RNA–Protein interactions for RNA: ENST00000547715.1

PTPRB-205, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-205ENST00000547715 EYSQ5T1H1 3165 aa18.05■□□□□ 0.48
PTPRB-205ENST00000547715 FAM196BA6NMK8 535 aa18.05■□□□□ 0.48
PTPRB-205ENST00000547715 BTDP43251 543 aa18.05■□□□□ 0.48
PTPRB-205ENST00000547715 HMGCS2P54868 508 aa18.05■□□□□ 0.48
PTPRB-205ENST00000547715 SLF2Q8IX21 1173 aa18.05■□□□□ 0.48
PTPRB-205ENST00000547715 MRPL50Q8N5N7 158 aaKnown RBP18.05■□□□□ 0.48
PTPRB-205ENST00000547715 COL25A1Q9BXS0 654 aaPredicted RBP18.05■□□□□ 0.48
PTPRB-205ENST00000547715 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.05■□□□□ 0.48
PTPRB-205ENST00000547715 PABPC4Q13310 644 aaKnown RBP eCLIP18.04■□□□□ 0.48
PTPRB-205ENST00000547715 ZNF280CQ8ND82 737 aa18.04■□□□□ 0.48
PTPRB-205ENST00000547715 TRIB2Q92519 343 aa18.04■□□□□ 0.48
PTPRB-205ENST00000547715 ASCC2Q9H1I8 757 aaPredicted RBP18.04■□□□□ 0.48
PTPRB-205ENST00000547715 OGDHLQ9ULD0 1010 aa18.04■□□□□ 0.48
PTPRB-205ENST00000547715 PFASO15067 1338 aa18.03■□□□□ 0.48
PTPRB-205ENST00000547715 CYP2B6P20813 491 aa18.03■□□□□ 0.48
PTPRB-205ENST00000547715 CCDC102BQ68D86 513 aa18.03■□□□□ 0.48
PTPRB-205ENST00000547715 FBXO3Q9UK99 471 aa18.03■□□□□ 0.48
PTPRB-205ENST00000547715 TBC1D12O60347 775 aa18.02■□□□□ 0.48
PTPRB-205ENST00000547715 CIAO1O76071 339 aa18.02■□□□□ 0.48
PTPRB-205ENST00000547715 PRKAR2AP13861 404 aaKnown RBP18.02■□□□□ 0.48
PTPRB-205ENST00000547715 ADORA1P30542 326 aa18.02■□□□□ 0.48
PTPRB-205ENST00000547715 FAM163AQ96GL9 167 aaPredicted RBP18.02■□□□□ 0.48
PTPRB-205ENST00000547715 OSBPL5Q9H0X9 879 aaPredicted RBP18.02■□□□□ 0.48
PTPRB-205ENST00000547715 MROH7-TTC4A0A0A0MT08 1334 aa18.01■□□□□ 0.47
PTPRB-205ENST00000547715 RASGRF1Q13972 1273 aa18.01■□□□□ 0.47
PTPRB-205ENST00000547715 SPTY2D1Q68D10 685 aaPredicted RBP18.01■□□□□ 0.47
PTPRB-205ENST00000547715 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.01■□□□□ 0.47
PTPRB-205ENST00000547715 IL15P40933 162 aaPredicted RBP18■□□□□ 0.47
PTPRB-205ENST00000547715 MDM2Q00987 491 aaPredicted RBP18■□□□□ 0.47
PTPRB-205ENST00000547715 MAP3K21Q5TCX8 1036 aa18■□□□□ 0.47
PTPRB-205ENST00000547715 TBC1D2Q9BYX2 928 aa18■□□□□ 0.47
PTPRB-205ENST00000547715 MORF4L1Q9UBU8 362 aa18■□□□□ 0.47
PTPRB-205ENST00000547715 GPR75-ASB3A0A0A6YYF3 556 aa17.99■□□□□ 0.47
PTPRB-205ENST00000547715 USP17L5A8MUK1 530 aa17.99■□□□□ 0.47
PTPRB-205ENST00000547715 CAP2P40123 477 aa17.99■□□□□ 0.47
PTPRB-205ENST00000547715 RHBDL3P58872 404 aa17.99■□□□□ 0.47
PTPRB-205ENST00000547715 IRX3P78415 501 aaPredicted RBP17.99■□□□□ 0.47
PTPRB-205ENST00000547715 MECOMQ03112 1051 aa17.99■□□□□ 0.47
PTPRB-205ENST00000547715 NUDT12Q9BQG2 462 aa17.99■□□□□ 0.47
PTPRB-205ENST00000547715 FRMPD3Q5JV73 1810 aa17.98■□□□□ 0.47
PTPRB-205ENST00000547715 PEX10O60683 326 aa17.98■□□□□ 0.47
PTPRB-205ENST00000547715 UBTFL1P0CB47 393 aaPredicted RBP17.98■□□□□ 0.47
PTPRB-205ENST00000547715 COL6A1P12109 1028 aa17.98■□□□□ 0.47
PTPRB-205ENST00000547715 TIMM10P62072 90 aa17.98■□□□□ 0.47
PTPRB-205ENST00000547715 SH3D19Q5HYK7 790 aa17.98■□□□□ 0.47
PTPRB-205ENST00000547715 ERICH6Q7L0X2 663 aa17.98■□□□□ 0.47
PTPRB-205ENST00000547715 SOCS4Q8WXH5 440 aa17.98■□□□□ 0.47
PTPRB-205ENST00000547715 SSH1Q8WYL5 1049 aa17.98■□□□□ 0.47
PTPRB-205ENST00000547715 AS3MTQ9HBK9 375 aa17.98■□□□□ 0.47
PTPRB-205ENST00000547715 PA2G4Q9UQ80 394 aaKnown RBP17.98■□□□□ 0.47
PTPRB-205ENST00000547715 PRUNE2Q8WUY3 3088 aa17.98■□□□□ 0.47
PTPRB-205ENST00000547715 PDS5AQ29RF7 1337 aaKnown RBP17.98■□□□□ 0.47
PTPRB-205ENST00000547715 SPTBN5Q9NRC6 3674 aaKnown RBP17.97■□□□□ 0.47
PTPRB-205ENST00000547715 ZBTB22O15209 634 aa17.97■□□□□ 0.47
PTPRB-205ENST00000547715 NPM3O75607 178 aaKnown RBP17.97■□□□□ 0.47
PTPRB-205ENST00000547715 XRCC5P13010 732 aaKnown RBP17.97■□□□□ 0.47
PTPRB-205ENST00000547715 ZKSCAN1P17029 563 aaPredicted RBP17.97■□□□□ 0.47
PTPRB-205ENST00000547715 CACNB2Q08289 660 aaPredicted RBP17.97■□□□□ 0.47
PTPRB-205ENST00000547715 RRP1BQ14684 758 aaKnown RBP17.97■□□□□ 0.47
PTPRB-205ENST00000547715 LRRC26Q2I0M4 334 aa17.97■□□□□ 0.47
PTPRB-205ENST00000547715 FAM161BQ96MY7 647 aa17.97■□□□□ 0.47
PTPRB-205ENST00000547715 COL2A1P02458 1487 aaPredicted RBP17.96■□□□□ 0.47
PTPRB-205ENST00000547715 POTEB2H3BUK9 544 aa17.96■□□□□ 0.47
PTPRB-205ENST00000547715 MTMR2Q13614 643 aa17.96■□□□□ 0.47
PTPRB-205ENST00000547715 PDE3AQ14432 1141 aa17.96■□□□□ 0.47
PTPRB-205ENST00000547715 GPRC5AQ8NFJ5 357 aa17.96■□□□□ 0.47
PTPRB-205ENST00000547715 ZNF384Q8TF68 577 aa17.96■□□□□ 0.47
PTPRB-205ENST00000547715 GUCD1Q96NT3 240 aa17.96■□□□□ 0.47
PTPRB-205ENST00000547715 P2RX7Q99572 595 aaKnown RBP17.96■□□□□ 0.47
PTPRB-205ENST00000547715 TMOD4Q9NZQ9 345 aa17.96■□□□□ 0.47
PTPRB-205ENST00000547715 CCND3P30281 292 aaPredicted RBP17.95■□□□□ 0.46
PTPRB-205ENST00000547715 HERVK_113P62684 666 aa17.95■□□□□ 0.46
PTPRB-205ENST00000547715 CCAR1Q8IX12 1150 aaKnown RBP17.95■□□□□ 0.46
PTPRB-205ENST00000547715 TRMT44Q8IYL2 757 aaKnown RBP17.95■□□□□ 0.46
PTPRB-205ENST00000547715 FAM9BQ8IZU0 186 aa17.95■□□□□ 0.46
PTPRB-205ENST00000547715 TXNRD2Q9NNW7 524 aa17.95■□□□□ 0.46
PTPRB-205ENST00000547715 CDH23Q9H251 3354 aa17.94■□□□□ 0.46
PTPRB-205ENST00000547715 MAST2Q6P0Q8 1798 aa17.94■□□□□ 0.46
PTPRB-205ENST00000547715 SIPA1L1O43166 1804 aa17.94■□□□□ 0.46
PTPRB-205ENST00000547715 A0A1B0GUL7 405 aa17.94■□□□□ 0.46
PTPRB-205ENST00000547715 LDHCP07864 332 aa17.94■□□□□ 0.46
PTPRB-205ENST00000547715 MAPK4P31152 587 aa17.94■□□□□ 0.46
PTPRB-205ENST00000547715 BACE1P56817 501 aa17.94■□□□□ 0.46
PTPRB-205ENST00000547715 CCL14Q16627 93 aa17.94■□□□□ 0.46
PTPRB-205ENST00000547715 LHX8Q68G74 356 aa17.94■□□□□ 0.46
PTPRB-205ENST00000547715 FAM109BQ6ICB4 259 aaPredicted RBP17.94■□□□□ 0.46
PTPRB-205ENST00000547715 XAGE2Q96GT9 111 aa17.94■□□□□ 0.46
PTPRB-205ENST00000547715 LBHD1Q9BQE6 289 aaPredicted RBP17.94■□□□□ 0.46
PTPRB-205ENST00000547715 HERC5Q9UII4 1024 aaKnown RBP17.94■□□□□ 0.46
PTPRB-205ENST00000547715 MAP4K4O95819 1239 aaPredicted RBP17.93■□□□□ 0.46
PTPRB-205ENST00000547715 HOXA7P31268 230 aaPredicted RBP17.93■□□□□ 0.46
PTPRB-205ENST00000547715 GSTO1P78417 241 aa17.93■□□□□ 0.46
PTPRB-205ENST00000547715 MVPQ14764 893 aaKnown RBP17.93■□□□□ 0.46
PTPRB-205ENST00000547715 NSUN4Q96CB9 384 aaKnown RBP17.93■□□□□ 0.46
PTPRB-205ENST00000547715 WDR18Q9BV38 432 aa17.93■□□□□ 0.46
PTPRB-205ENST00000547715 COPRSQ9NQ92 184 aa17.93■□□□□ 0.46
PTPRB-205ENST00000547715 RBPJLQ9UBG7 517 aa17.93■□□□□ 0.46
PTPRB-205ENST00000547715 ASNSP08243 561 aa17.92■□□□□ 0.46
PTPRB-205ENST00000547715 RGS2P41220 211 aa17.92■□□□□ 0.46
PTPRB-205ENST00000547715 Q3C1V9 767 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms