RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 SNCAIPQ9Y6H5 919 aa20.57■□□□□ 0.88
RBFOX1-207ENST00000547338 DDTLA6NHG4 134 aaPredicted RBP20.56■□□□□ 0.88
RBFOX1-207ENST00000547338 GSTO1P78417 241 aa20.56■□□□□ 0.88
RBFOX1-207ENST00000547338 MAP3K9P80192 1104 aa20.56■□□□□ 0.88
RBFOX1-207ENST00000547338 TSHZ3Q63HK5 1081 aa20.56■□□□□ 0.88
RBFOX1-207ENST00000547338 AK9Q5TCS8 1911 aa20.56■□□□□ 0.88
RBFOX1-207ENST00000547338 GOLGA6L22H0YM25 854 aa20.55■□□□□ 0.88
RBFOX1-207ENST00000547338 TNS4Q8IZW8 715 aa20.55■□□□□ 0.88
RBFOX1-207ENST00000547338 TNPO1Q92973 898 aaKnown RBP20.55■□□□□ 0.88
RBFOX1-207ENST00000547338 ZKSCAN4Q969J2 545 aaPredicted RBP20.55■□□□□ 0.88
RBFOX1-207ENST00000547338 OPTNQ96CV9 577 aa20.55■□□□□ 0.88
RBFOX1-207ENST00000547338 INTS4Q96HW7 963 aaKnown RBP20.55■□□□□ 0.88
RBFOX1-207ENST00000547338 WRNIP1Q96S55 665 aa20.55■□□□□ 0.88
RBFOX1-207ENST00000547338 ZNF112Q9UJU3 913 aa20.55■□□□□ 0.88
RBFOX1-207ENST00000547338 FOCADQ5VW36 1801 aa20.54■□□□□ 0.88
RBFOX1-207ENST00000547338 LDHCP07864 332 aa20.54■□□□□ 0.88
RBFOX1-207ENST00000547338 INPP5BP32019 993 aa20.54■□□□□ 0.88
RBFOX1-207ENST00000547338 IFFO2Q5TF58 517 aa20.54■□□□□ 0.88
RBFOX1-207ENST00000547338 NAA16Q6N069 864 aaPredicted RBP20.54■□□□□ 0.88
RBFOX1-207ENST00000547338 SH3RF3Q8TEJ3 882 aaPredicted RBP20.54■□□□□ 0.88
RBFOX1-207ENST00000547338 MS4A4AQ96JQ5 239 aa20.54■□□□□ 0.88
RBFOX1-207ENST00000547338 R3HDMLQ9H3Y0 253 aa20.54■□□□□ 0.88
RBFOX1-207ENST00000547338 ISY1Q9ULR0 285 aaKnown RBP20.54■□□□□ 0.88
RBFOX1-207ENST00000547338 SIPA1L1O43166 1804 aa20.54■□□□□ 0.88
RBFOX1-207ENST00000547338 IGF2BP3O00425 579 aaKnown RBP eCLIP20.53■□□□□ 0.88
RBFOX1-207ENST00000547338 NPM3O75607 178 aaKnown RBP20.53■□□□□ 0.88
RBFOX1-207ENST00000547338 MAP3K10Q02779 954 aa20.53■□□□□ 0.88
RBFOX1-207ENST00000547338 PICALMQ13492 652 aa20.53■□□□□ 0.88
RBFOX1-207ENST00000547338 RAD50Q92878 1312 aa20.53■□□□□ 0.88
RBFOX1-207ENST00000547338 NEK4P51957 841 aa20.53■□□□□ 0.88
RBFOX1-207ENST00000547338 PPP4CP60510 307 aa20.53■□□□□ 0.88
RBFOX1-207ENST00000547338 DCAF15Q66K64 600 aa20.53■□□□□ 0.88
RBFOX1-207ENST00000547338 HOOK2Q96ED9 719 aa20.53■□□□□ 0.88
RBFOX1-207ENST00000547338 PTPN18Q99952 460 aa20.53■□□□□ 0.88
RBFOX1-207ENST00000547338 ZNF341Q9BYN7 854 aa20.53■□□□□ 0.88
RBFOX1-207ENST00000547338 DIAPH3Q9NSV4 1193 aa20.53■□□□□ 0.88
RBFOX1-207ENST00000547338 COL2A1P02458 1487 aaPredicted RBP20.52■□□□□ 0.88
RBFOX1-207ENST00000547338 TESPA1A2RU30 521 aaPredicted RBP20.52■□□□□ 0.87
RBFOX1-207ENST00000547338 MANSC4A6NHS7 340 aaPredicted RBP20.52■□□□□ 0.87
RBFOX1-207ENST00000547338 SPDYE5A6NIY4 337 aa20.52■□□□□ 0.87
RBFOX1-207ENST00000547338 PHF20L1A8MW92 1017 aa20.52■□□□□ 0.87
RBFOX1-207ENST00000547338 SREBF2Q12772 1141 aa20.52■□□□□ 0.87
RBFOX1-207ENST00000547338 CUL4AQ13619 759 aa20.52■□□□□ 0.87
RBFOX1-207ENST00000547338 L1TD1Q5T7N2 865 aaKnown RBP20.52■□□□□ 0.87
RBFOX1-207ENST00000547338 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.52■□□□□ 0.87
RBFOX1-207ENST00000547338 EDC3Q96F86 508 aaKnown RBP20.52■□□□□ 0.87
RBFOX1-207ENST00000547338 AATFQ9NY61 560 aaKnown RBP eCLIP20.52■□□□□ 0.87
RBFOX1-207ENST00000547338 TRAK2O60296 914 aa20.51■□□□□ 0.87
RBFOX1-207ENST00000547338 IDH1O75874 414 aaKnown RBP20.51■□□□□ 0.87
RBFOX1-207ENST00000547338 TBC1D8O95759 1140 aa20.51■□□□□ 0.87
RBFOX1-207ENST00000547338 MAP4K4O95819 1239 aaPredicted RBP20.51■□□□□ 0.87
RBFOX1-207ENST00000547338 IFNL1Q8IU54 200 aa20.51■□□□□ 0.87
RBFOX1-207ENST00000547338 IGSF3O75054 1194 aa20.5■□□□□ 0.87
RBFOX1-207ENST00000547338 DYNLL1P63167 89 aaKnown RBP20.5■□□□□ 0.87
RBFOX1-207ENST00000547338 OTUD5Q96G74 571 aa20.5■□□□□ 0.87
RBFOX1-207ENST00000547338 CFHR5Q9BXR6 569 aa20.5■□□□□ 0.87
RBFOX1-207ENST00000547338 LSG1Q9H089 658 aaKnown RBP20.5■□□□□ 0.87
RBFOX1-207ENST00000547338 OSBPL5Q9H0X9 879 aaPredicted RBP20.5■□□□□ 0.87
RBFOX1-207ENST00000547338 CSADQ9Y600 493 aa20.5■□□□□ 0.87
RBFOX1-207ENST00000547338 NOL9Q5SY16 702 aaKnown RBP20.49■□□□□ 0.87
RBFOX1-207ENST00000547338 TEX11Q8IYF3 940 aa20.49■□□□□ 0.87
RBFOX1-207ENST00000547338 MAGEB6Q8N7X4 407 aa20.49■□□□□ 0.87
RBFOX1-207ENST00000547338 BRI3BPQ8WY22 251 aa20.49■□□□□ 0.87
RBFOX1-207ENST00000547338 KCNB2Q92953 911 aa20.49■□□□□ 0.87
RBFOX1-207ENST00000547338 ATP5JP18859 108 aa20.48■□□□□ 0.87
RBFOX1-207ENST00000547338 CYP7A1P22680 504 aa20.48■□□□□ 0.87
RBFOX1-207ENST00000547338 ERO1BQ86YB8 467 aa20.48■□□□□ 0.87
RBFOX1-207ENST00000547338 TM6SF1Q9BZW5 370 aa20.48■□□□□ 0.87
RBFOX1-207ENST00000547338 FAM196BA6NMK8 535 aa20.48■□□□□ 0.87
RBFOX1-207ENST00000547338 IRF6O14896 467 aa20.48■□□□□ 0.87
RBFOX1-207ENST00000547338 INHBEP58166 350 aa20.48■□□□□ 0.87
RBFOX1-207ENST00000547338 GOLIM4O00461 696 aa20.47■□□□□ 0.87
RBFOX1-207ENST00000547338 FLT1P17948 1338 aa20.47■□□□□ 0.87
RBFOX1-207ENST00000547338 ZSCAN29Q8IWY8 852 aaPredicted RBP20.47■□□□□ 0.87
RBFOX1-207ENST00000547338 MIGA1Q8NAN2 632 aa20.47■□□□□ 0.87
RBFOX1-207ENST00000547338 PHIPQ8WWQ0 1821 aa20.47■□□□□ 0.87
RBFOX1-207ENST00000547338 DNAJC2Q99543 621 aaKnown RBP20.47■□□□□ 0.87
RBFOX1-207ENST00000547338 BOLA2Q9H3K6 86 aa20.47■□□□□ 0.87
RBFOX1-207ENST00000547338 DOCK1Q14185 1865 aa20.46■□□□□ 0.87
RBFOX1-207ENST00000547338 DDX60LQ5H9U9 1706 aaKnown RBP20.46■□□□□ 0.87
RBFOX1-207ENST00000547338 TCRBV5S4A2TA0A5A2 114 aa20.46■□□□□ 0.87
RBFOX1-207ENST00000547338 BAG3O95817 575 aa20.46■□□□□ 0.87
RBFOX1-207ENST00000547338 PPIL2Q13356 520 aa20.46■□□□□ 0.87
RBFOX1-207ENST00000547338 RRP1BQ14684 758 aaKnown RBP20.46■□□□□ 0.87
RBFOX1-207ENST00000547338 TGFBRAP1Q8WUH2 860 aa20.46■□□□□ 0.87
RBFOX1-207ENST00000547338 TMX3Q96JJ7 454 aa20.46■□□□□ 0.87
RBFOX1-207ENST00000547338 HAUS7Q99871 368 aa20.46■□□□□ 0.87
RBFOX1-207ENST00000547338 CHGBP05060 677 aa20.45■□□□□ 0.86
RBFOX1-207ENST00000547338 PDIA4P13667 645 aaKnown RBP20.45■□□□□ 0.86
RBFOX1-207ENST00000547338 PDE6AP16499 860 aa20.45■□□□□ 0.86
RBFOX1-207ENST00000547338 MAP3K12Q12852 859 aa20.45■□□□□ 0.86
RBFOX1-207ENST00000547338 SLFNL1Q499Z3 407 aa20.45■□□□□ 0.86
RBFOX1-207ENST00000547338 MAPKAPK5Q8IW41 473 aa20.45■□□□□ 0.86
RBFOX1-207ENST00000547338 RIOK1Q9BRS2 568 aaKnown RBP20.45■□□□□ 0.86
RBFOX1-207ENST00000547338 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.45■□□□□ 0.86
RBFOX1-207ENST00000547338 CCL15-CCL14A0A0B4J2E2 113 aa20.44■□□□□ 0.86
RBFOX1-207ENST00000547338 TBC1D12O60347 775 aa20.44■□□□□ 0.86
RBFOX1-207ENST00000547338 PLCG2P16885 1265 aa20.44■□□□□ 0.86
RBFOX1-207ENST00000547338 GTF2A2P52657 109 aa20.44■□□□□ 0.86
RBFOX1-207ENST00000547338 MOGSQ13724 837 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms