RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 RRP1BQ14684 758 aaKnown RBP25.83■■□□□ 1.73
SCARB1-210ENST00000545493 SIRT2Q8IXJ6 389 aa25.83■■□□□ 1.73
SCARB1-210ENST00000545493 RHPN1Q8TCX5 695 aa25.83■■□□□ 1.73
SCARB1-210ENST00000545493 PARK7Q99497 189 aaKnown RBP25.83■■□□□ 1.73
SCARB1-210ENST00000545493 IL1RAPL2Q9NP60 686 aa25.83■■□□□ 1.73
SCARB1-210ENST00000545493 IGSF3O75054 1194 aa25.82■■□□□ 1.72
SCARB1-210ENST00000545493 BAG3O95817 575 aa25.82■■□□□ 1.72
SCARB1-210ENST00000545493 MAPKAPK5Q8IW41 473 aa25.82■■□□□ 1.72
SCARB1-210ENST00000545493 ANTXR1Q9H6X2 564 aa25.82■■□□□ 1.72
SCARB1-210ENST00000545493 PDE4DIPQ5VU43 2346 aa25.81■■□□□ 1.72
SCARB1-210ENST00000545493 TRIM75PA6NK02 468 aa25.81■■□□□ 1.72
SCARB1-210ENST00000545493 CYP2C8P10632 490 aa25.81■■□□□ 1.72
SCARB1-210ENST00000545493 PLCG2P16885 1265 aa25.81■■□□□ 1.72
SCARB1-210ENST00000545493 TGFBRAP1Q8WUH2 860 aa25.81■■□□□ 1.72
SCARB1-210ENST00000545493 DNAJC18Q9H819 358 aa25.81■■□□□ 1.72
SCARB1-210ENST00000545493 MGAMO43451 1857 aa25.81■■□□□ 1.72
SCARB1-210ENST00000545493 POTEFA5A3E0 1075 aa25.8■■□□□ 1.72
SCARB1-210ENST00000545493 IDH1O75874 414 aaKnown RBP25.8■■□□□ 1.72
SCARB1-210ENST00000545493 DYNLL1P63167 89 aaKnown RBP25.8■■□□□ 1.72
SCARB1-210ENST00000545493 ARHGEF6Q15052 776 aa25.8■■□□□ 1.72
SCARB1-210ENST00000545493 HSP90AB4PQ58FF6 505 aa25.8■■□□□ 1.72
SCARB1-210ENST00000545493 RPAP2Q8IXW5 612 aaPredicted RBP25.8■■□□□ 1.72
SCARB1-210ENST00000545493 ZNF333Q96JL9 665 aa25.8■■□□□ 1.72
SCARB1-210ENST00000545493 ECM2O94769 699 aaPredicted RBP25.79■■□□□ 1.72
SCARB1-210ENST00000545493 BCRP11274 1271 aa25.79■■□□□ 1.72
SCARB1-210ENST00000545493 KIF22Q14807 665 aa25.79■■□□□ 1.72
SCARB1-210ENST00000545493 C20orf194Q5TEA3 1177 aa25.79■■□□□ 1.72
SCARB1-210ENST00000545493 GADL1Q6ZQY3 521 aa25.79■■□□□ 1.72
SCARB1-210ENST00000545493 FASTKD5Q7L8L6 764 aaKnown RBP25.79■■□□□ 1.72
SCARB1-210ENST00000545493 HERC5Q9UII4 1024 aaKnown RBP25.79■■□□□ 1.72
SCARB1-210ENST00000545493 NAV1Q8NEY1 1877 aa25.79■■□□□ 1.72
SCARB1-210ENST00000545493 MYH1P12882 1939 aa25.78■■□□□ 1.72
SCARB1-210ENST00000545493 CYP7A1P22680 504 aa25.78■■□□□ 1.72
SCARB1-210ENST00000545493 TRIM47Q96LD4 638 aa25.78■■□□□ 1.72
SCARB1-210ENST00000545493 APBB1O00213 710 aa25.77■■□□□ 1.72
SCARB1-210ENST00000545493 CAP2P40123 477 aa25.77■■□□□ 1.72
SCARB1-210ENST00000545493 MAGEB6Q8N7X4 407 aa25.77■■□□□ 1.72
SCARB1-210ENST00000545493 MIGA1Q8NAN2 632 aa25.77■■□□□ 1.72
SCARB1-210ENST00000545493 KIF1BPQ96EK5 621 aa25.77■■□□□ 1.72
SCARB1-210ENST00000545493 DHX36Q9H2U1 1008 aaKnown RBP25.77■■□□□ 1.72
SCARB1-210ENST00000545493 PI4KBQ9UBF8 816 aa25.77■■□□□ 1.72
SCARB1-210ENST00000545493 SLC45A1Q9Y2W3 748 aa25.77■■□□□ 1.72
SCARB1-210ENST00000545493 HMMRO75330 724 aa25.76■■□□□ 1.71
SCARB1-210ENST00000545493 SLC9C1Q4G0N8 1177 aa25.76■■□□□ 1.71
SCARB1-210ENST00000545493 TREML2Q5T2D2 321 aa25.76■■□□□ 1.71
SCARB1-210ENST00000545493 METTL16Q86W50 562 aaKnown RBP25.76■■□□□ 1.71
SCARB1-210ENST00000545493 GNRH1P01148 92 aa25.75■■□□□ 1.71
SCARB1-210ENST00000545493 PSMC4P43686 418 aa25.75■■□□□ 1.71
SCARB1-210ENST00000545493 AGTPBP1Q9UPW5 1226 aa25.75■■□□□ 1.71
SCARB1-210ENST00000545493 KIAA0100Q14667 2235 aaKnown RBP25.75■■□□□ 1.71
SCARB1-210ENST00000545493 OSBPP22059 807 aa25.74■■□□□ 1.71
SCARB1-210ENST00000545493 SHROOM1Q2M3G4 852 aaPredicted RBP25.74■■□□□ 1.71
SCARB1-210ENST00000545493 CLASRPQ8N2M8 674 aaKnown RBP25.74■■□□□ 1.71
SCARB1-210ENST00000545493 SH3TC2Q8TF17 1288 aa25.74■■□□□ 1.71
SCARB1-210ENST00000545493 SAP30BPQ9UHR5 308 aaKnown RBP25.74■■□□□ 1.71
SCARB1-210ENST00000545493 PALD1Q9ULE6 856 aa25.74■■□□□ 1.71
SCARB1-210ENST00000545493 JAG1P78504 1218 aa25.73■■□□□ 1.71
SCARB1-210ENST00000545493 MAP3K12Q12852 859 aa25.73■■□□□ 1.71
SCARB1-210ENST00000545493 SLC4A8Q2Y0W8 1093 aa25.73■■□□□ 1.71
SCARB1-210ENST00000545493 ZNF280CQ8ND82 737 aa25.73■■□□□ 1.71
SCARB1-210ENST00000545493 SRRDQ9UH36 339 aa25.73■■□□□ 1.71
SCARB1-210ENST00000545493 PRMT2P55345 433 aa25.72■■□□□ 1.71
SCARB1-210ENST00000545493 SPP2Q13103 211 aa25.72■■□□□ 1.71
SCARB1-210ENST00000545493 PROCA1Q8NCQ7 364 aaPredicted RBP25.72■■□□□ 1.71
SCARB1-210ENST00000545493 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.72■■□□□ 1.71
SCARB1-210ENST00000545493 TBC1D2Q9BYX2 928 aa25.72■■□□□ 1.71
SCARB1-210ENST00000545493 MYPNQ86TC9 1320 aa25.71■■□□□ 1.71
SCARB1-210ENST00000545493 USP17L5A8MUK1 530 aa25.71■■□□□ 1.71
SCARB1-210ENST00000545493 GDF11O95390 407 aa25.71■■□□□ 1.71
SCARB1-210ENST00000545493 PDE3AQ14432 1141 aa25.71■■□□□ 1.71
SCARB1-210ENST00000545493 RIOK1Q9BRS2 568 aaKnown RBP25.71■■□□□ 1.71
SCARB1-210ENST00000545493 RAB11FIP3O75154 756 aa25.7■■□□□ 1.7
SCARB1-210ENST00000545493 FMNL1O95466 1100 aaPredicted RBP25.7■■□□□ 1.7
SCARB1-210ENST00000545493 HMGCS2P54868 508 aa25.7■■□□□ 1.7
SCARB1-210ENST00000545493 TMED8Q6PL24 325 aaPredicted RBP25.7■■□□□ 1.7
SCARB1-210ENST00000545493 CERS3Q8IU89 383 aa25.7■■□□□ 1.7
SCARB1-210ENST00000545493 CRACR2BQ8N4Y2 399 aaPredicted RBP25.7■■□□□ 1.7
SCARB1-210ENST00000545493 CHMP4BQ9H444 224 aaKnown RBP25.7■■□□□ 1.7
SCARB1-210ENST00000545493 HLA-DOAP06340 250 aa25.69■■□□□ 1.7
SCARB1-210ENST00000545493 IFIT2P09913 472 aaKnown RBP25.69■■□□□ 1.7
SCARB1-210ENST00000545493 EN2P19622 333 aaPredicted RBP25.69■■□□□ 1.7
SCARB1-210ENST00000545493 PRKCZQ05513 592 aa25.69■■□□□ 1.7
SCARB1-210ENST00000545493 SH3D19Q5HYK7 790 aa25.69■■□□□ 1.7
SCARB1-210ENST00000545493 NBPF11Q86T75 865 aa25.69■■□□□ 1.7
SCARB1-210ENST00000545493 SMCR8Q8TEV9 937 aaPredicted RBP25.69■■□□□ 1.7
SCARB1-210ENST00000545493 DNAJC2Q99543 621 aaKnown RBP25.69■■□□□ 1.7
SCARB1-210ENST00000545493 AS3MTQ9HBK9 375 aa25.69■■□□□ 1.7
SCARB1-210ENST00000545493 ZBTB21Q9ULJ3 1066 aa25.69■■□□□ 1.7
SCARB1-210ENST00000545493 GOLIM4O00461 696 aa25.68■■□□□ 1.7
SCARB1-210ENST00000545493 ASNSP08243 561 aa25.68■■□□□ 1.7
SCARB1-210ENST00000545493 PDE6AP16499 860 aa25.68■■□□□ 1.7
SCARB1-210ENST00000545493 USP5P45974 858 aa25.68■■□□□ 1.7
SCARB1-210ENST00000545493 FCGRTP55899 365 aa25.68■■□□□ 1.7
SCARB1-210ENST00000545493 TTF1Q15361 905 aaPredicted RBP25.68■■□□□ 1.7
SCARB1-210ENST00000545493 FOXP4Q8IVH2 680 aaPredicted RBP25.68■■□□□ 1.7
SCARB1-210ENST00000545493 EDC3Q96F86 508 aaKnown RBP25.68■■□□□ 1.7
SCARB1-210ENST00000545493 TRIM34Q9BYJ4 488 aa25.68■■□□□ 1.7
SCARB1-210ENST00000545493 MYH7P12883 1935 aa25.67■■□□□ 1.7
SCARB1-210ENST00000545493 MYCP01106 439 aaPredicted RBP25.67■■□□□ 1.7
SCARB1-210ENST00000545493 MTMR2Q13614 643 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms