RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 CETPP11597 493 aa8.05□□□□□ -1.12
CDCA3-209ENST00000544610 PDE4AP27815 886 aa8.05□□□□□ -1.12
CDCA3-209ENST00000544610 SLC9C1Q4G0N8 1177 aa8.05□□□□□ -1.12
CDCA3-209ENST00000544610 APOBEC3HQ6NTF7 200 aaKnown RBP8.05□□□□□ -1.12
CDCA3-209ENST00000544610 NBPF11Q86T75 865 aa8.05□□□□□ -1.12
CDCA3-209ENST00000544610 TICAM2Q86XR7 235 aa8.05□□□□□ -1.12
CDCA3-209ENST00000544610 ZKSCAN4Q969J2 545 aaPredicted RBP8.05□□□□□ -1.12
CDCA3-209ENST00000544610 HOOK2Q96ED9 719 aa8.05□□□□□ -1.12
CDCA3-209ENST00000544610 KIF1BPQ96EK5 621 aa8.05□□□□□ -1.12
CDCA3-209ENST00000544610 WRNIP1Q96S55 665 aa8.05□□□□□ -1.12
CDCA3-209ENST00000544610 TMEM106CQ9BVX2 250 aa8.05□□□□□ -1.12
CDCA3-209ENST00000544610 SUGT1Q9Y2Z0 365 aa8.05□□□□□ -1.12
CDCA3-209ENST00000544610 BTBD19C9JJ37 291 aa8.04□□□□□ -1.12
CDCA3-209ENST00000544610 IRF6O14896 467 aa8.04□□□□□ -1.12
CDCA3-209ENST00000544610 EIF5BO60841 1220 aaKnown RBP8.04□□□□□ -1.12
CDCA3-209ENST00000544610 WDHD1O75717 1129 aaPredicted RBP8.04□□□□□ -1.12
CDCA3-209ENST00000544610 GNRH1P01148 92 aa8.04□□□□□ -1.12
CDCA3-209ENST00000544610 FGFR2P21802 821 aa8.04□□□□□ -1.12
CDCA3-209ENST00000544610 BCAMP50895 628 aa8.04□□□□□ -1.12
CDCA3-209ENST00000544610 LACTBP83111 547 aaPredicted RBP8.04□□□□□ -1.12
CDCA3-209ENST00000544610 PPIL2Q13356 520 aa8.04□□□□□ -1.12
CDCA3-209ENST00000544610 SNAPC2Q13487 334 aa8.04□□□□□ -1.12
CDCA3-209ENST00000544610 PUM3Q15397 648 aaKnown RBP8.04□□□□□ -1.12
CDCA3-209ENST00000544610 DCAF15Q66K64 600 aa8.04□□□□□ -1.12
CDCA3-209ENST00000544610 HHIPL2Q6UWX4 724 aa8.04□□□□□ -1.12
CDCA3-209ENST00000544610 CHD1LQ86WJ1 897 aa8.04□□□□□ -1.12
CDCA3-209ENST00000544610 KLHDC4Q8TBB5 520 aa8.04□□□□□ -1.12
CDCA3-209ENST00000544610 GPR108Q9NPR9 543 aa8.04□□□□□ -1.12
CDCA3-209ENST00000544610 TMOD2Q9NZR1 351 aa8.04□□□□□ -1.12
CDCA3-209ENST00000544610 ZSWIM8A7E2V4 1837 aa8.03□□□□□ -1.12
CDCA3-209ENST00000544610 PNMA6EA0A0J9YXQ4 647 aa8.03□□□□□ -1.12
CDCA3-209ENST00000544610 IFIT1P09914 478 aaKnown RBP8.03□□□□□ -1.12
CDCA3-209ENST00000544610 PRMT2P55345 433 aa8.03□□□□□ -1.12
CDCA3-209ENST00000544610 PPATQ06203 517 aa8.03□□□□□ -1.12
CDCA3-209ENST00000544610 C17orf99Q6UX52 265 aa8.03□□□□□ -1.12
CDCA3-209ENST00000544610 KRI1Q8N9T8 703 aaKnown RBP8.03□□□□□ -1.12
CDCA3-209ENST00000544610 ZNF341Q9BYN7 854 aa8.03□□□□□ -1.12
CDCA3-209ENST00000544610 LRRCC1Q9C099 1032 aa8.03□□□□□ -1.12
CDCA3-209ENST00000544610 ARHGAP39Q9C0H5 1083 aa8.03□□□□□ -1.12
CDCA3-209ENST00000544610 OSBPL3Q9H4L5 887 aa8.03□□□□□ -1.12
CDCA3-209ENST00000544610 ADGRA2Q96PE1 1338 aa8.03□□□□□ -1.12
CDCA3-209ENST00000544610 IL15P40933 162 aaPredicted RBP8.02□□□□□ -1.13
CDCA3-209ENST00000544610 RFX5P48382 616 aaPredicted RBP8.02□□□□□ -1.13
CDCA3-209ENST00000544610 FXR1P51114 621 aaKnown RBP eCLIP8.02□□□□□ -1.13
CDCA3-209ENST00000544610 KIF22Q14807 665 aa8.02□□□□□ -1.13
CDCA3-209ENST00000544610 SLC4A8Q2Y0W8 1093 aa8.02□□□□□ -1.13
CDCA3-209ENST00000544610 ANKRD23Q86SG2 305 aa8.02□□□□□ -1.13
CDCA3-209ENST00000544610 WDR66Q8TBY9 1149 aa8.02□□□□□ -1.13
CDCA3-209ENST00000544610 SH3TC2Q8TF17 1288 aa8.02□□□□□ -1.13
CDCA3-209ENST00000544610 FAM151AQ8WW52 585 aa8.02□□□□□ -1.13
CDCA3-209ENST00000544610 LPIN2Q92539 896 aa8.02□□□□□ -1.13
CDCA3-209ENST00000544610 C1orf115Q9H7X2 142 aa8.02□□□□□ -1.13
CDCA3-209ENST00000544610 ZNF112Q9UJU3 913 aa8.02□□□□□ -1.13
CDCA3-209ENST00000544610 KCNH4Q9UQ05 1017 aa8.02□□□□□ -1.13
CDCA3-209ENST00000544610 SZT2Q5T011 3432 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 ATRNL1Q5VV63 1379 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 EYA2O00167 538 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 IGSF3O75054 1194 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 SURF6O75683 361 aaKnown RBP8.01□□□□□ -1.13
CDCA3-209ENST00000544610 SLC5A1P13866 664 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 CTGFP29279 349 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 INPP5BP32019 993 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 NFIAQ12857 509 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 G3BP1Q13283 466 aaKnown RBP eCLIP8.01□□□□□ -1.13
CDCA3-209ENST00000544610 MOGSQ13724 837 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 NOL9Q5SY16 702 aaKnown RBP8.01□□□□□ -1.13
CDCA3-209ENST00000544610 MIGA2Q7L4E1 593 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 ATG9AQ7Z3C6 839 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 GPIHBP1Q8IV16 184 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 CLASRPQ8N2M8 674 aaKnown RBP8.01□□□□□ -1.13
CDCA3-209ENST00000544610 IL27Q8NEV9 243 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 RHPN1Q8TCX5 695 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 DDX27Q96GQ7 796 aaKnown RBP8.01□□□□□ -1.13
CDCA3-209ENST00000544610 TRIM47Q96LD4 638 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 STAP2Q9UGK3 403 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 SRRDQ9UH36 339 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 DAGLAQ9Y4D2 1042 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 SALL1Q9NSC2 1324 aa8.01□□□□□ -1.13
CDCA3-209ENST00000544610 RFX7Q2KHR2 1363 aa8□□□□□ -1.13
CDCA3-209ENST00000544610 PDHXO00330 501 aa8□□□□□ -1.13
CDCA3-209ENST00000544610 MYCP01106 439 aaPredicted RBP8□□□□□ -1.13
CDCA3-209ENST00000544610 PRDX5P30044 214 aa8□□□□□ -1.13
CDCA3-209ENST00000544610 PSMC4P43686 418 aa8□□□□□ -1.13
CDCA3-209ENST00000544610 MFSD10Q14728 455 aa8□□□□□ -1.13
CDCA3-209ENST00000544610 DIXDC1Q155Q3 683 aa8□□□□□ -1.13
CDCA3-209ENST00000544610 ANKRD45Q5TZF3 282 aa8□□□□□ -1.13
CDCA3-209ENST00000544610 CDC42EP5Q6NZY7 148 aa8□□□□□ -1.13
CDCA3-209ENST00000544610 SHISA4Q96DD7 197 aa8□□□□□ -1.13
CDCA3-209ENST00000544610 ZMYND15Q9H091 742 aa8□□□□□ -1.13
CDCA3-209ENST00000544610 FAM198AQ9UFP1 575 aa8□□□□□ -1.13
CDCA3-209ENST00000544610 CPA4Q9UI42 421 aa8□□□□□ -1.13
CDCA3-209ENST00000544610 TTC41PQ6P2S7 1318 aa8□□□□□ -1.13
CDCA3-209ENST00000544610 MYH13Q9UKX3 1938 aa7.99□□□□□ -1.13
CDCA3-209ENST00000544610 H0YGN5 161 aa7.99□□□□□ -1.13
CDCA3-209ENST00000544610 CXCL11O14625 94 aa7.99□□□□□ -1.13
CDCA3-209ENST00000544610 LDHBP07195 334 aaKnown RBP7.99□□□□□ -1.13
CDCA3-209ENST00000544610 BCRP11274 1271 aa7.99□□□□□ -1.13
CDCA3-209ENST00000544610 OSBPP22059 807 aa7.99□□□□□ -1.13
CDCA3-209ENST00000544610 IRX5P78411 483 aaPredicted RBP7.99□□□□□ -1.13
CDCA3-209ENST00000544610 TCP10Q12799 353 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms