RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 MORF4L1Q9UBU8 362 aa11.57□□□□□ -0.56
SSH1-205ENST00000546812 TBC1D12O60347 775 aa11.56□□□□□ -0.56
SSH1-205ENST00000546812 EXOSC9Q06265 439 aaKnown RBP11.56□□□□□ -0.56
SSH1-205ENST00000546812 CACNB2Q08289 660 aaPredicted RBP11.56□□□□□ -0.56
SSH1-205ENST00000546812 NCBP3Q53F19 620 aaKnown RBP11.56□□□□□ -0.56
SSH1-205ENST00000546812 TRMT44Q8IYL2 757 aaKnown RBP11.56□□□□□ -0.56
SSH1-205ENST00000546812 DOCK3Q8IZD9 2030 aa11.56□□□□□ -0.56
SSH1-205ENST00000546812 FAM9BQ8IZU0 186 aa11.56□□□□□ -0.56
SSH1-205ENST00000546812 ZNF280CQ8ND82 737 aa11.56□□□□□ -0.56
SSH1-205ENST00000546812 NUDT12Q9BQG2 462 aa11.56□□□□□ -0.56
SSH1-205ENST00000546812 CDH23Q9H251 3354 aa11.56□□□□□ -0.56
SSH1-205ENST00000546812 SALL1Q9NSC2 1324 aa11.56□□□□□ -0.56
SSH1-205ENST00000546812 COL9A1P20849 921 aa11.55□□□□□ -0.56
SSH1-205ENST00000546812 HMGCS2P54868 508 aa11.55□□□□□ -0.56
SSH1-205ENST00000546812 SOCS4Q8WXH5 440 aa11.55□□□□□ -0.56
SSH1-205ENST00000546812 TBC1D2Q9BYX2 928 aa11.55□□□□□ -0.56
SSH1-205ENST00000546812 DDX4Q9NQI0 724 aaKnown RBP11.55□□□□□ -0.56
SSH1-205ENST00000546812 GNL3LQ9NVN8 582 aaKnown RBP11.55□□□□□ -0.56
SSH1-205ENST00000546812 GAKO14976 1311 aa11.55□□□□□ -0.56
SSH1-205ENST00000546812 RFX7Q2KHR2 1363 aa11.54□□□□□ -0.56
SSH1-205ENST00000546812 EYA2O00167 538 aa11.54□□□□□ -0.56
SSH1-205ENST00000546812 ZKSCAN1P17029 563 aaPredicted RBP11.54□□□□□ -0.56
SSH1-205ENST00000546812 CCND3P30281 292 aaPredicted RBP11.54□□□□□ -0.56
SSH1-205ENST00000546812 SH3D19Q5HYK7 790 aa11.54□□□□□ -0.56
SSH1-205ENST00000546812 GPRC5AQ8NFJ5 357 aa11.54□□□□□ -0.56
SSH1-205ENST00000546812 USP6NLQ92738 828 aa11.54□□□□□ -0.56
SSH1-205ENST00000546812 FAM163AQ96GL9 167 aaPredicted RBP11.54□□□□□ -0.56
SSH1-205ENST00000546812 SENP6Q9GZR1 1112 aaPredicted RBP11.54□□□□□ -0.56
SSH1-205ENST00000546812 OSBPL5Q9H0X9 879 aaPredicted RBP11.54□□□□□ -0.56
SSH1-205ENST00000546812 DENND2AQ9ULE3 1009 aa11.54□□□□□ -0.56
SSH1-205ENST00000546812 DDX60LQ5H9U9 1706 aaKnown RBP11.54□□□□□ -0.56
SSH1-205ENST00000546812 SEMA3EO15041 775 aa11.53□□□□□ -0.56
SSH1-205ENST00000546812 PICALMQ13492 652 aa11.53□□□□□ -0.56
SSH1-205ENST00000546812 PDE3AQ14432 1141 aa11.53□□□□□ -0.56
SSH1-205ENST00000546812 WDR63Q8IWG1 891 aa11.53□□□□□ -0.56
SSH1-205ENST00000546812 MYLIPQ8WY64 445 aa11.53□□□□□ -0.56
SSH1-205ENST00000546812 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.53□□□□□ -0.56
SSH1-205ENST00000546812 PRKAG2Q9UGJ0 569 aa11.53□□□□□ -0.56
SSH1-205ENST00000546812 FAM196BA6NMK8 535 aa11.52□□□□□ -0.57
SSH1-205ENST00000546812 USP17L5A8MUK1 530 aa11.52□□□□□ -0.57
SSH1-205ENST00000546812 ZBTB22O15209 634 aa11.52□□□□□ -0.57
SSH1-205ENST00000546812 NPM3O75607 178 aaKnown RBP11.52□□□□□ -0.57
SSH1-205ENST00000546812 MAPK4P31152 587 aa11.52□□□□□ -0.57
SSH1-205ENST00000546812 HOXA7P31268 230 aaPredicted RBP11.52□□□□□ -0.57
SSH1-205ENST00000546812 IRX3P78415 501 aaPredicted RBP11.52□□□□□ -0.57
SSH1-205ENST00000546812 SHHQ15465 462 aa11.52□□□□□ -0.57
SSH1-205ENST00000546812 CCL14Q16627 93 aa11.52□□□□□ -0.57
SSH1-205ENST00000546812 SLF2Q8IX21 1173 aa11.52□□□□□ -0.57
SSH1-205ENST00000546812 ZGPATQ8N5A5 531 aaKnown RBP11.52□□□□□ -0.57
SSH1-205ENST00000546812 P2RX7Q99572 595 aaKnown RBP11.52□□□□□ -0.57
SSH1-205ENST00000546812 TTYH1Q9H313 450 aaPredicted RBP11.52□□□□□ -0.57
SSH1-205ENST00000546812 TXNRD2Q9NNW7 524 aa11.52□□□□□ -0.57
SSH1-205ENST00000546812 AK9Q5TCS8 1911 aa11.52□□□□□ -0.57
SSH1-205ENST00000546812 PEX10O60683 326 aa11.51□□□□□ -0.57
SSH1-205ENST00000546812 FOSL2P15408 326 aa11.51□□□□□ -0.57
SSH1-205ENST00000546812 CAP2P40123 477 aa11.51□□□□□ -0.57
SSH1-205ENST00000546812 RGS2P41220 211 aa11.51□□□□□ -0.57
SSH1-205ENST00000546812 BTDP43251 543 aa11.51□□□□□ -0.57
SSH1-205ENST00000546812 RFX5P48382 616 aaPredicted RBP11.51□□□□□ -0.57
SSH1-205ENST00000546812 HERVK_113P62684 666 aa11.51□□□□□ -0.57
SSH1-205ENST00000546812 SMAD3P84022 425 aaKnown RBP11.51□□□□□ -0.57
SSH1-205ENST00000546812 ATP2B3Q16720 1220 aa11.51□□□□□ -0.57
SSH1-205ENST00000546812 MORN1Q5T089 497 aa11.51□□□□□ -0.57
SSH1-205ENST00000546812 ATG9AQ7Z3C6 839 aa11.51□□□□□ -0.57
SSH1-205ENST00000546812 DZIP1Q86YF9 867 aaKnown RBP11.51□□□□□ -0.57
SSH1-205ENST00000546812 AS3MTQ9HBK9 375 aa11.51□□□□□ -0.57
SSH1-205ENST00000546812 RBPJLQ9UBG7 517 aa11.51□□□□□ -0.57
SSH1-205ENST00000546812 CACNA1FO60840 1977 aa11.5□□□□□ -0.57
SSH1-205ENST00000546812 GPR75-ASB3A0A0A6YYF3 556 aa11.5□□□□□ -0.57
SSH1-205ENST00000546812 TNFRSF10AO00220 468 aa11.5□□□□□ -0.57
SSH1-205ENST00000546812 PHKA1P46020 1223 aa11.5□□□□□ -0.57
SSH1-205ENST00000546812 ATN1P54259 1190 aaPredicted RBP11.5□□□□□ -0.57
SSH1-205ENST00000546812 RHBDL3P58872 404 aa11.5□□□□□ -0.57
SSH1-205ENST00000546812 RRP1BQ14684 758 aaKnown RBP11.5□□□□□ -0.57
SSH1-205ENST00000546812 Q3C1V9 767 aa11.5□□□□□ -0.57
SSH1-205ENST00000546812 TJAP1Q5JTD0 557 aa11.5□□□□□ -0.57
SSH1-205ENST00000546812 C9orf50Q5SZB4 431 aa11.5□□□□□ -0.57
SSH1-205ENST00000546812 GPR142Q7Z601 462 aa11.5□□□□□ -0.57
SSH1-205ENST00000546812 PLEKHH3Q7Z736 793 aa11.5□□□□□ -0.57
SSH1-205ENST00000546812 CCAR1Q8IX12 1150 aaKnown RBP11.5□□□□□ -0.57
SSH1-205ENST00000546812 APBA2Q99767 749 aa11.5□□□□□ -0.57
SSH1-205ENST00000546812 WDR18Q9BV38 432 aa11.5□□□□□ -0.57
SSH1-205ENST00000546812 USP44Q9H0E7 712 aa11.5□□□□□ -0.57
SSH1-205ENST00000546812 CEP126Q9P2H0 1117 aa11.5□□□□□ -0.57
SSH1-205ENST00000546812 DNM1LO00429 736 aa11.49□□□□□ -0.57
SSH1-205ENST00000546812 MSCO60682 206 aa11.49□□□□□ -0.57
SSH1-205ENST00000546812 BACE1P56817 501 aa11.49□□□□□ -0.57
SSH1-205ENST00000546812 RTP1P59025 263 aa11.49□□□□□ -0.57
SSH1-205ENST00000546812 ERVK-9P63128 1117 aa11.49□□□□□ -0.57
SSH1-205ENST00000546812 ERVK-24P63145 666 aa11.49□□□□□ -0.57
SSH1-205ENST00000546812 MTMR2Q13614 643 aa11.49□□□□□ -0.57
SSH1-205ENST00000546812 SPTY2D1Q68D10 685 aaPredicted RBP11.49□□□□□ -0.57
SSH1-205ENST00000546812 LPAR1Q92633 364 aa11.49□□□□□ -0.57
SSH1-205ENST00000546812 PORCNQ9H237 461 aa11.49□□□□□ -0.57
SSH1-205ENST00000546812 TMOD4Q9NZQ9 345 aa11.49□□□□□ -0.57
SSH1-205ENST00000546812 ABCF2Q9UG63 623 aa11.49□□□□□ -0.57
SSH1-205ENST00000546812 DDX20Q9UHI6 824 aaKnown RBP11.49□□□□□ -0.57
SSH1-205ENST00000546812 FBXO3Q9UK99 471 aa11.49□□□□□ -0.57
SSH1-205ENST00000546812 MROH7-TTC4A0A0A0MT08 1334 aa11.49□□□□□ -0.57
SSH1-205ENST00000546812 PTPRFP10586 1907 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms