RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CTAGE9A4FU28 777 aa16.19■□□□□ 0.18
SRP54-202ENST00000546080 ZBTB43O43298 467 aa16.19■□□□□ 0.18
SRP54-202ENST00000546080 ADORA1P30542 326 aa16.19■□□□□ 0.18
SRP54-202ENST00000546080 ZAP70P43403 619 aa16.19■□□□□ 0.18
SRP54-202ENST00000546080 SARSP49591 514 aaKnown RBP16.19■□□□□ 0.18
SRP54-202ENST00000546080 PLCD1P51178 756 aa16.19■□□□□ 0.18
SRP54-202ENST00000546080 NFXL1Q6ZNB6 911 aa16.19■□□□□ 0.18
SRP54-202ENST00000546080 STK11IPQ8N1F8 1099 aa16.19■□□□□ 0.18
SRP54-202ENST00000546080 XAGE2Q96GT9 111 aa16.19■□□□□ 0.18
SRP54-202ENST00000546080 ABCB6Q9NP58 842 aa16.19■□□□□ 0.18
SRP54-202ENST00000546080 DENND2AQ9ULE3 1009 aa16.19■□□□□ 0.18
SRP54-202ENST00000546080 ECM29Q5VYK3 1845 aa16.19■□□□□ 0.18
SRP54-202ENST00000546080 GOLGA8AA7E2F4 631 aa16.18■□□□□ 0.18
SRP54-202ENST00000546080 NOM1Q5C9Z4 860 aaKnown RBP16.18■□□□□ 0.18
SRP54-202ENST00000546080 IFNL2Q8IZJ0 200 aa16.18■□□□□ 0.18
SRP54-202ENST00000546080 GOLGA6L1Q8N7Z2 621 aa16.18■□□□□ 0.18
SRP54-202ENST00000546080 IGSF22Q8N9C0 903 aa16.18■□□□□ 0.18
SRP54-202ENST00000546080 NBPF3Q9H094 633 aa16.18■□□□□ 0.18
SRP54-202ENST00000546080 GBP3Q9H0R5 595 aa16.18■□□□□ 0.18
SRP54-202ENST00000546080 L1RE1Q9UN81 338 aa16.18■□□□□ 0.18
SRP54-202ENST00000546080 AKAP2Q9Y2D5 859 aa16.18■□□□□ 0.18
SRP54-202ENST00000546080 FAN1Q9Y2M0 1017 aa16.18■□□□□ 0.18
SRP54-202ENST00000546080 UBN2Q6ZU65 1347 aa16.18■□□□□ 0.18
SRP54-202ENST00000546080 RBL2Q08999 1139 aa16.17■□□□□ 0.18
SRP54-202ENST00000546080 HSP90B2PQ58FF3 399 aa16.17■□□□□ 0.18
SRP54-202ENST00000546080 TBC1D10CQ8IV04 446 aa16.17■□□□□ 0.18
SRP54-202ENST00000546080 NOSTRINQ8IVI9 506 aa16.17■□□□□ 0.18
SRP54-202ENST00000546080 GRAMD1CQ8IYS0 662 aa16.17■□□□□ 0.18
SRP54-202ENST00000546080 ZFP91Q96JP5 570 aaPredicted RBP16.17■□□□□ 0.18
SRP54-202ENST00000546080 A0A0U1RQJ8 604 aa16.17■□□□□ 0.18
SRP54-202ENST00000546080 KDM4FA0A1W2PPD8 638 aa16.17■□□□□ 0.18
SRP54-202ENST00000546080 TEX33O43247 280 aa16.17■□□□□ 0.18
SRP54-202ENST00000546080 RANBP6O60518 1105 aaKnown RBP16.17■□□□□ 0.18
SRP54-202ENST00000546080 N4BP1O75113 896 aaKnown RBP16.17■□□□□ 0.18
SRP54-202ENST00000546080 RHOXF2BP0C7M4 288 aa16.17■□□□□ 0.18
SRP54-202ENST00000546080 ERCC5P28715 1186 aaPredicted RBP16.17■□□□□ 0.18
SRP54-202ENST00000546080 SSRP1Q08945 709 aaKnown RBP16.17■□□□□ 0.18
SRP54-202ENST00000546080 SCARF1Q14162 830 aa16.17■□□□□ 0.18
SRP54-202ENST00000546080 SLC9C2Q5TAH2 1124 aa16.17■□□□□ 0.18
SRP54-202ENST00000546080 KANK3Q6NY19 840 aa16.17■□□□□ 0.18
SRP54-202ENST00000546080 CPLX3Q8WVH0 158 aa16.17■□□□□ 0.18
SRP54-202ENST00000546080 ATRIPQ8WXE1 791 aa16.17■□□□□ 0.18
SRP54-202ENST00000546080 RHOXF2Q9BQY4 288 aa16.17■□□□□ 0.18
SRP54-202ENST00000546080 SLC26A6Q9BXS9 759 aa16.17■□□□□ 0.18
SRP54-202ENST00000546080 NLRP2Q9NX02 1062 aa16.17■□□□□ 0.18
SRP54-202ENST00000546080 FBXO2Q9UK22 296 aaPredicted RBP16.17■□□□□ 0.18
SRP54-202ENST00000546080 RPS6KA5O75582 802 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 PTPREP23469 700 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 GRIN1Q05586 938 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 SAFBQ15424 915 aaKnown RBP eCLIP16.16■□□□□ 0.18
SRP54-202ENST00000546080 NTRK3Q16288 839 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 RASGRP2Q7LDG7 609 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 CCDC102AQ96A19 550 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 TMEM87BQ96K49 555 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 MED15Q96RN5 788 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.16■□□□□ 0.182e-6■■■□□ 16
SRP54-202ENST00000546080 SUGCTQ9HAC7 445 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 TJP1Q07157 1748 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 PLEKHG2Q9H7P9 1386 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 B4E1Z4 1266 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 WWC2Q6AWC2 1192 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 SLC35F6Q8N357 371 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 FAM71BQ8TC56 605 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 ZBTB9Q96C00 473 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 ACBD3Q9H3P7 528 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 SENP2Q9HC62 589 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 TTF2Q9UNY4 1162 aaKnown RBP16.16■□□□□ 0.18
SRP54-202ENST00000546080 STK36Q9NRP7 1315 aa16.16■□□□□ 0.18
SRP54-202ENST00000546080 LAMB4A4D0S4 1761 aa16.15■□□□□ 0.18
SRP54-202ENST00000546080 RGPD5Q99666 1765 aa16.15■□□□□ 0.18
SRP54-202ENST00000546080 CTAGE15A4D2H0 777 aa16.15■□□□□ 0.18
SRP54-202ENST00000546080 MFAP3LO75121 409 aa16.15■□□□□ 0.18
SRP54-202ENST00000546080 CTAGE8P0CG41 777 aa16.15■□□□□ 0.18
SRP54-202ENST00000546080 VSNL1P62760 191 aa16.15■□□□□ 0.18
SRP54-202ENST00000546080 CASP8Q14790 479 aa16.15■□□□□ 0.18
SRP54-202ENST00000546080 CCDC57Q2TAC2 916 aa16.15■□□□□ 0.18
SRP54-202ENST00000546080 TTLL7Q6ZT98 887 aa16.15■□□□□ 0.18
SRP54-202ENST00000546080 CTAGE6Q86UF2 777 aa16.15■□□□□ 0.18
SRP54-202ENST00000546080 CTAGE4Q8IX94 777 aa16.15■□□□□ 0.18
SRP54-202ENST00000546080 NKX2-3Q8TAU0 364 aa16.15■□□□□ 0.18
SRP54-202ENST00000546080 WASF1Q92558 559 aa16.15■□□□□ 0.18
SRP54-202ENST00000546080 DCAF5Q96JK2 942 aa16.15■□□□□ 0.18
SRP54-202ENST00000546080 MYL10Q9BUA6 226 aa16.15■□□□□ 0.18
SRP54-202ENST00000546080 ABCC12Q96J65 1359 aa16.15■□□□□ 0.18
SRP54-202ENST00000546080 BTBD18B2RXH4 712 aa16.14■□□□□ 0.17
SRP54-202ENST00000546080 APPP05067 770 aa16.14■□□□□ 0.17
SRP54-202ENST00000546080 PIP4K2BP78356 416 aa16.14■□□□□ 0.17
SRP54-202ENST00000546080 WHAMMP3Q1A5X7 153 aa16.14■□□□□ 0.17
SRP54-202ENST00000546080 CTR9Q6PD62 1173 aa16.14■□□□□ 0.17
SRP54-202ENST00000546080 NAPGQ99747 312 aaPredicted RBP16.14■□□□□ 0.17
SRP54-202ENST00000546080 SYNRGQ9UMZ2 1314 aa16.14■□□□□ 0.17
SRP54-202ENST00000546080 UBE2Q2LH0YL09 131 aa16.14■□□□□ 0.17
SRP54-202ENST00000546080 ACTN4O43707 911 aaKnown RBP16.14■□□□□ 0.17
SRP54-202ENST00000546080 MMP1P03956 469 aa16.14■□□□□ 0.17
SRP54-202ENST00000546080 TUBBP07437 444 aa16.14■□□□□ 0.17
SRP54-202ENST00000546080 TOB1P50616 345 aaPredicted RBP16.14■□□□□ 0.17
SRP54-202ENST00000546080 FILIP1LQ4L180 1135 aa16.14■□□□□ 0.17
SRP54-202ENST00000546080 RILPL1Q5EBL4 403 aa16.14■□□□□ 0.17
SRP54-202ENST00000546080 TMEM67Q5HYA8 995 aa16.14■□□□□ 0.17
SRP54-202ENST00000546080 SPATA1Q5VX52 437 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms