RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.03■□□□□ -0
BRF1-207ENST00000546417 MORF4L1Q9UBU8 362 aa15.03■□□□□ -0
BRF1-207ENST00000546417 TTC28Q96AY4 2481 aa15.03■□□□□ -0
BRF1-207ENST00000546417 PRUNE2Q8WUY3 3088 aa15.02■□□□□ -0
BRF1-207ENST00000546417 TBC1D12O60347 775 aa15.02■□□□□ -0
BRF1-207ENST00000546417 COL9A1P20849 921 aa15.02■□□□□ -0
BRF1-207ENST00000546417 EXOSC9Q06265 439 aaKnown RBP15.02■□□□□ -0
BRF1-207ENST00000546417 CACNB2Q08289 660 aaPredicted RBP15.02■□□□□ -0
BRF1-207ENST00000546417 LHX8Q68G74 356 aa15.02■□□□□ -0
BRF1-207ENST00000546417 ZNF280CQ8ND82 737 aa15.02■□□□□ -0
BRF1-207ENST00000546417 KLHDC4Q8TBB5 520 aa15.02■□□□□ -0
BRF1-207ENST00000546417 OSBPL5Q9H0X9 879 aaPredicted RBP15.02■□□□□ -0
BRF1-207ENST00000546417 SEMA6BQ9H3T3 888 aa15.02■□□□□ -0
BRF1-207ENST00000546417 PRKAG2Q9UGJ0 569 aa15.02■□□□□ -0
BRF1-207ENST00000546417 SPTBN5Q9NRC6 3674 aaKnown RBP15.02□□□□□ -0.01
BRF1-207ENST00000546417 DNAH12Q6ZR08 3092 aa15.02□□□□□ -0.01
BRF1-207ENST00000546417 ZKSCAN1P17029 563 aaPredicted RBP15.01□□□□□ -0.01
BRF1-207ENST00000546417 HMGCS2P54868 508 aa15.01□□□□□ -0.01
BRF1-207ENST00000546417 PDE3AQ14432 1141 aa15.01□□□□□ -0.01
BRF1-207ENST00000546417 SLF2Q8IX21 1173 aa15.01□□□□□ -0.01
BRF1-207ENST00000546417 ANKRD44Q8N8A2 993 aa15.01□□□□□ -0.01
BRF1-207ENST00000546417 RFX7Q2KHR2 1363 aa15□□□□□ -0.01
BRF1-207ENST00000546417 GAKO14976 1311 aa15□□□□□ -0.01
BRF1-207ENST00000546417 SLURP2P0DP57 97 aa15□□□□□ -0.01
BRF1-207ENST00000546417 PICALMQ13492 652 aa15□□□□□ -0.01
BRF1-207ENST00000546417 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
BRF1-207ENST00000546417 ZGPATQ8N5A5 531 aaKnown RBP15□□□□□ -0.01
BRF1-207ENST00000546417 SENP6Q9GZR1 1112 aaPredicted RBP15□□□□□ -0.01
BRF1-207ENST00000546417 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15□□□□□ -0.013e-6■□□□□ 9.8
BRF1-207ENST00000546417 DENND2AQ9ULE3 1009 aa15□□□□□ -0.01
BRF1-207ENST00000546417 MAST2Q6P0Q8 1798 aa15□□□□□ -0.01
BRF1-207ENST00000546417 ATAD5Q96QE3 1844 aa14.99□□□□□ -0.01
BRF1-207ENST00000546417 EYA2O00167 538 aa14.99□□□□□ -0.01
BRF1-207ENST00000546417 SEMA3EO15041 775 aa14.99□□□□□ -0.01
BRF1-207ENST00000546417 CCND3P30281 292 aaPredicted RBP14.99□□□□□ -0.01
BRF1-207ENST00000546417 MAPK4P31152 587 aa14.99□□□□□ -0.01
BRF1-207ENST00000546417 IRX3P78415 501 aaPredicted RBP14.99□□□□□ -0.01
BRF1-207ENST00000546417 SH3D19Q5HYK7 790 aa14.99□□□□□ -0.01
BRF1-207ENST00000546417 CCAR1Q8IX12 1150 aaKnown RBP14.99□□□□□ -0.01
BRF1-207ENST00000546417 GPRC5AQ8NFJ5 357 aa14.99□□□□□ -0.01
BRF1-207ENST00000546417 MYLIPQ8WY64 445 aa14.99□□□□□ -0.01
BRF1-207ENST00000546417 DDX4Q9NQI0 724 aaKnown RBP14.99□□□□□ -0.01
BRF1-207ENST00000546417 USP17L5A8MUK1 530 aa14.98□□□□□ -0.01
BRF1-207ENST00000546417 RGS2P41220 211 aa14.98□□□□□ -0.01
BRF1-207ENST00000546417 DZIP1Q86YF9 867 aaKnown RBP14.98□□□□□ -0.01
BRF1-207ENST00000546417 FAM163AQ96GL9 167 aaPredicted RBP14.98□□□□□ -0.01
BRF1-207ENST00000546417 AS3MTQ9HBK9 375 aa14.98□□□□□ -0.01
BRF1-207ENST00000546417 FRMPD3Q5JV73 1810 aa14.98□□□□□ -0.01
BRF1-207ENST00000546417 NPM3O75607 178 aaKnown RBP14.97□□□□□ -0.01
BRF1-207ENST00000546417 FOSL2P15408 326 aa14.97□□□□□ -0.01
BRF1-207ENST00000546417 HOXA7P31268 230 aaPredicted RBP14.97□□□□□ -0.01
BRF1-207ENST00000546417 CAP2P40123 477 aa14.97□□□□□ -0.01
BRF1-207ENST00000546417 SMAD3P84022 425 aaKnown RBP14.97□□□□□ -0.01
BRF1-207ENST00000546417 SHHQ15465 462 aa14.97□□□□□ -0.01
BRF1-207ENST00000546417 WDR63Q8IWG1 891 aa14.97□□□□□ -0.01
BRF1-207ENST00000546417 USP6NLQ92738 828 aa14.97□□□□□ -0.01
BRF1-207ENST00000546417 LTBP2Q14767 1821 aa14.96□□□□□ -0.01
BRF1-207ENST00000546417 FAM196BA6NMK8 535 aa14.96□□□□□ -0.01
BRF1-207ENST00000546417 TNFRSF10AO00220 468 aa14.96□□□□□ -0.01
BRF1-207ENST00000546417 MSCO60682 206 aa14.96□□□□□ -0.01
BRF1-207ENST00000546417 BTDP43251 543 aa14.96□□□□□ -0.01
BRF1-207ENST00000546417 ATP2B3Q16720 1220 aa14.96□□□□□ -0.01
BRF1-207ENST00000546417 TJAP1Q5JTD0 557 aa14.96□□□□□ -0.01
BRF1-207ENST00000546417 P2RX7Q99572 595 aaKnown RBP14.96□□□□□ -0.01
BRF1-207ENST00000546417 APBA2Q99767 749 aa14.96□□□□□ -0.01
BRF1-207ENST00000546417 TMOD4Q9NZQ9 345 aa14.96□□□□□ -0.01
BRF1-207ENST00000546417 ZBTB22O15209 634 aa14.95□□□□□ -0.02
BRF1-207ENST00000546417 ATN1P54259 1190 aaPredicted RBP14.95□□□□□ -0.02
BRF1-207ENST00000546417 HERVK_113P62684 666 aa14.95□□□□□ -0.02
BRF1-207ENST00000546417 CCL14Q16627 93 aa14.95□□□□□ -0.02
BRF1-207ENST00000546417 MORN1Q5T089 497 aa14.95□□□□□ -0.02
BRF1-207ENST00000546417 SPTY2D1Q68D10 685 aaPredicted RBP14.95□□□□□ -0.02
BRF1-207ENST00000546417 GPR142Q7Z601 462 aa14.95□□□□□ -0.02
BRF1-207ENST00000546417 TTYH1Q9H313 450 aaPredicted RBP14.95□□□□□ -0.02
BRF1-207ENST00000546417 TXNRD2Q9NNW7 524 aa14.95□□□□□ -0.02
BRF1-207ENST00000546417 CEP126Q9P2H0 1117 aa14.95□□□□□ -0.02
BRF1-207ENST00000546417 MAP4K4O95819 1239 aaPredicted RBP14.94□□□□□ -0.02
BRF1-207ENST00000546417 PHKA1P46020 1223 aa14.94□□□□□ -0.02
BRF1-207ENST00000546417 BACE1P56817 501 aa14.94□□□□□ -0.02
BRF1-207ENST00000546417 RTP1P59025 263 aa14.94□□□□□ -0.02
BRF1-207ENST00000546417 MTMR2Q13614 643 aa14.94□□□□□ -0.02
BRF1-207ENST00000546417 MFSD14CQ5VZR4 134 aa14.94□□□□□ -0.02
BRF1-207ENST00000546417 ATG9AQ7Z3C6 839 aa14.94□□□□□ -0.02
BRF1-207ENST00000546417 PLEKHH3Q7Z736 793 aa14.94□□□□□ -0.02
BRF1-207ENST00000546417 GTF3C2Q8WUA4 911 aaPredicted RBP14.94□□□□□ -0.02
BRF1-207ENST00000546417 LPAR1Q92633 364 aa14.94□□□□□ -0.02
BRF1-207ENST00000546417 WDR18Q9BV38 432 aa14.94□□□□□ -0.02
BRF1-207ENST00000546417 RBPJLQ9UBG7 517 aa14.94□□□□□ -0.02
BRF1-207ENST00000546417 ABCF2Q9UG63 623 aa14.94□□□□□ -0.02
BRF1-207ENST00000546417 FBXO3Q9UK99 471 aa14.94□□□□□ -0.02
BRF1-207ENST00000546417 MROH7-TTC4A0A0A0MT08 1334 aa14.93□□□□□ -0.02
BRF1-207ENST00000546417 TMEM265A0A087WTH1 108 aa14.93□□□□□ -0.02
BRF1-207ENST00000546417 GPR75-ASB3A0A0A6YYF3 556 aa14.93□□□□□ -0.02
BRF1-207ENST00000546417 C19orf81C9J6K1 198 aa14.93□□□□□ -0.02
BRF1-207ENST00000546417 DNM1LO00429 736 aa14.93□□□□□ -0.02
BRF1-207ENST00000546417 PEX10O60683 326 aa14.93□□□□□ -0.02
BRF1-207ENST00000546417 RFX5P48382 616 aaPredicted RBP14.93□□□□□ -0.02
BRF1-207ENST00000546417 RHBDL3P58872 404 aa14.93□□□□□ -0.02
BRF1-207ENST00000546417 ERVK-9P63128 1117 aa14.93□□□□□ -0.02
BRF1-207ENST00000546417 ERVK-24P63145 666 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms