RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 KRT222Q8N1A0 295 aa7.49□□□□□ -1.21
SNHG1-225ENST00000545920 XAGE3Q8WTP9 111 aa7.49□□□□□ -1.21
SNHG1-225ENST00000545920 CACTINQ8WUQ7 758 aaKnown RBP7.49□□□□□ -1.21
SNHG1-225ENST00000545920 L2HGDHQ9H9P8 463 aa7.49□□□□□ -1.21
SNHG1-225ENST00000545920 PAG1Q9NWQ8 432 aa7.49□□□□□ -1.21
SNHG1-225ENST00000545920 HOOK1Q9UJC3 728 aaKnown RBP7.49□□□□□ -1.21
SNHG1-225ENST00000545920 AKAP2Q9Y2D5 859 aa7.49□□□□□ -1.21
SNHG1-225ENST00000545920 PCDHB3Q9Y5E6 796 aa7.49□□□□□ -1.21
SNHG1-225ENST00000545920 ZC3H4Q9UPT8 1303 aaKnown RBP7.49□□□□□ -1.21
SNHG1-225ENST00000545920 FER1L4A9Z1Z3 1794 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 TCHHQ07283 1943 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 CCDC66A2RUB6 948 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 CARNS1A5YM72 827 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 CCDC69A6NI79 296 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 ZBBXA8MT70 800 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 H7C1W4 665 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 F12P00748 615 aaPredicted RBP7.48□□□□□ -1.21
SNHG1-225ENST00000545920 FBXO45P0C2W1 286 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 PHKG2P15735 406 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 CMA1P23946 247 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 DCCP43146 1447 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 NLRP12P59046 1061 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 TFCP2Q12800 502 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 ESCO1Q5FWF5 840 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 TMED8Q6PL24 325 aaPredicted RBP7.48□□□□□ -1.21
SNHG1-225ENST00000545920 BRICD5Q6PL45 260 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 CPLX2Q6PUV4 134 aaKnown RBP7.48□□□□□ -1.21
SNHG1-225ENST00000545920 COPS6Q7L5N1 327 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 ZNF598Q86UK7 904 aaKnown RBP7.48□□□□□ -1.21
SNHG1-225ENST00000545920 DHX40Q8IX18 779 aaKnown RBP7.48□□□□□ -1.21
SNHG1-225ENST00000545920 FSIP1Q8NA03 581 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 CCDC191Q8NCU4 936 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 ZNF512BQ96KM6 892 aaPredicted RBP7.48□□□□□ -1.21
SNHG1-225ENST00000545920 MYD88Q99836 296 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 MTA3Q9BTC8 594 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 FAM53CQ9NYF3 392 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 TLR7Q9NYK1 1049 aaKnown RBP7.48□□□□□ -1.21
SNHG1-225ENST00000545920 GNEQ9Y223 722 aaKnown RBP7.48□□□□□ -1.21
SNHG1-225ENST00000545920 PHLPP2Q6ZVD8 1323 aa7.48□□□□□ -1.21
SNHG1-225ENST00000545920 CARMIL3Q8ND23 1372 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 E7EWF7 191 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 JAK2O60674 1132 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 PPP6R2O75170 966 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 ANXA1P04083 346 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 SFPQP23246 707 aaKnown RBP eCLIP7.47□□□□□ -1.21
SNHG1-225ENST00000545920 PDIA3P30101 505 aaKnown RBP7.47□□□□□ -1.21
SNHG1-225ENST00000545920 ME1P48163 572 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 RCAN1P53805 252 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 CCZ1BP86790 482 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 CCZ1P86791 482 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-225ENST00000545920 TRIM28Q13263 835 aaKnown RBP7.47□□□□□ -1.21
SNHG1-225ENST00000545920 TUBB2AQ13885 445 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 BMS1Q14692 1282 aaKnown RBP7.47□□□□□ -1.21
SNHG1-225ENST00000545920 STK38Q15208 465 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 SF3A1Q15459 793 aaKnown RBP7.47□□□□□ -1.21
SNHG1-225ENST00000545920 IMMTQ16891 758 aaKnown RBP7.47□□□□□ -1.21
SNHG1-225ENST00000545920 SYNE3Q6ZMZ3 975 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 FILIP1Q7Z7B0 1213 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 C17orf53Q8N3J3 647 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-225ENST00000545920 ANKLE1Q8NAG6 615 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 LINC00301Q8NCQ3 95 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 FBXO18Q8NFZ0 1043 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 CCDC34Q96HJ3 373 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 C16orf45Q96MC5 204 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-225ENST00000545920 USB1Q9BQ65 265 aaKnown RBP7.47□□□□□ -1.21
SNHG1-225ENST00000545920 SDF4Q9BRK5 362 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 TUBB2BQ9BVA1 445 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 ARGLU1Q9NWB6 273 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-225ENST00000545920 CWC25Q9NXE8 425 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-225ENST00000545920 FKBPLQ9UIM3 349 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 ZMYM6O95789 1325 aa7.47□□□□□ -1.21
SNHG1-225ENST00000545920 PARP4Q9UKK3 1724 aaKnown RBP7.47□□□□□ -1.21
SNHG1-225ENST00000545920 KDM6AO15550 1401 aaPredicted RBP7.46□□□□□ -1.21
SNHG1-225ENST00000545920 A0A087WZG4 1122 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 EYA2O00167 538 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 SPTLC2O15270 562 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 ZSCAN12O43309 604 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 CTDNEP1O95476 244 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 SLC3A2P08195 630 aaKnown RBP7.46□□□□□ -1.22
SNHG1-225ENST00000545920 HSPD1P10809 573 aaKnown RBP7.46□□□□□ -1.22
SNHG1-225ENST00000545920 STK3Q13188 491 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 CCDC158Q5M9N0 1113 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 BLOC1S3Q6QNY0 202 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 RNF19BQ6ZMZ0 732 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 C11orf57Q6ZUT1 292 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-225ENST00000545920 WASF1Q92558 559 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 LRRC59Q96AG4 307 aaKnown RBP7.46□□□□□ -1.22
SNHG1-225ENST00000545920 THAP11Q96EK4 314 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 C8orf76Q96K31 380 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 USP28Q96RU2 1077 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 DBNDD2Q9BQY9 259 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 PLA2G12BQ9BX93 195 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 SIL1Q9H173 461 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 DACH1Q9UI36 760 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 TUBE1Q9UJT0 475 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 PCDHA7Q9UN72 937 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 IQSEC3Q9UPP2 1182 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-225ENST00000545920 CPDO75976 1380 aa7.46□□□□□ -1.22
SNHG1-225ENST00000545920 TRPM3Q9HCF6 1732 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-225ENST00000545920 POTECB2RU33 542 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms