RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 SLC9C1Q4G0N8 1177 aa24.24■■□□□ 1.47
CHD4-213ENST00000545584 GPAT2Q6NUI2 795 aa24.24■■□□□ 1.47
CHD4-213ENST00000545584 ADGRA1Q86SQ6 560 aa24.24■■□□□ 1.47
CHD4-213ENST00000545584 CERS3Q8IU89 383 aa24.24■■□□□ 1.47
CHD4-213ENST00000545584 MAPKAPK5Q8IW41 473 aa24.24■■□□□ 1.47
CHD4-213ENST00000545584 KIF1BPQ96EK5 621 aa24.24■■□□□ 1.47
CHD4-213ENST00000545584 ARHGAP39Q9C0H5 1083 aa24.24■■□□□ 1.47
CHD4-213ENST00000545584 PTCH2Q9Y6C5 1203 aa24.24■■□□□ 1.47
CHD4-213ENST00000545584 TRIM34Q9BYJ4 488 aa24.23■■□□□ 1.47
CHD4-213ENST00000545584 TBC1D2Q9BYX2 928 aa24.23■■□□□ 1.47
CHD4-213ENST00000545584 SLC45A1Q9Y2W3 748 aa24.23■■□□□ 1.47
CHD4-213ENST00000545584 FLT1P17948 1338 aa24.22■■□□□ 1.47
CHD4-213ENST00000545584 ADGRA2Q96PE1 1338 aa24.22■■□□□ 1.47
CHD4-213ENST00000545584 APBB1O00213 710 aa24.22■■□□□ 1.47
CHD4-213ENST00000545584 CYP2C8P10632 490 aa24.22■■□□□ 1.47
CHD4-213ENST00000545584 HOXD10P28358 340 aa24.22■■□□□ 1.47
CHD4-213ENST00000545584 CAP2P40123 477 aa24.22■■□□□ 1.47
CHD4-213ENST00000545584 TMED8Q6PL24 325 aaPredicted RBP24.22■■□□□ 1.47
CHD4-213ENST00000545584 MAGEB6Q8N7X4 407 aa24.22■■□□□ 1.47
CHD4-213ENST00000545584 MYO5AQ9Y4I1 1855 aaKnown RBP24.21■■□□□ 1.47
CHD4-213ENST00000545584 RAB11FIP3O75154 756 aa24.21■■□□□ 1.47
CHD4-213ENST00000545584 ECM2O94769 699 aaPredicted RBP24.21■■□□□ 1.47
CHD4-213ENST00000545584 FMNL1O95466 1100 aaPredicted RBP24.21■■□□□ 1.47
CHD4-213ENST00000545584 IFIT2P09913 472 aaKnown RBP24.21■■□□□ 1.47
CHD4-213ENST00000545584 PSMC4P43686 418 aa24.21■■□□□ 1.47
CHD4-213ENST00000545584 CCDC84Q86UT8 332 aaPredicted RBP24.21■■□□□ 1.47
CHD4-213ENST00000545584 FOXP4Q8IVH2 680 aaPredicted RBP24.21■■□□□ 1.47
CHD4-213ENST00000545584 CRACR2BQ8N4Y2 399 aaPredicted RBP24.21■■□□□ 1.47
CHD4-213ENST00000545584 TMEM106CQ9BVX2 250 aa24.21■■□□□ 1.47
CHD4-213ENST00000545584 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.21■■□□□ 1.47
CHD4-213ENST00000545584 HLA-DOAP06340 250 aa24.2■■□□□ 1.46
CHD4-213ENST00000545584 DYNLL1P63167 89 aaKnown RBP24.2■■□□□ 1.46
CHD4-213ENST00000545584 PDE3AQ14432 1141 aa24.2■■□□□ 1.46
CHD4-213ENST00000545584 TTF1Q15361 905 aaPredicted RBP24.2■■□□□ 1.46
CHD4-213ENST00000545584 ZNF280CQ8ND82 737 aa24.2■■□□□ 1.46
CHD4-213ENST00000545584 ANTXR1Q9H6X2 564 aa24.2■■□□□ 1.46
CHD4-213ENST00000545584 AS3MTQ9HBK9 375 aa24.2■■□□□ 1.46
CHD4-213ENST00000545584 NDUFB9Q9Y6M9 179 aa24.2■■□□□ 1.46
CHD4-213ENST00000545584 USP17L5A8MUK1 530 aa24.19■■□□□ 1.46
CHD4-213ENST00000545584 USP5P45974 858 aa24.19■■□□□ 1.46
CHD4-213ENST00000545584 SPP2Q13103 211 aa24.19■■□□□ 1.46
CHD4-213ENST00000545584 MIGA1Q8NAN2 632 aa24.19■■□□□ 1.46
CHD4-213ENST00000545584 SMCR8Q8TEV9 937 aaPredicted RBP24.19■■□□□ 1.46
CHD4-213ENST00000545584 ZNF333Q96JL9 665 aa24.19■■□□□ 1.46
CHD4-213ENST00000545584 BCL11AQ9H165 835 aa24.19■■□□□ 1.46
CHD4-213ENST00000545584 PALD1Q9ULE6 856 aa24.19■■□□□ 1.46
CHD4-213ENST00000545584 AGTPBP1Q9UPW5 1226 aa24.19■■□□□ 1.46
CHD4-213ENST00000545584 POTEFA5A3E0 1075 aa24.18■■□□□ 1.46
CHD4-213ENST00000545584 BCRP11274 1271 aa24.18■■□□□ 1.46
CHD4-213ENST00000545584 FCGRTP55899 365 aa24.18■■□□□ 1.46
CHD4-213ENST00000545584 SIRT2Q8IXJ6 389 aa24.18■■□□□ 1.46
CHD4-213ENST00000545584 PROCA1Q8NCQ7 364 aaPredicted RBP24.18■■□□□ 1.46
CHD4-213ENST00000545584 SAP30BPQ9UHR5 308 aaKnown RBP24.18■■□□□ 1.46
CHD4-213ENST00000545584 PNMA3Q9UL41 463 aa24.18■■□□□ 1.46
CHD4-213ENST00000545584 PHIPQ8WWQ0 1821 aa24.18■■□□□ 1.46
CHD4-213ENST00000545584 PDE4DIPQ5VU43 2346 aa24.18■■□□□ 1.46
CHD4-213ENST00000545584 ASNSP08243 561 aa24.17■■□□□ 1.46
CHD4-213ENST00000545584 TRIM47Q96LD4 638 aa24.17■■□□□ 1.46
CHD4-213ENST00000545584 SRRDQ9UH36 339 aa24.17■■□□□ 1.46
CHD4-213ENST00000545584 PTPRFP10586 1907 aa24.17■■□□□ 1.46
CHD4-213ENST00000545584 CDK5RAP2Q96SN8 1893 aa24.16■■□□□ 1.46
CHD4-213ENST00000545584 PABPC4Q13310 644 aaKnown RBP eCLIP24.16■■□□□ 1.46
CHD4-213ENST00000545584 RRP1BQ14684 758 aaKnown RBP24.16■■□□□ 1.46
CHD4-213ENST00000545584 SLC4A8Q2Y0W8 1093 aa24.16■■□□□ 1.46
CHD4-213ENST00000545584 RAET1EQ8TD07 263 aa24.16■■□□□ 1.46
CHD4-213ENST00000545584 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.16■■□□□ 1.46
CHD4-213ENST00000545584 ZSWIM8A7E2V4 1837 aa24.16■■□□□ 1.46
CHD4-213ENST00000545584 ATAD5Q96QE3 1844 aa24.16■■□□□ 1.46
CHD4-213ENST00000545584 MYPNQ86TC9 1320 aa24.15■■□□□ 1.46
CHD4-213ENST00000545584 FOCADQ5VW36 1801 aa24.15■■□□□ 1.46
CHD4-213ENST00000545584 OSBPP22059 807 aa24.15■■□□□ 1.46
CHD4-213ENST00000545584 CTGFP29279 349 aa24.15■■□□□ 1.46
CHD4-213ENST00000545584 METTL16Q86W50 562 aaKnown RBP24.15■■□□□ 1.46
CHD4-213ENST00000545584 GINM1Q9NU53 330 aa24.15■■□□□ 1.46
CHD4-213ENST00000545584 KIAA0100Q14667 2235 aaKnown RBP24.15■■□□□ 1.46
CHD4-213ENST00000545584 HMGCS2P54868 508 aa24.14■■□□□ 1.45
CHD4-213ENST00000545584 SH3TC2Q8TF17 1288 aa24.14■■□□□ 1.45
CHD4-213ENST00000545584 DNAJC2Q99543 621 aaKnown RBP24.14■■□□□ 1.45
CHD4-213ENST00000545584 TREML2Q5T2D2 321 aa24.13■■□□□ 1.45
CHD4-213ENST00000545584 C20orf194Q5TEA3 1177 aa24.13■■□□□ 1.45
CHD4-213ENST00000545584 WDR18Q9BV38 432 aa24.13■■□□□ 1.45
CHD4-213ENST00000545584 DNAJC18Q9H819 358 aa24.13■■□□□ 1.45
CHD4-213ENST00000545584 HTTP42858 3142 aa24.13■■□□□ 1.45
CHD4-213ENST00000545584 SIPA1L1O43166 1804 aa24.12■■□□□ 1.45
CHD4-213ENST00000545584 RBBP6Q7Z6E9 1792 aaKnown RBP24.12■■□□□ 1.45
CHD4-213ENST00000545584 MAGEB6P1A0A0J9YX57 407 aa24.12■■□□□ 1.45
CHD4-213ENST00000545584 GOLIM4O00461 696 aa24.12■■□□□ 1.45
CHD4-213ENST00000545584 MYCP01106 439 aaPredicted RBP24.12■■□□□ 1.45
CHD4-213ENST00000545584 EN2P19622 333 aaPredicted RBP24.12■■□□□ 1.45
CHD4-213ENST00000545584 SH3D19Q5HYK7 790 aa24.12■■□□□ 1.45
CHD4-213ENST00000545584 SLC9C2Q5TAH2 1124 aa24.12■■□□□ 1.45
CHD4-213ENST00000545584 TTC6Q86TZ1 520 aa24.12■■□□□ 1.45
CHD4-213ENST00000545584 TMOD4Q9NZQ9 345 aa24.12■■□□□ 1.45
CHD4-213ENST00000545584 PRPF38BQ5VTL8 546 aaKnown RBP24.11■■□□□ 1.45
CHD4-213ENST00000545584 TNRC18O15417 2968 aaPredicted RBP24.1■■□□□ 1.45
CHD4-213ENST00000545584 MYH1P12882 1939 aa24.1■■□□□ 1.45
CHD4-213ENST00000545584 GDF11O95390 407 aa24.1■■□□□ 1.45
CHD4-213ENST00000545584 PDE6AP16499 860 aa24.1■■□□□ 1.45
CHD4-213ENST00000545584 GRK4P32298 578 aa24.1■■□□□ 1.45
CHD4-213ENST00000545584 GCLCP48506 637 aaPredicted RBP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms