RNA–Protein interactions for RNA: ENST00000546272.5

C12orf43-209, Transcript of chromosome 12 open reading frame 43, humanhuman

TSL 2

Gene C12orf43, Length 1,339 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-209ENST00000546272 PLA2G5P39877 138 aa22.29■■□□□ 1.16
C12orf43-209ENST00000546272 PABPC4Q13310 644 aaKnown RBP eCLIP22.29■■□□□ 1.16
C12orf43-209ENST00000546272 TJAP1Q5JTD0 557 aa22.29■■□□□ 1.16
C12orf43-209ENST00000546272 TRMT44Q8IYL2 757 aaKnown RBP22.29■■□□□ 1.16
C12orf43-209ENST00000546272 LOC285556D6RIA3 1793 aa22.28■■□□□ 1.16
C12orf43-209ENST00000546272 LRRC24Q50LG9 513 aa22.28■■□□□ 1.16
C12orf43-209ENST00000546272 LHX8Q68G74 356 aa22.28■■□□□ 1.16
C12orf43-209ENST00000546272 ZSCAN29Q8IWY8 852 aaPredicted RBP22.28■■□□□ 1.16
C12orf43-209ENST00000546272 PRKAG2Q9UGJ0 569 aa22.28■■□□□ 1.16
C12orf43-209ENST00000546272 RAPGEFL1Q9UHV5 662 aa22.28■■□□□ 1.16
C12orf43-209ENST00000546272 IFIT1P09914 478 aaKnown RBP22.27■■□□□ 1.16
C12orf43-209ENST00000546272 RGS3P49796 1198 aa22.27■■□□□ 1.16
C12orf43-209ENST00000546272 CACNB2Q08289 660 aaPredicted RBP22.27■■□□□ 1.16
C12orf43-209ENST00000546272 SOCS4Q8WXH5 440 aa22.27■■□□□ 1.16
C12orf43-209ENST00000546272 NUDT12Q9BQG2 462 aa22.27■■□□□ 1.16
C12orf43-209ENST00000546272 IDI2Q9BXS1 227 aa22.27■■□□□ 1.16
C12orf43-209ENST00000546272 SMC4Q9NTJ3 1288 aa22.27■■□□□ 1.16
C12orf43-209ENST00000546272 CDH23Q9H251 3354 aa22.26■■□□□ 1.15
C12orf43-209ENST00000546272 LTBP2Q14767 1821 aa22.26■■□□□ 1.15
C12orf43-209ENST00000546272 PRDX5P30044 214 aa22.26■■□□□ 1.15
C12orf43-209ENST00000546272 CCDC84Q86UT8 332 aaPredicted RBP22.26■■□□□ 1.15
C12orf43-209ENST00000546272 SUCLG2Q96I99 432 aa22.26■■□□□ 1.15
C12orf43-209ENST00000546272 ASCC2Q9H1I8 757 aaPredicted RBP22.26■■□□□ 1.15
C12orf43-209ENST00000546272 TTYH1Q9H313 450 aaPredicted RBP22.26■■□□□ 1.15
C12orf43-209ENST00000546272 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.26■■□□□ 1.15
C12orf43-209ENST00000546272 MORF4L1Q9UBU8 362 aa22.26■■□□□ 1.15
C12orf43-209ENST00000546272 ZKSCAN1P17029 563 aaPredicted RBP22.25■■□□□ 1.15
C12orf43-209ENST00000546272 SMAD3P84022 425 aaKnown RBP22.25■■□□□ 1.15
C12orf43-209ENST00000546272 SHHQ15465 462 aa22.25■■□□□ 1.15
C12orf43-209ENST00000546272 SH3BP5LQ7L8J4 393 aa22.25■■□□□ 1.15
C12orf43-209ENST00000546272 FAM122AQ96E09 287 aa22.25■■□□□ 1.15
C12orf43-209ENST00000546272 KAZALD1Q96I82 304 aa22.25■■□□□ 1.15
C12orf43-209ENST00000546272 SENP6Q9GZR1 1112 aaPredicted RBP22.25■■□□□ 1.15
C12orf43-209ENST00000546272 FRMPD3Q5JV73 1810 aa22.25■■□□□ 1.15
C12orf43-209ENST00000546272 PTPRCP08575 1304 aa22.24■■□□□ 1.15
C12orf43-209ENST00000546272 ALDH1L1O75891 902 aa22.24■■□□□ 1.15
C12orf43-209ENST00000546272 LDHBP07195 334 aaKnown RBP22.24■■□□□ 1.15
C12orf43-209ENST00000546272 CCND3P30281 292 aaPredicted RBP22.24■■□□□ 1.15
C12orf43-209ENST00000546272 PUM3Q15397 648 aaKnown RBP22.24■■□□□ 1.15
C12orf43-209ENST00000546272 SLC4A10Q6U841 1118 aa22.24■■□□□ 1.15
C12orf43-209ENST00000546272 FGFR2P21802 821 aa22.23■■□□□ 1.15
C12orf43-209ENST00000546272 RARSP54136 660 aaKnown RBP22.23■■□□□ 1.15
C12orf43-209ENST00000546272 SPP2Q13103 211 aa22.23■■□□□ 1.15
C12orf43-209ENST00000546272 MYH2Q9UKX2 1941 aa22.22■■□□□ 1.15
C12orf43-209ENST00000546272 DDTLA6NHG4 134 aaPredicted RBP22.22■■□□□ 1.15
C12orf43-209ENST00000546272 SLURP2P0DP57 97 aa22.22■■□□□ 1.15
C12orf43-209ENST00000546272 HMGCS2P54868 508 aa22.22■■□□□ 1.15
C12orf43-209ENST00000546272 ZNF280CQ8ND82 737 aa22.22■■□□□ 1.15
C12orf43-209ENST00000546272 TBC1D2Q9BYX2 928 aa22.22■■□□□ 1.15
C12orf43-209ENST00000546272 PDE3AQ14432 1141 aa22.21■■□□□ 1.15
C12orf43-209ENST00000546272 RFX7Q2KHR2 1363 aa22.21■■□□□ 1.15
C12orf43-209ENST00000546272 TMEM265A0A087WTH1 108 aa22.2■■□□□ 1.14
C12orf43-209ENST00000546272 RABL6Q3YEC7 729 aaPredicted RBP22.2■■□□□ 1.14
C12orf43-209ENST00000546272 C9orf50Q5SZB4 431 aa22.2■■□□□ 1.14
C12orf43-209ENST00000546272 SRCIN1Q9C0H9 1055 aa22.2■■□□□ 1.14
C12orf43-209ENST00000546272 NCOR1O75376 2440 aa22.2■■□□□ 1.14
C12orf43-209ENST00000546272 TBC1D12O60347 775 aa22.19■■□□□ 1.14
C12orf43-209ENST00000546272 SLC5A1P13866 664 aa22.19■■□□□ 1.14
C12orf43-209ENST00000546272 ATN1P54259 1190 aaPredicted RBP22.19■■□□□ 1.14
C12orf43-209ENST00000546272 USP6NLQ92738 828 aa22.19■■□□□ 1.14
C12orf43-209ENST00000546272 OSBPL5Q9H0X9 879 aaPredicted RBP22.19■■□□□ 1.14
C12orf43-209ENST00000546272 BICC1Q9H694 974 aaKnown RBP22.19■■□□□ 1.14
C12orf43-209ENST00000546272 NOB1Q9ULX3 412 aaKnown RBP22.19■■□□□ 1.14
C12orf43-209ENST00000546272 ATAD5Q96QE3 1844 aa22.18■■□□□ 1.14
C12orf43-209ENST00000546272 MAPK4P31152 587 aa22.18■■□□□ 1.14
C12orf43-209ENST00000546272 RGS2P41220 211 aa22.18■■□□□ 1.14
C12orf43-209ENST00000546272 IRX3P78415 501 aaPredicted RBP22.18■■□□□ 1.14
C12orf43-209ENST00000546272 CCL14Q16627 93 aa22.18■■□□□ 1.14
C12orf43-209ENST00000546272 SH3D19Q5HYK7 790 aa22.18■■□□□ 1.14
C12orf43-209ENST00000546272 GPRC5AQ8NFJ5 357 aa22.18■■□□□ 1.14
C12orf43-209ENST00000546272 LPIN2Q92539 896 aa22.18■■□□□ 1.14
C12orf43-209ENST00000546272 SALL1Q9NSC2 1324 aa22.18■■□□□ 1.14
C12orf43-209ENST00000546272 NBPF7P0C2Y1 421 aaPredicted RBP22.17■■□□□ 1.14
C12orf43-209ENST00000546272 RTP1P59025 263 aa22.17■■□□□ 1.14
C12orf43-209ENST00000546272 DDX4Q9NQI0 724 aaKnown RBP22.17■■□□□ 1.14
C12orf43-209ENST00000546272 HOXD11P31277 338 aaPredicted RBP22.16■■□□□ 1.14
C12orf43-209ENST00000546272 PICALMQ13492 652 aa22.16■■□□□ 1.14
C12orf43-209ENST00000546272 APBA2Q99767 749 aa22.16■■□□□ 1.14
C12orf43-209ENST00000546272 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.16■■□□□ 1.14
C12orf43-209ENST00000546272 UTYO14607 1347 aa22.16■■□□□ 1.14
C12orf43-209ENST00000546272 GAKO14976 1311 aa22.16■■□□□ 1.14
C12orf43-209ENST00000546272 CCAR1Q8IX12 1150 aaKnown RBP22.15■■□□□ 1.14
C12orf43-209ENST00000546272 USP38Q8NB14 1042 aa22.15■■□□□ 1.14
C12orf43-209ENST00000546272 KLHDC4Q8TBB5 520 aa22.15■■□□□ 1.14
C12orf43-209ENST00000546272 TXNRD2Q9NNW7 524 aa22.15■■□□□ 1.14
C12orf43-209ENST00000546272 GNL3LQ9NVN8 582 aaKnown RBP22.15■■□□□ 1.14
C12orf43-209ENST00000546272 ATP11BQ9Y2G3 1177 aa22.15■■□□□ 1.14
C12orf43-209ENST00000546272 USP17L5A8MUK1 530 aa22.14■■□□□ 1.14
C12orf43-209ENST00000546272 DNM1LO00429 736 aa22.14■■□□□ 1.14
C12orf43-209ENST00000546272 MSCO60682 206 aa22.14■■□□□ 1.14
C12orf43-209ENST00000546272 BCAR3O75815 825 aa22.14■■□□□ 1.14
C12orf43-209ENST00000546272 MORN1Q5T089 497 aa22.14■■□□□ 1.14
C12orf43-209ENST00000546272 ANKRD44Q8N8A2 993 aa22.14■■□□□ 1.14
C12orf43-209ENST00000546272 P2RX7Q99572 595 aaKnown RBP22.14■■□□□ 1.14
C12orf43-209ENST00000546272 AS3MTQ9HBK9 375 aa22.14■■□□□ 1.14
C12orf43-209ENST00000546272 RLFQ13129 1914 aa22.14■■□□□ 1.14
C12orf43-209ENST00000546272 FAM196BA6NMK8 535 aa22.13■■□□□ 1.13
C12orf43-209ENST00000546272 PEX10O60683 326 aa22.13■■□□□ 1.13
C12orf43-209ENST00000546272 HOXA7P31268 230 aaPredicted RBP22.13■■□□□ 1.13
C12orf43-209ENST00000546272 HERVK_113P62684 666 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms