RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 PRKAR2AP13861 404 aaKnown RBP11.76□□□□□ -0.53
CHD4-212ENST00000545083 CYP2B6P20813 491 aa11.76□□□□□ -0.53
CHD4-212ENST00000545083 PHKA1P46020 1223 aa11.76□□□□□ -0.53
CHD4-212ENST00000545083 GCLCP48506 637 aaPredicted RBP11.76□□□□□ -0.53
CHD4-212ENST00000545083 SPP2Q13103 211 aa11.76□□□□□ -0.53
CHD4-212ENST00000545083 PICALMQ13492 652 aa11.76□□□□□ -0.53
CHD4-212ENST00000545083 RRP1BQ14684 758 aaKnown RBP11.76□□□□□ -0.53
CHD4-212ENST00000545083 FAM109BQ6ICB4 259 aaPredicted RBP11.76□□□□□ -0.53
CHD4-212ENST00000545083 PROCA1Q8NCQ7 364 aaPredicted RBP11.76□□□□□ -0.53
CHD4-212ENST00000545083 ASCC2Q9H1I8 757 aaPredicted RBP11.76□□□□□ -0.53
CHD4-212ENST00000545083 HMGCS2P54868 508 aa11.75□□□□□ -0.53
CHD4-212ENST00000545083 MORF4L1Q9UBU8 362 aa11.75□□□□□ -0.53
CHD4-212ENST00000545083 LOC285556D6RIA3 1793 aa11.74□□□□□ -0.53
CHD4-212ENST00000545083 CCND3P30281 292 aaPredicted RBP11.74□□□□□ -0.53
CHD4-212ENST00000545083 BTDP43251 543 aa11.74□□□□□ -0.53
CHD4-212ENST00000545083 RHBDL3P58872 404 aa11.74□□□□□ -0.53
CHD4-212ENST00000545083 CACNB2Q08289 660 aaPredicted RBP11.74□□□□□ -0.53
CHD4-212ENST00000545083 LHX8Q68G74 356 aa11.74□□□□□ -0.53
CHD4-212ENST00000545083 ZNF280CQ8ND82 737 aa11.74□□□□□ -0.53
CHD4-212ENST00000545083 USP44Q9H0E7 712 aa11.74□□□□□ -0.53
CHD4-212ENST00000545083 TXNRD2Q9NNW7 524 aa11.74□□□□□ -0.53
CHD4-212ENST00000545083 DNAH12Q6ZR08 3092 aa11.74□□□□□ -0.53
CHD4-212ENST00000545083 CDH23Q9H251 3354 aa11.73□□□□□ -0.53
CHD4-212ENST00000545083 TBC1D12O60347 775 aa11.73□□□□□ -0.53
CHD4-212ENST00000545083 ADORA1P30542 326 aa11.73□□□□□ -0.53
CHD4-212ENST00000545083 CCL14Q16627 93 aa11.73□□□□□ -0.53
CHD4-212ENST00000545083 ATP2B3Q16720 1220 aa11.73□□□□□ -0.53
CHD4-212ENST00000545083 SH3D19Q5HYK7 790 aa11.73□□□□□ -0.53
CHD4-212ENST00000545083 ZNF384Q8TF68 577 aa11.73□□□□□ -0.53
CHD4-212ENST00000545083 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.73□□□□□ -0.53
CHD4-212ENST00000545083 PRDM6Q9NQX0 595 aa11.73□□□□□ -0.53
CHD4-212ENST00000545083 GNL3LQ9NVN8 582 aaKnown RBP11.73□□□□□ -0.53
CHD4-212ENST00000545083 MYH2Q9UKX2 1941 aa11.73□□□□□ -0.53
CHD4-212ENST00000545083 DENND2AQ9ULE3 1009 aa11.73□□□□□ -0.53
CHD4-212ENST00000545083 XRCC5P13010 732 aaKnown RBP11.72□□□□□ -0.53
CHD4-212ENST00000545083 RASGRF1Q13972 1273 aa11.72□□□□□ -0.53
CHD4-212ENST00000545083 USP6NLQ92738 828 aa11.72□□□□□ -0.53
CHD4-212ENST00000545083 FAM163AQ96GL9 167 aaPredicted RBP11.72□□□□□ -0.53
CHD4-212ENST00000545083 P2RX7Q99572 595 aaKnown RBP11.72□□□□□ -0.53
CHD4-212ENST00000545083 CDX2Q99626 313 aaPredicted RBP11.72□□□□□ -0.53
CHD4-212ENST00000545083 NUDT12Q9BQG2 462 aa11.72□□□□□ -0.53
CHD4-212ENST00000545083 OSBPL5Q9H0X9 879 aaPredicted RBP11.72□□□□□ -0.53
CHD4-212ENST00000545083 SIL1Q9H173 461 aa11.72□□□□□ -0.53
CHD4-212ENST00000545083 MROH7-TTC4A0A0A0MT08 1334 aa11.71□□□□□ -0.53
CHD4-212ENST00000545083 SEMA3EO15041 775 aa11.71□□□□□ -0.53
CHD4-212ENST00000545083 ZKSCAN1P17029 563 aaPredicted RBP11.71□□□□□ -0.53
CHD4-212ENST00000545083 CAP2P40123 477 aa11.71□□□□□ -0.53
CHD4-212ENST00000545083 PABPC4Q13310 644 aaKnown RBP eCLIP11.71□□□□□ -0.53
CHD4-212ENST00000545083 ZNF697Q5TEC3 545 aa11.71□□□□□ -0.53
CHD4-212ENST00000545083 CCDC102BQ68D86 513 aa11.71□□□□□ -0.53
CHD4-212ENST00000545083 POTEEQ6S8J3 1075 aa11.71□□□□□ -0.53
CHD4-212ENST00000545083 DZIP1Q86YF9 867 aaKnown RBP11.71□□□□□ -0.53
CHD4-212ENST00000545083 MRPL50Q8N5N7 158 aaKnown RBP11.71□□□□□ -0.53
CHD4-212ENST00000545083 PORCNQ9H237 461 aa11.71□□□□□ -0.53
CHD4-212ENST00000545083 ABCF2Q9UG63 623 aa11.71□□□□□ -0.53
CHD4-212ENST00000545083 MUC3AQ02505 3323 aa11.71□□□□□ -0.54
CHD4-212ENST00000545083 GPR75-ASB3A0A0A6YYF3 556 aa11.7□□□□□ -0.54
CHD4-212ENST00000545083 USP17L5A8MUK1 530 aa11.7□□□□□ -0.54
CHD4-212ENST00000545083 ZBTB22O15209 634 aa11.7□□□□□ -0.54
CHD4-212ENST00000545083 JAG1P78504 1218 aa11.7□□□□□ -0.54
CHD4-212ENST00000545083 MECOMQ03112 1051 aa11.7□□□□□ -0.54
CHD4-212ENST00000545083 Q3C1V9 767 aa11.7□□□□□ -0.54
CHD4-212ENST00000545083 MAFAQ8NHW3 353 aaPredicted RBP11.7□□□□□ -0.54
CHD4-212ENST00000545083 SOCS4Q8WXH5 440 aa11.7□□□□□ -0.54
CHD4-212ENST00000545083 SENP6Q9GZR1 1112 aaPredicted RBP11.7□□□□□ -0.54
CHD4-212ENST00000545083 CEP126Q9P2H0 1117 aa11.7□□□□□ -0.54
CHD4-212ENST00000545083 RBPJLQ9UBG7 517 aa11.7□□□□□ -0.54
CHD4-212ENST00000545083 NPM3O75607 178 aaKnown RBP11.69□□□□□ -0.54
CHD4-212ENST00000545083 CIAO1O76071 339 aa11.69□□□□□ -0.54
CHD4-212ENST00000545083 HOXA7P31268 230 aaPredicted RBP11.69□□□□□ -0.54
CHD4-212ENST00000545083 ATN1P54259 1190 aaPredicted RBP11.69□□□□□ -0.54
CHD4-212ENST00000545083 HERVK_113P62684 666 aa11.69□□□□□ -0.54
CHD4-212ENST00000545083 IRX3P78415 501 aaPredicted RBP11.69□□□□□ -0.54
CHD4-212ENST00000545083 MTMR2Q13614 643 aa11.69□□□□□ -0.54
CHD4-212ENST00000545083 SHROOM1Q2M3G4 852 aaPredicted RBP11.69□□□□□ -0.54
CHD4-212ENST00000545083 C9orf50Q5SZB4 431 aa11.69□□□□□ -0.54
CHD4-212ENST00000545083 MORN1Q5T089 497 aa11.69□□□□□ -0.54
CHD4-212ENST00000545083 GPR142Q7Z601 462 aa11.69□□□□□ -0.54
CHD4-212ENST00000545083 ZGPATQ8N5A5 531 aaKnown RBP11.69□□□□□ -0.54
CHD4-212ENST00000545083 GPRC5AQ8NFJ5 357 aa11.69□□□□□ -0.54
CHD4-212ENST00000545083 MYLIPQ8WY64 445 aa11.69□□□□□ -0.54
CHD4-212ENST00000545083 LBHD1Q9BQE6 289 aaPredicted RBP11.69□□□□□ -0.54
CHD4-212ENST00000545083 TBC1D2Q9BYX2 928 aa11.69□□□□□ -0.54
CHD4-212ENST00000545083 TTYH1Q9H313 450 aaPredicted RBP11.69□□□□□ -0.54
CHD4-212ENST00000545083 SEMA6BQ9H3T3 888 aa11.69□□□□□ -0.54
CHD4-212ENST00000545083 PA2G4Q9UQ80 394 aaKnown RBP11.69□□□□□ -0.54
CHD4-212ENST00000545083 MAPK4P31152 587 aa11.68□□□□□ -0.54
CHD4-212ENST00000545083 BACE1P56817 501 aa11.68□□□□□ -0.54
CHD4-212ENST00000545083 ERVK-9P63128 1117 aa11.68□□□□□ -0.54
CHD4-212ENST00000545083 ERVK-24P63145 666 aa11.68□□□□□ -0.54
CHD4-212ENST00000545083 PDE3AQ14432 1141 aa11.68□□□□□ -0.54
CHD4-212ENST00000545083 SHHQ15465 462 aa11.68□□□□□ -0.54
CHD4-212ENST00000545083 SLF2Q8IX21 1173 aa11.68□□□□□ -0.54
CHD4-212ENST00000545083 TRMT44Q8IYL2 757 aaKnown RBP11.68□□□□□ -0.54
CHD4-212ENST00000545083 WDR18Q9BV38 432 aa11.68□□□□□ -0.54
CHD4-212ENST00000545083 FLRT1Q9NZU1 646 aa11.68□□□□□ -0.54
CHD4-212ENST00000545083 FBXO3Q9UK99 471 aa11.68□□□□□ -0.54
CHD4-212ENST00000545083 MAST2Q6P0Q8 1798 aa11.68□□□□□ -0.54
CHD4-212ENST00000545083 ATAD5Q96QE3 1844 aa11.67□□□□□ -0.54
CHD4-212ENST00000545083 PDS5AQ29RF7 1337 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms