RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 RGMBQ6NW40 437 aa24.54■■□□□ 1.52
HMGA2-211ENST00000545998 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.54■■□□□ 1.52
HMGA2-211ENST00000545998 TTC6Q86TZ1 520 aa24.54■■□□□ 1.52
HMGA2-211ENST00000545998 FOXP4Q8IVH2 680 aaPredicted RBP24.54■■□□□ 1.52
HMGA2-211ENST00000545998 ANKRD13AQ8IZ07 590 aa24.54■■□□□ 1.52
HMGA2-211ENST00000545998 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.54■■□□□ 1.52
HMGA2-211ENST00000545998 CCDC171Q6TFL3 1326 aa24.53■■□□□ 1.52
HMGA2-211ENST00000545998 FOXP2O15409 715 aa24.53■■□□□ 1.52
HMGA2-211ENST00000545998 MAP3K9P80192 1104 aa24.53■■□□□ 1.52
HMGA2-211ENST00000545998 DNAJC5GQ8N7S2 189 aa24.53■■□□□ 1.52
HMGA2-211ENST00000545998 CLMNQ96JQ2 1002 aa24.53■■□□□ 1.52
HMGA2-211ENST00000545998 EHD4Q9H223 541 aa24.53■■□□□ 1.52
HMGA2-211ENST00000545998 DNAJC18Q9H819 358 aa24.53■■□□□ 1.52
HMGA2-211ENST00000545998 FAM196BA6NMK8 535 aa24.52■■□□□ 1.52
HMGA2-211ENST00000545998 CYP2D6P10635 497 aa24.52■■□□□ 1.52
HMGA2-211ENST00000545998 ZNF157P51786 506 aaPredicted RBP24.52■■□□□ 1.52
HMGA2-211ENST00000545998 EVX2Q03828 476 aa24.52■■□□□ 1.52
HMGA2-211ENST00000545998 VPS53Q5VIR6 699 aa24.52■■□□□ 1.52
HMGA2-211ENST00000545998 USP17L12C9JPN9 530 aa24.51■■□□□ 1.51
HMGA2-211ENST00000545998 USP17L21D6R901 530 aa24.51■■□□□ 1.51
HMGA2-211ENST00000545998 APPP05067 770 aa24.51■■□□□ 1.51
HMGA2-211ENST00000545998 VGLL4Q14135 290 aa24.51■■□□□ 1.51
HMGA2-211ENST00000545998 CYP4F22Q6NT55 531 aa24.51■■□□□ 1.51
HMGA2-211ENST00000545998 CTR9Q6PD62 1173 aa24.51■■□□□ 1.51
HMGA2-211ENST00000545998 IFNL3Q8IZI9 196 aa24.51■■□□□ 1.51
HMGA2-211ENST00000545998 SERPINB13Q9UIV8 391 aa24.51■■□□□ 1.51
HMGA2-211ENST00000545998 LAMB1P07942 1786 aa24.51■■□□□ 1.51
HMGA2-211ENST00000545998 INPP5BP32019 993 aa24.5■■□□□ 1.51
HMGA2-211ENST00000545998 MFAP1P55081 439 aaKnown RBP24.5■■□□□ 1.51
HMGA2-211ENST00000545998 C12orf60Q5U649 245 aa24.5■■□□□ 1.51
HMGA2-211ENST00000545998 ZKSCAN4Q969J2 545 aaPredicted RBP24.5■■□□□ 1.51
HMGA2-211ENST00000545998 IL25Q9H293 177 aa24.5■■□□□ 1.51
HMGA2-211ENST00000545998 ARPP21Q9UBL0 812 aaPredicted RBP24.5■■□□□ 1.51
HMGA2-211ENST00000545998 TDO2P48775 406 aa24.5■■□□□ 1.51
HMGA2-211ENST00000545998 VEGFBP49765 207 aa24.5■■□□□ 1.51
HMGA2-211ENST00000545998 SBK1Q52WX2 424 aa24.5■■□□□ 1.51
HMGA2-211ENST00000545998 PAXIP1Q6ZW49 1069 aaPredicted RBP24.5■■□□□ 1.51
HMGA2-211ENST00000545998 RASAL3Q86YV0 1011 aa24.5■■□□□ 1.51
HMGA2-211ENST00000545998 CRACR2BQ8N4Y2 399 aaPredicted RBP24.5■■□□□ 1.51
HMGA2-211ENST00000545998 CAPNS2Q96L46 248 aa24.5■■□□□ 1.51
HMGA2-211ENST00000545998 NACAP1Q9BZK3 213 aa24.5■■□□□ 1.51
HMGA2-211ENST00000545998 CSADQ9Y600 493 aa24.5■■□□□ 1.51
HMGA2-211ENST00000545998 DOCK1Q14185 1865 aa24.49■■□□□ 1.51
HMGA2-211ENST00000545998 ATAD5Q96QE3 1844 aa24.49■■□□□ 1.51
HMGA2-211ENST00000545998 CYP2D7A0A087X1C5 515 aa24.49■■□□□ 1.51
HMGA2-211ENST00000545998 FAM155AB1AL88 458 aaPredicted RBP24.49■■□□□ 1.51
HMGA2-211ENST00000545998 SLC10A3P09131 477 aa24.49■■□□□ 1.51
HMGA2-211ENST00000545998 HSPD1P10809 573 aaKnown RBP24.49■■□□□ 1.51
HMGA2-211ENST00000545998 GABPAQ06546 454 aa24.49■■□□□ 1.51
HMGA2-211ENST00000545998 AMOTL1Q8IY63 956 aa24.49■■□□□ 1.51
HMGA2-211ENST00000545998 SLC10A4Q96EP9 437 aa24.49■■□□□ 1.51
HMGA2-211ENST00000545998 TRIM34Q9BYJ4 488 aa24.49■■□□□ 1.51
HMGA2-211ENST00000545998 SNCAIPQ9Y6H5 919 aa24.49■■□□□ 1.51
HMGA2-211ENST00000545998 RAD50Q92878 1312 aa24.48■■□□□ 1.51
HMGA2-211ENST00000545998 ECE1P42892 770 aa24.48■■□□□ 1.51
HMGA2-211ENST00000545998 NOL9Q5SY16 702 aaKnown RBP24.48■■□□□ 1.51
HMGA2-211ENST00000545998 RUFY2Q8WXA3 655 aa24.48■■□□□ 1.51
HMGA2-211ENST00000545998 CCDC102AQ96A19 550 aa24.48■■□□□ 1.51
HMGA2-211ENST00000545998 MYH8P13535 1937 aa24.48■■□□□ 1.51
HMGA2-211ENST00000545998 WDR33Q9C0J8 1336 aaKnown RBP24.48■■□□□ 1.51
HMGA2-211ENST00000545998 SMIM22K7EJ46 135 aa24.47■■□□□ 1.51
HMGA2-211ENST00000545998 RRP1BQ14684 758 aaKnown RBP24.47■■□□□ 1.51
HMGA2-211ENST00000545998 ALX1Q15699 326 aa24.47■■□□□ 1.51
HMGA2-211ENST00000545998 NAPBQ9H115 298 aa24.47■■□□□ 1.51
HMGA2-211ENST00000545998 ELP3Q9H9T3 547 aa24.47■■□□□ 1.51
HMGA2-211ENST00000545998 CTNND1O60716 968 aaKnown RBP24.46■■□□□ 1.51
HMGA2-211ENST00000545998 TATDN1Q6P1N9 297 aa24.46■■□□□ 1.51
HMGA2-211ENST00000545998 TAOK2Q9UL54 1235 aa24.46■■□□□ 1.51
HMGA2-211ENST00000545998 GRM1Q13255 1194 aa24.46■■□□□ 1.51
HMGA2-211ENST00000545998 SCYL3Q8IZE3 742 aa24.46■■□□□ 1.51
HMGA2-211ENST00000545998 DYNLL2Q96FJ2 89 aa24.46■■□□□ 1.51
HMGA2-211ENST00000545998 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.46■■□□□ 1.51
HMGA2-211ENST00000545998 THSD7BQ9C0I4 1608 aa24.45■■□□□ 1.51
HMGA2-211ENST00000545998 ROBO3Q96MS0 1386 aa24.45■■□□□ 1.5
HMGA2-211ENST00000545998 MINDY4BA8MYZ0 360 aa24.45■■□□□ 1.5
HMGA2-211ENST00000545998 SGSM2O43147 1006 aa24.45■■□□□ 1.5
HMGA2-211ENST00000545998 SHMT1P34896 483 aa24.45■■□□□ 1.5
HMGA2-211ENST00000545998 ZMYM6O95789 1325 aa24.44■■□□□ 1.5
HMGA2-211ENST00000545998 FGAP02671 866 aa24.44■■□□□ 1.5
HMGA2-211ENST00000545998 CAP2P40123 477 aa24.44■■□□□ 1.5
HMGA2-211ENST00000545998 SPRYD7Q5W111 196 aa24.44■■□□□ 1.5
HMGA2-211ENST00000545998 C16orf86Q6ZW13 317 aa24.44■■□□□ 1.5
HMGA2-211ENST00000545998 OPTNQ96CV9 577 aa24.44■■□□□ 1.5
HMGA2-211ENST00000545998 WNK4Q96J92 1243 aa24.44■■□□□ 1.5
HMGA2-211ENST00000545998 SWAP70Q9UH65 585 aa24.44■■□□□ 1.5
HMGA2-211ENST00000545998 PHIPQ8WWQ0 1821 aa24.44■■□□□ 1.5
HMGA2-211ENST00000545998 GJA5P36382 358 aa24.43■■□□□ 1.5
HMGA2-211ENST00000545998 SLC44A5Q8NCS7 719 aa24.43■■□□□ 1.5
HMGA2-211ENST00000545998 CNKSR2Q8WXI2 1034 aa24.43■■□□□ 1.5
HMGA2-211ENST00000545998 SPDYE5A6NIY4 337 aa24.42■■□□□ 1.5
HMGA2-211ENST00000545998 AOC2O75106 756 aa24.42■■□□□ 1.5
HMGA2-211ENST00000545998 NOGQ13253 232 aa24.42■■□□□ 1.5
HMGA2-211ENST00000545998 ERO1BQ86YB8 467 aa24.42■■□□□ 1.5
HMGA2-211ENST00000545998 DSCC1Q9BVC3 393 aa24.42■■□□□ 1.5
HMGA2-211ENST00000545998 GTF3C3Q9Y5Q9 886 aa24.42■■□□□ 1.5
HMGA2-211ENST00000545998 CDC45O75419 566 aa24.42■■□□□ 1.5
HMGA2-211ENST00000545998 ZBTB48P10074 688 aaPredicted RBP24.42■■□□□ 1.5
HMGA2-211ENST00000545998 CDK8P49336 464 aa24.42■■□□□ 1.5
HMGA2-211ENST00000545998 JAG1P78504 1218 aa24.42■■□□□ 1.5
HMGA2-211ENST00000545998 ESYT1Q9BSJ8 1104 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms