q9BYM8 510 aa4.82□□□□□ -1.64
DEPDC4-204ENST00000547823 KRTAP9-3Q9BYQ3 159 aa4.82□□□□□ -1.64
DEPDC4-204ENST00000547823 SRCIN1Q9C0H9 1055 aa4.82□□□□□ -1.64
DEPDC4-204ENST00000547823 NIF3L1Q9GZT8 377 aa4.82□□□□□ -1.64
DEPDC4-204ENST00000547823 ATP13A1Q9HD20 1204 aa4.82□□□□□ -1.64
DEPDC4-204ENST00000547823 AKAP2Q9Y2D5 859 aa4.82□□□□□ -1.64
DEPDC4-204ENST00000547823 NUAK1O60285 661 aa4.81□□□□□ -1.64
DEPDC4-204ENST00000547823 LINC00310P59036 64 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms