RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 ZNF594Q96JF6 807 aaPredicted RBP14.02□□□□□ -0.17
COL4A6-209ENST00000545689 RIOK3O14730 519 aaKnown RBP14.02□□□□□ -0.17
COL4A6-209ENST00000545689 ATP2A2P16615 1042 aaKnown RBP14.02□□□□□ -0.17
COL4A6-209ENST00000545689 AKNAD1Q5T1N1 836 aa14.02□□□□□ -0.17
COL4A6-209ENST00000545689 ZAP70P43403 619 aa14.02□□□□□ -0.17
COL4A6-209ENST00000545689 ADCY7P51828 1080 aa14.02□□□□□ -0.17
COL4A6-209ENST00000545689 GABPB1Q06547 395 aaPredicted RBP14.02□□□□□ -0.17
COL4A6-209ENST00000545689 GSTA5Q7RTV2 222 aa14.02□□□□□ -0.17
COL4A6-209ENST00000545689 TRIML1Q8N9V2 468 aa14.02□□□□□ -0.17
COL4A6-209ENST00000545689 ZNF500O60304 480 aaPredicted RBP14.01□□□□□ -0.17
COL4A6-209ENST00000545689 CCNT1O60563 726 aaKnown RBP14.01□□□□□ -0.17
COL4A6-209ENST00000545689 CALCOCO2Q13137 446 aa14.01□□□□□ -0.17
COL4A6-209ENST00000545689 ASIC2Q16515 512 aa14.01□□□□□ -0.17
COL4A6-209ENST00000545689 PPM1EQ8WY54 764 aa14.01□□□□□ -0.17
COL4A6-209ENST00000545689 ZNF496Q96IT1 587 aaPredicted RBP14.01□□□□□ -0.17
COL4A6-209ENST00000545689 NOX5Q96PH1 765 aa14.01□□□□□ -0.17
COL4A6-209ENST00000545689 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.01□□□□□ -0.17
COL4A6-209ENST00000545689 ZMYM6O95789 1325 aa14.01□□□□□ -0.17
COL4A6-209ENST00000545689 CDK12Q9NYV4 1490 aaPredicted RBP14.01□□□□□ -0.17
COL4A6-209ENST00000545689 DKC1O60832 514 aaKnown RBP eCLIP14.01□□□□□ -0.17
COL4A6-209ENST00000545689 MYSM1Q5VVJ2 828 aa14.01□□□□□ -0.17
COL4A6-209ENST00000545689 CSRNP2Q9H175 543 aa14.01□□□□□ -0.17
COL4A6-209ENST00000545689 GGA1Q9UJY5 639 aa14.01□□□□□ -0.17
COL4A6-209ENST00000545689 MCTP2Q6DN12 878 aa14.01□□□□□ -0.17
COL4A6-209ENST00000545689 SECISBP2LQ93073 1101 aaKnown RBP14.01□□□□□ -0.17
COL4A6-209ENST00000545689 EXOC7Q9UPT5 735 aa14.01□□□□□ -0.17
COL4A6-209ENST00000545689 CETN3O15182 167 aa14.01□□□□□ -0.17
COL4A6-209ENST00000545689 RPGRIP1Q96KN7 1286 aa14.01□□□□□ -0.17
COL4A6-209ENST00000545689 ATP6V0A2Q9Y487 856 aa14.01□□□□□ -0.17
COL4A6-209ENST00000545689 ADCY10Q96PN6 1610 aa14.01□□□□□ -0.17
COL4A6-209ENST00000545689 GRIPAP1Q4V328 841 aa14.01□□□□□ -0.17
COL4A6-209ENST00000545689 VPS16Q9H269 839 aa14.01□□□□□ -0.17
COL4A6-209ENST00000545689 APBB1IPQ7Z5R6 666 aaPredicted RBP14□□□□□ -0.17
COL4A6-209ENST00000545689 IL17REQ8NFR9 667 aa14□□□□□ -0.17
COL4A6-209ENST00000545689 ARHGEF10LQ9HCE6 1279 aa14□□□□□ -0.17
COL4A6-209ENST00000545689 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14□□□□□ -0.17
COL4A6-209ENST00000545689 NFE2L3Q9Y4A8 694 aa14□□□□□ -0.17
COL4A6-209ENST00000545689 GNPATO15228 680 aa14□□□□□ -0.17
COL4A6-209ENST00000545689 UFL1O94874 794 aa14□□□□□ -0.17
COL4A6-209ENST00000545689 PCP11498 1178 aaKnown RBP14□□□□□ -0.17
COL4A6-209ENST00000545689 EEF2P13639 858 aaKnown RBP14□□□□□ -0.17
COL4A6-209ENST00000545689 MNAT1P51948 309 aa14□□□□□ -0.17
COL4A6-209ENST00000545689 CTSWP56202 376 aa14□□□□□ -0.17
COL4A6-209ENST00000545689 MTMR6Q9Y217 621 aa14□□□□□ -0.17
COL4A6-209ENST00000545689 TET3O43151 1660 aa14□□□□□ -0.17
COL4A6-209ENST00000545689 JAK2O60674 1132 aa14□□□□□ -0.17
COL4A6-209ENST00000545689 PHKG2P15735 406 aa14□□□□□ -0.17
COL4A6-209ENST00000545689 SLC9C1Q4G0N8 1177 aa14□□□□□ -0.17
COL4A6-209ENST00000545689 CCDC84Q86UT8 332 aaPredicted RBP14□□□□□ -0.17
COL4A6-209ENST00000545689 TRERF1Q96PN7 1200 aa14□□□□□ -0.17
COL4A6-209ENST00000545689 ADCY9O60503 1353 aa14□□□□□ -0.17
COL4A6-209ENST00000545689 A1BGP04217 495 aa14□□□□□ -0.17
COL4A6-209ENST00000545689 NCBP1Q09161 790 aaKnown RBP14□□□□□ -0.17
COL4A6-209ENST00000545689 DCAF17Q5H9S7 520 aaPredicted RBP14□□□□□ -0.17
COL4A6-209ENST00000545689 IFT81Q8WYA0 676 aa14□□□□□ -0.17
COL4A6-209ENST00000545689 PLIN2Q99541 437 aa14□□□□□ -0.17
COL4A6-209ENST00000545689 CIAO1O76071 339 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 GNA14O95837 355 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 CTDSPL2Q05D32 466 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 CCDC50Q8IVM0 306 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 IFT20Q8IY31 132 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 AFAP1L1Q8TED9 768 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 TBC1D22AQ8WUA7 517 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 RAPGEF1Q13905 1077 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 C8orf74Q6P047 294 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 TRMT1LQ7Z2T5 733 aaKnown RBP13.99□□□□□ -0.17
COL4A6-209ENST00000545689 OTUD6BQ8N6M0 293 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 TMEM110-MUSTN1A8MSY1 372 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 PPARAQ07869 468 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 PPP1R7Q15435 360 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 GALNT17Q6IS24 598 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 SELENOSQ9BQE4 189 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 KIAA1468Q9P260 1216 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 LRWD1Q9UFC0 647 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 SMTNP53814 917 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 FAM173BQ6P4H8 233 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 FBF1Q8TES7 1133 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 MRFAP1L1Q96HT8 127 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 ORAI2Q96SN7 254 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 COPRSQ9NQ92 184 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 SAMD15Q9P1V8 674 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 NDC80O14777 642 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 CMA1P23946 247 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 C8orf37Q96NL8 207 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 MED23Q9ULK4 1368 aa13.99□□□□□ -0.17
COL4A6-209ENST00000545689 TNFAIP3P21580 790 aa13.98□□□□□ -0.17
COL4A6-209ENST00000545689 B4GALNT4Q76KP1 1039 aa13.98□□□□□ -0.17
COL4A6-209ENST00000545689 NELFBQ8WX92 580 aa13.98□□□□□ -0.17
COL4A6-209ENST00000545689 LSG1Q9H089 658 aaKnown RBP13.98□□□□□ -0.17
COL4A6-209ENST00000545689 SAP30BPQ9UHR5 308 aaKnown RBP13.98□□□□□ -0.17
COL4A6-209ENST00000545689 WWC3Q9ULE0 1092 aa13.98□□□□□ -0.17
COL4A6-209ENST00000545689 IGSF1Q8N6C5 1336 aa13.98□□□□□ -0.17
COL4A6-209ENST00000545689 ACTN4O43707 911 aaKnown RBP13.98□□□□□ -0.17
COL4A6-209ENST00000545689 PCCAP05165 728 aaPredicted RBP13.98□□□□□ -0.17
COL4A6-209ENST00000545689 CDC25BP30305 580 aa13.98□□□□□ -0.17
COL4A6-209ENST00000545689 RBM6P78332 1123 aaKnown RBP13.98□□□□□ -0.17
COL4A6-209ENST00000545689 WDR44Q5JSH3 913 aa13.98□□□□□ -0.17
COL4A6-209ENST00000545689 DHX37Q8IY37 1157 aaKnown RBP13.98□□□□□ -0.17
COL4A6-209ENST00000545689 IQGAP3Q86VI3 1631 aa13.98□□□□□ -0.17
COL4A6-209ENST00000545689 SYCE1Q8N0S2 351 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms