RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 TRIM17Q9Y577 477 aa9.24□□□□□ -0.93
KDM1B-203ENST00000546309 CCDC171Q6TFL3 1326 aa9.24□□□□□ -0.93
KDM1B-203ENST00000546309 ADGRA2Q96PE1 1338 aa9.24□□□□□ -0.93
KDM1B-203ENST00000546309 A0A0D9SFI3 127 aa9.23□□□□□ -0.93
KDM1B-203ENST00000546309 MANSC4A6NHS7 340 aaPredicted RBP9.23□□□□□ -0.93
KDM1B-203ENST00000546309 MYO1BO43795 1136 aa9.23□□□□□ -0.93
KDM1B-203ENST00000546309 PPP1R12BO60237 982 aaPredicted RBP9.23□□□□□ -0.93
KDM1B-203ENST00000546309 ZBTB48P10074 688 aaPredicted RBP9.23□□□□□ -0.93
KDM1B-203ENST00000546309 MCM2P49736 904 aa9.23□□□□□ -0.93
KDM1B-203ENST00000546309 OTUD7BQ6GQQ9 843 aa9.23□□□□□ -0.93
KDM1B-203ENST00000546309 CDC42EP5Q6NZY7 148 aa9.23□□□□□ -0.93
KDM1B-203ENST00000546309 SPATA5Q8NB90 893 aa9.23□□□□□ -0.93
KDM1B-203ENST00000546309 CD99L2Q8TCZ2 262 aa9.23□□□□□ -0.93
KDM1B-203ENST00000546309 OPTNQ96CV9 577 aa9.23□□□□□ -0.93
KDM1B-203ENST00000546309 EDC3Q96F86 508 aaKnown RBP9.23□□□□□ -0.93
KDM1B-203ENST00000546309 FAM227BQ96M60 508 aa9.23□□□□□ -0.93
KDM1B-203ENST00000546309 DNAJC2Q99543 621 aaKnown RBP9.23□□□□□ -0.93
KDM1B-203ENST00000546309 DSCC1Q9BVC3 393 aa9.23□□□□□ -0.93
KDM1B-203ENST00000546309 MRIQ9BWK5 157 aa9.23□□□□□ -0.93
KDM1B-203ENST00000546309 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.23□□□□□ -0.931e-6■□□□□ 10.8
KDM1B-203ENST00000546309 DDX4Q9NQI0 724 aaKnown RBP9.23□□□□□ -0.93
KDM1B-203ENST00000546309 HMG20BQ9P0W2 317 aa9.23□□□□□ -0.93
KDM1B-203ENST00000546309 PPP2R3BQ9Y5P8 575 aa9.23□□□□□ -0.93
KDM1B-203ENST00000546309 PHF20L1A8MW92 1017 aa9.22□□□□□ -0.93
KDM1B-203ENST00000546309 IRF6O14896 467 aa9.22□□□□□ -0.93
KDM1B-203ENST00000546309 CYP2E1P05181 493 aaPredicted RBP9.22□□□□□ -0.93
KDM1B-203ENST00000546309 ZAP70P43403 619 aa9.22□□□□□ -0.93
KDM1B-203ENST00000546309 INHBEP58166 350 aa9.22□□□□□ -0.93
KDM1B-203ENST00000546309 JAG1P78504 1218 aa9.22□□□□□ -0.93
KDM1B-203ENST00000546309 HDLBPQ00341 1268 aaKnown RBP9.22□□□□□ -0.93
KDM1B-203ENST00000546309 CAVIN4Q5BKX8 364 aa9.22□□□□□ -0.93
KDM1B-203ENST00000546309 APPBP2Q92624 585 aa9.22□□□□□ -0.93
KDM1B-203ENST00000546309 ERO1AQ96HE7 468 aa9.22□□□□□ -0.93
KDM1B-203ENST00000546309 ANTXR1Q9H6X2 564 aa9.22□□□□□ -0.93
KDM1B-203ENST00000546309 DAXXQ9UER7 740 aaPredicted RBP9.22□□□□□ -0.93
KDM1B-203ENST00000546309 ZNF112Q9UJU3 913 aa9.22□□□□□ -0.93
KDM1B-203ENST00000546309 DENND2AQ9ULE3 1009 aa9.22□□□□□ -0.93
KDM1B-203ENST00000546309 SPDYE5A6NIY4 337 aa9.21□□□□□ -0.94
KDM1B-203ENST00000546309 BTBD19C9JJ37 291 aa9.21□□□□□ -0.94
KDM1B-203ENST00000546309 ST18O60284 1047 aa9.21□□□□□ -0.94
KDM1B-203ENST00000546309 ADD2P35612 726 aa9.21□□□□□ -0.94
KDM1B-203ENST00000546309 RBM5P52756 815 aaKnown RBP eCLIP9.21□□□□□ -0.94
KDM1B-203ENST00000546309 MAP3K9P80192 1104 aa9.21□□□□□ -0.94
KDM1B-203ENST00000546309 PTH1RQ03431 593 aa9.21□□□□□ -0.94
KDM1B-203ENST00000546309 RASGRF1Q13972 1273 aa9.21□□□□□ -0.94
KDM1B-203ENST00000546309 SHROOM1Q2M3G4 852 aaPredicted RBP9.21□□□□□ -0.94
KDM1B-203ENST00000546309 RNF20Q5VTR2 975 aa9.21□□□□□ -0.94
KDM1B-203ENST00000546309 MIGA2Q7L4E1 593 aa9.21□□□□□ -0.94
KDM1B-203ENST00000546309 ANKRD13AQ8IZ07 590 aa9.21□□□□□ -0.94
KDM1B-203ENST00000546309 ALDH8A1Q9H2A2 487 aaPredicted RBP9.21□□□□□ -0.94
KDM1B-203ENST00000546309 U3KPZ7 1027 aaPredicted RBP9.21□□□□□ -0.94
KDM1B-203ENST00000546309 DOCK2Q92608 1830 aa9.21□□□□□ -0.94
KDM1B-203ENST00000546309 MYH7P12883 1935 aa9.21□□□□□ -0.94
KDM1B-203ENST00000546309 MGAMO43451 1857 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 WDHD1O75717 1129 aaPredicted RBP9.2□□□□□ -0.94
KDM1B-203ENST00000546309 ZKSCAN1P17029 563 aaPredicted RBP9.2□□□□□ -0.94
KDM1B-203ENST00000546309 IREB2P48200 963 aaKnown RBP9.2□□□□□ -0.94
KDM1B-203ENST00000546309 RHBDL3P58872 404 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 MAP3K10Q02779 954 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 MAP3K12Q12852 859 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 ARHGEF6Q15052 776 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 SUPT20HL1Q3ZLR7 823 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 GPAT2Q6NUI2 795 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 POTEEQ6S8J3 1075 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 HHIPL2Q6UWX4 724 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 ZNF589Q86UQ0 364 aaPredicted RBP9.2□□□□□ -0.94
KDM1B-203ENST00000546309 CCDC84Q86UT8 332 aaPredicted RBP9.2□□□□□ -0.94
KDM1B-203ENST00000546309 HSCBQ8IWL3 235 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 OSBP2Q969R2 916 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 OTUD5Q96G74 571 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 TMEM106CQ9BVX2 250 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 PTPN22Q9Y2R2 807 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 RBM8AQ9Y5S9 174 aaKnown RBP9.2□□□□□ -0.94
KDM1B-203ENST00000546309 SNX14Q9Y5W7 946 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 NDUFB9Q9Y6M9 179 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 GAKO14976 1311 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 SALL1Q9NSC2 1324 aa9.2□□□□□ -0.94
KDM1B-203ENST00000546309 TCRBV5S4A2TA0A5A2 114 aa9.19□□□□□ -0.94
KDM1B-203ENST00000546309 DDTLA6NHG4 134 aaPredicted RBP9.19□□□□□ -0.94
KDM1B-203ENST00000546309 UNCXA6NJT0 531 aa9.19□□□□□ -0.94
KDM1B-203ENST00000546309 K7ELQ4 463 aaPredicted RBP9.19□□□□□ -0.94
KDM1B-203ENST00000546309 EN2P19622 333 aaPredicted RBP9.19□□□□□ -0.94
KDM1B-203ENST00000546309 PSMA5P28066 241 aa9.19□□□□□ -0.94
KDM1B-203ENST00000546309 KRT32Q14532 448 aa9.19□□□□□ -0.94
KDM1B-203ENST00000546309 ALX1Q15699 326 aa9.19□□□□□ -0.94
KDM1B-203ENST00000546309 FKBP1CQ5VVH2 108 aa9.19□□□□□ -0.94
KDM1B-203ENST00000546309 CREB3L3Q68CJ9 461 aa9.19□□□□□ -0.94
KDM1B-203ENST00000546309 FAM83AQ86UY5 434 aa9.19□□□□□ -0.94
KDM1B-203ENST00000546309 ARMC5Q96C12 935 aa9.19□□□□□ -0.94
KDM1B-203ENST00000546309 EFCC1Q9HA90 598 aa9.19□□□□□ -0.94
KDM1B-203ENST00000546309 ZSWIM6Q9HCJ5 1215 aa9.19□□□□□ -0.94
KDM1B-203ENST00000546309 PIH1D3Q9NQM4 214 aaKnown RBP9.19□□□□□ -0.94
KDM1B-203ENST00000546309 CTNNA3Q9UI47 895 aa9.19□□□□□ -0.94
KDM1B-203ENST00000546309 PALD1Q9ULE6 856 aa9.19□□□□□ -0.94
KDM1B-203ENST00000546309 ZMYM6O95789 1325 aa9.19□□□□□ -0.94
KDM1B-203ENST00000546309 RPAP1Q9BWH6 1393 aaPredicted RBP9.19□□□□□ -0.94
KDM1B-203ENST00000546309 PLXNB2O15031 1838 aa9.19□□□□□ -0.94
KDM1B-203ENST00000546309 RANBP2P49792 3224 aaKnown RBP9.18□□□□□ -0.94
KDM1B-203ENST00000546309 CCL15-CCL14A0A0B4J2E2 113 aa9.18□□□□□ -0.94
KDM1B-203ENST00000546309 FAM196BA6NMK8 535 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms