RNA–Protein interactions for RNA: ENST00000546653.5

VDR-203, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-203ENST00000546653 ENTPD3O75355 529 aa16.73■□□□□ 0.27
VDR-203ENST00000546653 SHHQ15465 462 aa16.73■□□□□ 0.27
VDR-203ENST00000546653 WDR63Q8IWG1 891 aa16.73■□□□□ 0.27
VDR-203ENST00000546653 ASCC2Q9H1I8 757 aaPredicted RBP16.73■□□□□ 0.27
VDR-203ENST00000546653 SPINK5Q9NQ38 1064 aaPredicted RBP16.73■□□□□ 0.27
VDR-203ENST00000546653 MORF4L1Q9UBU8 362 aa16.73■□□□□ 0.27
VDR-203ENST00000546653 PEX10O60683 326 aa16.72■□□□□ 0.27
VDR-203ENST00000546653 XRCC5P13010 732 aaKnown RBP16.72■□□□□ 0.27
VDR-203ENST00000546653 FOSL2P15408 326 aa16.72■□□□□ 0.27
VDR-203ENST00000546653 PLA2G5P39877 138 aa16.72■□□□□ 0.27
VDR-203ENST00000546653 C9orf50Q5SZB4 431 aa16.72■□□□□ 0.27
VDR-203ENST00000546653 RLFQ13129 1914 aa16.71■□□□□ 0.27
VDR-203ENST00000546653 NBPF7P0C2Y1 421 aaPredicted RBP16.71■□□□□ 0.27
VDR-203ENST00000546653 EXOSC9Q06265 439 aaKnown RBP16.71■□□□□ 0.27
VDR-203ENST00000546653 SPP2Q13103 211 aa16.71■□□□□ 0.27
VDR-203ENST00000546653 RABL6Q3YEC7 729 aaPredicted RBP16.71■□□□□ 0.27
VDR-203ENST00000546653 TJAP1Q5JTD0 557 aa16.71■□□□□ 0.27
VDR-203ENST00000546653 ANKRD44Q8N8A2 993 aa16.71■□□□□ 0.27
VDR-203ENST00000546653 KLHDC4Q8TBB5 520 aa16.71■□□□□ 0.27
VDR-203ENST00000546653 USP6NLQ92738 828 aa16.71■□□□□ 0.27
VDR-203ENST00000546653 BICC1Q9H694 974 aaKnown RBP16.71■□□□□ 0.27
VDR-203ENST00000546653 DDX4Q9NQI0 724 aaKnown RBP16.71■□□□□ 0.27
VDR-203ENST00000546653 ALDH1L1O75891 902 aa16.7■□□□□ 0.26
VDR-203ENST00000546653 IFIT1P09914 478 aaKnown RBP16.7■□□□□ 0.26
VDR-203ENST00000546653 HMGCS2P54868 508 aa16.7■□□□□ 0.26
VDR-203ENST00000546653 PUM3Q15397 648 aaKnown RBP16.7■□□□□ 0.26
VDR-203ENST00000546653 CCL14Q16627 93 aa16.7■□□□□ 0.26
VDR-203ENST00000546653 ZSCAN29Q8IWY8 852 aaPredicted RBP16.7■□□□□ 0.26
VDR-203ENST00000546653 USP38Q8NB14 1042 aa16.7■□□□□ 0.26
VDR-203ENST00000546653 NUDT12Q9BQG2 462 aa16.7■□□□□ 0.26
VDR-203ENST00000546653 SENP6Q9GZR1 1112 aaPredicted RBP16.7■□□□□ 0.26
VDR-203ENST00000546653 MYO9BQ13459 2157 aa16.7■□□□□ 0.26
VDR-203ENST00000546653 LDHBP07195 334 aaKnown RBP16.69■□□□□ 0.26
VDR-203ENST00000546653 ZKSCAN1P17029 563 aaPredicted RBP16.69■□□□□ 0.26
VDR-203ENST00000546653 ZEB1P37275 1124 aaPredicted RBP16.69■□□□□ 0.26
VDR-203ENST00000546653 SMAD3P84022 425 aaKnown RBP16.69■□□□□ 0.26
VDR-203ENST00000546653 ZNF280CQ8ND82 737 aa16.69■□□□□ 0.26
VDR-203ENST00000546653 SOCS4Q8WXH5 440 aa16.69■□□□□ 0.26
VDR-203ENST00000546653 TXNRD2Q9NNW7 524 aa16.69■□□□□ 0.26
VDR-203ENST00000546653 UTYO14607 1347 aa16.69■□□□□ 0.26
VDR-203ENST00000546653 FAM196BA6NMK8 535 aa16.68■□□□□ 0.26
VDR-203ENST00000546653 ATN1P54259 1190 aaPredicted RBP16.68■□□□□ 0.26
VDR-203ENST00000546653 PABPC4Q13310 644 aaKnown RBP eCLIP16.68■□□□□ 0.26
VDR-203ENST00000546653 CHD9Q3L8U1 2897 aa16.68■□□□□ 0.26
VDR-203ENST00000546653 GAKO14976 1311 aa16.68■□□□□ 0.26
VDR-203ENST00000546653 RRP1BQ14684 758 aaKnown RBP16.67■□□□□ 0.26
VDR-203ENST00000546653 SH3D19Q5HYK7 790 aa16.67■□□□□ 0.26
VDR-203ENST00000546653 TRMT44Q8IYL2 757 aaKnown RBP16.67■□□□□ 0.26
VDR-203ENST00000546653 SRCIN1Q9C0H9 1055 aa16.67■□□□□ 0.26
VDR-203ENST00000546653 SALL1Q9NSC2 1324 aa16.67■□□□□ 0.26
VDR-203ENST00000546653 TBC1D12O60347 775 aa16.66■□□□□ 0.26
VDR-203ENST00000546653 RTP1P59025 263 aa16.66■□□□□ 0.26
VDR-203ENST00000546653 PICALMQ13492 652 aa16.66■□□□□ 0.26
VDR-203ENST00000546653 MORN1Q5T089 497 aa16.66■□□□□ 0.26
VDR-203ENST00000546653 SLC4A10Q6U841 1118 aa16.66■□□□□ 0.26
VDR-203ENST00000546653 FAM122AQ96E09 287 aa16.66■□□□□ 0.26
VDR-203ENST00000546653 P2RX7Q99572 595 aaKnown RBP16.66■□□□□ 0.26
VDR-203ENST00000546653 SALL2Q9Y467 1007 aaPredicted RBP16.66■□□□□ 0.26
VDR-203ENST00000546653 REV3LO60673 3130 aa16.65■□□□□ 0.26
VDR-203ENST00000546653 SLC5A1P13866 664 aa16.65■□□□□ 0.26
VDR-203ENST00000546653 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
VDR-203ENST00000546653 Q3C1V9 767 aa16.65■□□□□ 0.26
VDR-203ENST00000546653 GPRC5AQ8NFJ5 357 aa16.65■□□□□ 0.26
VDR-203ENST00000546653 LPIN2Q92539 896 aa16.65■□□□□ 0.26
VDR-203ENST00000546653 OSBPL5Q9H0X9 879 aaPredicted RBP16.65■□□□□ 0.26
VDR-203ENST00000546653 PORCNQ9H237 461 aa16.65■□□□□ 0.26
VDR-203ENST00000546653 MRS2Q9HD23 443 aa16.65■□□□□ 0.26
VDR-203ENST00000546653 RBPJLQ9UBG7 517 aa16.65■□□□□ 0.26
VDR-203ENST00000546653 PRKAG2Q9UGJ0 569 aa16.65■□□□□ 0.26
VDR-203ENST00000546653 PIEZO1Q92508 2521 aa16.65■□□□□ 0.26
VDR-203ENST00000546653 TMEM265A0A087WTH1 108 aa16.64■□□□□ 0.25
VDR-203ENST00000546653 RGS2P41220 211 aa16.64■□□□□ 0.25
VDR-203ENST00000546653 POTEEQ6S8J3 1075 aa16.64■□□□□ 0.25
VDR-203ENST00000546653 BADQ92934 168 aa16.64■□□□□ 0.25
VDR-203ENST00000546653 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.64■□□□□ 0.25
VDR-203ENST00000546653 MAPK4P31152 587 aa16.63■□□□□ 0.25
VDR-203ENST00000546653 HOXA7P31268 230 aaPredicted RBP16.63■□□□□ 0.25
VDR-203ENST00000546653 HERVK_113P62684 666 aa16.63■□□□□ 0.25
VDR-203ENST00000546653 IRX3P78415 501 aaPredicted RBP16.63■□□□□ 0.25
VDR-203ENST00000546653 PDE3AQ14432 1141 aa16.63■□□□□ 0.25
VDR-203ENST00000546653 GRIN2CQ14957 1233 aa16.63■□□□□ 0.25
VDR-203ENST00000546653 GPR142Q7Z601 462 aa16.63■□□□□ 0.25
VDR-203ENST00000546653 APBA2Q99767 749 aa16.63■□□□□ 0.25
VDR-203ENST00000546653 TBC1D2Q9BYX2 928 aa16.63■□□□□ 0.25
VDR-203ENST00000546653 FLRT1Q9NZU1 646 aa16.63■□□□□ 0.25
VDR-203ENST00000546653 ATP11BQ9Y2G3 1177 aa16.63■□□□□ 0.25
VDR-203ENST00000546653 XIRP2A4UGR9 3374 aa16.63■□□□□ 0.25
VDR-203ENST00000546653 SIPA1L1O43166 1804 aa16.62■□□□□ 0.25
VDR-203ENST00000546653 USP17L5A8MUK1 530 aa16.62■□□□□ 0.25
VDR-203ENST00000546653 CAP2P40123 477 aa16.62■□□□□ 0.25
VDR-203ENST00000546653 BTDP43251 543 aa16.62■□□□□ 0.25
VDR-203ENST00000546653 LPAR1Q92633 364 aa16.62■□□□□ 0.25
VDR-203ENST00000546653 FAM163AQ96GL9 167 aaPredicted RBP16.62■□□□□ 0.25
VDR-203ENST00000546653 DDX20Q9UHI6 824 aaKnown RBP16.62■□□□□ 0.25
VDR-203ENST00000546653 EYA2O00167 538 aa16.61■□□□□ 0.25
VDR-203ENST00000546653 DNM1LO00429 736 aa16.61■□□□□ 0.25
VDR-203ENST00000546653 RFX5P48382 616 aaPredicted RBP16.61■□□□□ 0.25
VDR-203ENST00000546653 RHBDL3P58872 404 aa16.61■□□□□ 0.25
VDR-203ENST00000546653 ERVK-9P63128 1117 aa16.61■□□□□ 0.25
VDR-203ENST00000546653 ERVK-24P63145 666 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms