RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 PPP2R3AQ06190 1150 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 ACTN3Q08043 901 aaPredicted RBP8.97□□□□□ -0.97
UBR1-202ENST00000546274 NAA25Q14CX7 972 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 ZMYM1Q5SVZ6 1142 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 DHX40Q8IX18 779 aaKnown RBP8.97□□□□□ -0.97
UBR1-202ENST00000546274 FMNL2Q96PY5 1086 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 NBPF3Q9H094 633 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 ACBD3Q9H3P7 528 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 KIF9Q9HAQ2 790 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 NCOA5Q9HCD5 579 aaKnown RBP8.97□□□□□ -0.97
UBR1-202ENST00000546274 HELLSQ9NRZ9 838 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 RPS6KL1Q9Y6S9 549 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 MAST3O60307 1309 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 MYO5AQ9Y4I1 1855 aaKnown RBP8.97□□□□□ -0.97
UBR1-202ENST00000546274 E7EWF7 191 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 HMGB1P09429 215 aaKnown RBP8.97□□□□□ -0.97
UBR1-202ENST00000546274 HSPD1P10809 573 aaKnown RBP8.97□□□□□ -0.97
UBR1-202ENST00000546274 SFPQP23246 707 aaKnown RBP eCLIP8.97□□□□□ -0.97
UBR1-202ENST00000546274 MEX3CQ5U5Q3 659 aaKnown RBP8.97□□□□□ -0.97
UBR1-202ENST00000546274 ZNF483Q8TF39 744 aaPredicted RBP8.97□□□□□ -0.97
UBR1-202ENST00000546274 MRFAP1L1Q96HT8 127 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 CABS1Q96KC9 395 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 FAM107BQ9H098 131 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 BSDC1Q9NW68 430 aaPredicted RBP8.97□□□□□ -0.97
UBR1-202ENST00000546274 LRP6O75581 1613 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 NEDD4P46934 1319 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 EBAG9O00559 213 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 FDPSP14324 419 aaKnown RBP8.97□□□□□ -0.97
UBR1-202ENST00000546274 ERCC3P19447 782 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 FOSBP53539 338 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 TIMM10P62072 90 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 TMC6Q7Z403 805 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 CCAR1Q8IX12 1150 aaKnown RBP8.97□□□□□ -0.97
UBR1-202ENST00000546274 TTC5Q8N0Z6 440 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 DDX17Q92841 729 aaKnown RBP8.97□□□□□ -0.97
UBR1-202ENST00000546274 SPATS2LQ9NUQ6 558 aaKnown RBP8.97□□□□□ -0.97
UBR1-202ENST00000546274 MCM8Q9UJA3 840 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 FBXO3Q9UK99 471 aa8.97□□□□□ -0.97
UBR1-202ENST00000546274 AKAP11Q9UKA4 1901 aa8.96□□□□□ -0.97
UBR1-202ENST00000546274 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.96□□□□□ -0.97
UBR1-202ENST00000546274 FANCGO15287 622 aa8.96□□□□□ -0.97
UBR1-202ENST00000546274 NRDCO43847 1150 aa8.96□□□□□ -0.97
UBR1-202ENST00000546274 PPFIA3O75145 1194 aa8.96□□□□□ -0.97
UBR1-202ENST00000546274 CAVIN2O95810 425 aa8.96□□□□□ -0.97
UBR1-202ENST00000546274 PDIA3P30101 505 aaKnown RBP8.96□□□□□ -0.97
UBR1-202ENST00000546274 HDXQ7Z353 690 aa8.96□□□□□ -0.97
UBR1-202ENST00000546274 PARD3BQ8TEW8 1205 aa8.96□□□□□ -0.97
UBR1-202ENST00000546274 ZKSCAN4Q969J2 545 aaPredicted RBP8.96□□□□□ -0.97
UBR1-202ENST00000546274 ZBTB10Q96DT7 871 aa8.96□□□□□ -0.97
UBR1-202ENST00000546274 GPR108Q9NPR9 543 aa8.96□□□□□ -0.97
UBR1-202ENST00000546274 CARMIL3Q8ND23 1372 aa8.96□□□□□ -0.98
UBR1-202ENST00000546274 M0R2C6 588 aa8.96□□□□□ -0.98
UBR1-202ENST00000546274 NAP1L1P55209 391 aaKnown RBP8.96□□□□□ -0.98
UBR1-202ENST00000546274 ADCY2Q08462 1091 aa8.96□□□□□ -0.98
UBR1-202ENST00000546274 LRRC24Q50LG9 513 aa8.96□□□□□ -0.98
UBR1-202ENST00000546274 IQCA1Q86XH1 822 aa8.96□□□□□ -0.98
UBR1-202ENST00000546274 ANKRD18AQ8IVF6 992 aa8.96□□□□□ -0.98
UBR1-202ENST00000546274 TATDN2Q93075 761 aa8.96□□□□□ -0.98
UBR1-202ENST00000546274 PAIP2Q9BPZ3 127 aaKnown RBP8.96□□□□□ -0.98
UBR1-202ENST00000546274 PARP3Q9Y6F1 533 aa8.96□□□□□ -0.98
UBR1-202ENST00000546274 MAP2K7O14733 419 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 ZNF772Q68DY9 489 aaPredicted RBP8.95□□□□□ -0.98
UBR1-202ENST00000546274 CHST3Q7LGC8 479 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 FBXL16Q8N461 479 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 ARMC2Q8NEN0 867 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 G3BP2Q9UN86 482 aaKnown RBP8.95□□□□□ -0.98
UBR1-202ENST00000546274 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.95□□□□□ -0.98
UBR1-202ENST00000546274 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.95□□□□□ -0.98
UBR1-202ENST00000546274 TOGARAM1Q9Y4F4 1720 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 ENO4A6NNW6 628 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 CTAGE5O15320 804 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 GSDMDP57764 484 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 GNG11P61952 73 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 STX1AQ16623 288 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 TTLL7Q6ZT98 887 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 STAG1Q8WVM7 1258 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 ZNF274Q96GC6 653 aaPredicted RBP8.95□□□□□ -0.98
UBR1-202ENST00000546274 ZNF594Q96JF6 807 aaPredicted RBP8.95□□□□□ -0.98
UBR1-202ENST00000546274 PUF60Q9UHX1 559 aaKnown RBP8.95□□□□□ -0.98
UBR1-202ENST00000546274 CCDC151A5D8V7 595 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 RPSAP08865 295 aaKnown RBP8.95□□□□□ -0.98
UBR1-202ENST00000546274 FAM160A1Q05DH4 1040 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 ARMCX5Q6P1M9 558 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 FMR1NBQ8N0W7 255 aaPredicted RBP8.95□□□□□ -0.98
UBR1-202ENST00000546274 CCDC26Q8TAB7 109 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 ERCC4Q92889 916 aaPredicted RBP8.95□□□□□ -0.98
UBR1-202ENST00000546274 NEUROD6Q96NK8 337 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 SH3GL3Q99963 347 aa8.95□□□□□ -0.98
UBR1-202ENST00000546274 GPHNQ9NQX3 736 aaPredicted RBP8.95□□□□□ -0.98
UBR1-202ENST00000546274 PSDA5PKW4 1024 aaPredicted RBP8.94□□□□□ -0.98
UBR1-202ENST00000546274 ATL3Q6DD88 541 aa8.94□□□□□ -0.98
UBR1-202ENST00000546274 CABLES1Q8TDN4 633 aa8.94□□□□□ -0.98
UBR1-202ENST00000546274 GOLGA1Q92805 767 aa8.94□□□□□ -0.98
UBR1-202ENST00000546274 OSBP2Q969R2 916 aa8.94□□□□□ -0.98
UBR1-202ENST00000546274 SAMM50Q9Y512 469 aa8.94□□□□□ -0.98
UBR1-202ENST00000546274 PHLPP2Q6ZVD8 1323 aa8.94□□□□□ -0.98
UBR1-202ENST00000546274 CHUKO15111 745 aa8.94□□□□□ -0.98
UBR1-202ENST00000546274 RNF113AO15541 343 aaKnown RBP8.94□□□□□ -0.98
UBR1-202ENST00000546274 GUCY1B3Q02153 619 aa8.94□□□□□ -0.98
UBR1-202ENST00000546274 PUS3Q9BZE2 481 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms