RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 PLCD1P51178 756 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 EVCP57679 992 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 RTN1Q16799 776 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 FAM177A1Q8N128 213 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 STAG2Q8N3U4 1231 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 BLZF1Q9H2G9 400 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 USP17L3A6NCW0 530 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 USP17L4A6NCW7 530 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 SLC3A2P08195 630 aaKnown RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 RPS8P62241 208 aaKnown RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 RBM43Q6ZSC3 357 aaKnown RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 USP17L1Q7RTZ2 530 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 CLEC10AQ8IUN9 316 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 TDRD7Q8NHU6 1098 aaKnown RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 ZSCAN10Q96SZ4 725 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 XPO4Q9C0E2 1151 aaKnown RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 RTCBQ9Y3I0 505 aaKnown RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 SLC39A14Q15043 492 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 PIK3AP1Q6ZUJ8 805 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 FANCBQ8NB91 859 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 TGFBRAP1Q8WUH2 860 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 NSUN4Q96CB9 384 aaKnown RBP4.35□□□□□ -1.71
BRCA2-206ENST00000544455 ANO10Q9NW15 660 aa4.35□□□□□ -1.71
BRCA2-206ENST00000544455 RIOK3O14730 519 aaKnown RBP4.34□□□□□ -1.71
BRCA2-206ENST00000544455 SYKP43405 635 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 PKN1Q16512 942 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 STX1AQ16623 288 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 METTL16Q86W50 562 aaKnown RBP4.34□□□□□ -1.71
BRCA2-206ENST00000544455 CRACR2BQ8N4Y2 399 aaPredicted RBP4.34□□□□□ -1.71
BRCA2-206ENST00000544455 CSRNP2Q9H175 543 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 MCM9Q9NXL9 1143 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 KIAA1468Q9P260 1216 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 PP2D1A8MPX8 630 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 MCM7P33993 719 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 PTPAQ15257 358 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 CNNM3Q8NE01 707 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 DHX58Q96C10 678 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 EEF2KMTQ96G04 330 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 ZNF512BQ96KM6 892 aaPredicted RBP4.34□□□□□ -1.71
BRCA2-206ENST00000544455 DCP1AQ9NPI6 582 aaPredicted RBP4.34□□□□□ -1.71
BRCA2-206ENST00000544455 POLR3EQ9NVU0 708 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 THRAP3Q9Y2W1 955 aaKnown RBP4.34□□□□□ -1.71
BRCA2-206ENST00000544455 TSPY2A6NKD2 308 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 MSL1Q68DK7 614 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 SGMS1Q86VZ5 419 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 KIAA1524Q8TCG1 905 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 COL16A1Q07092 1604 aaPredicted RBP4.34□□□□□ -1.71
BRCA2-206ENST00000544455 TUBGCP6Q96RT7 1819 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 POLR2DO15514 142 aaKnown RBP4.34□□□□□ -1.71
BRCA2-206ENST00000544455 KLHL10Q6JEL2 608 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 BRAPQ7Z569 592 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 DZIP1Q86YF9 867 aaKnown RBP4.34□□□□□ -1.71
BRCA2-206ENST00000544455 NOSTRINQ8IVI9 506 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 CEP57L1Q8IYX8 460 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 GPIHBP1Q8IV16 184 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 FOXP4Q8IVH2 680 aaPredicted RBP4.34□□□□□ -1.71
BRCA2-206ENST00000544455 KCNG4Q8TDN1 519 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 TMEM87BQ96K49 555 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 KRT23Q9C075 422 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 VAT1LQ9HCJ6 419 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 SART3Q15020 963 aaKnown RBP4.34□□□□□ -1.71
BRCA2-206ENST00000544455 HOMER1Q86YM7 354 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 SH3RF3Q8TEJ3 882 aaPredicted RBP4.34□□□□□ -1.71
BRCA2-206ENST00000544455 CPLX3Q8WVH0 158 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 PRDM10Q9NQV6 1147 aa4.34□□□□□ -1.71
BRCA2-206ENST00000544455 SERPINC1P01008 464 aa4.34□□□□□ -1.72
BRCA2-206ENST00000544455 TNNT1P13805 278 aa4.34□□□□□ -1.72
BRCA2-206ENST00000544455 AK7Q96M32 723 aa4.34□□□□□ -1.72
BRCA2-206ENST00000544455 PCDHA5Q9Y5H7 936 aa4.34□□□□□ -1.72
BRCA2-206ENST00000544455 ZNF804BA4D1E1 1349 aa4.34□□□□□ -1.72
BRCA2-206ENST00000544455 SPDYE4A6NLX3 237 aa4.34□□□□□ -1.72
BRCA2-206ENST00000544455 GOLGA6L6A8MZA4 724 aa4.34□□□□□ -1.72
BRCA2-206ENST00000544455 TPTE2Q6XPS3 522 aa4.34□□□□□ -1.72
BRCA2-206ENST00000544455 MAPK8IP1Q9UQF2 711 aa4.34□□□□□ -1.72
BRCA2-206ENST00000544455 BCL9LQ86UU0 1499 aa4.34□□□□□ -1.72
BRCA2-206ENST00000544455 XIRP1Q702N8 1843 aaKnown RBP4.34□□□□□ -1.72
BRCA2-206ENST00000544455 VWA3AA6NCI4 1184 aa4.34□□□□□ -1.72
BRCA2-206ENST00000544455 TRIM37O94972 964 aa4.34□□□□□ -1.72
BRCA2-206ENST00000544455 SKILP12757 684 aa4.34□□□□□ -1.72
BRCA2-206ENST00000544455 CPLX2Q6PUV4 134 aaKnown RBP4.34□□□□□ -1.72
BRCA2-206ENST00000544455 BARGINQ6ZT62 677 aa4.34□□□□□ -1.72
BRCA2-206ENST00000544455 LRRC8AQ8IWT6 810 aa4.34□□□□□ -1.72
BRCA2-206ENST00000544455 PAPPAQ13219 1627 aa4.34□□□□□ -1.72
BRCA2-206ENST00000544455 TM4SF1P30408 202 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 USP5P45974 858 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 DOK7Q18PE1 504 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 STAG1Q8WVM7 1258 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 KCNQ5Q9NR82 932 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 GNL3LQ9NVN8 582 aaKnown RBP4.33□□□□□ -1.72
BRCA2-206ENST00000544455 PLEKHG2Q9H7P9 1386 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 SHANK3Q9BYB0 1731 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 YEATS4O95619 227 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 SRBD1Q8N5C6 995 aaKnown RBP4.33□□□□□ -1.72
BRCA2-206ENST00000544455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.33□□□□□ -1.72
BRCA2-206ENST00000544455 ERCC3P19447 782 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 GPSM2P81274 684 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 FMR1Q06787 632 aaKnown RBP eCLIP4.33□□□□□ -1.72
BRCA2-206ENST00000544455 DHX8Q14562 1220 aaKnown RBP4.33□□□□□ -1.72
BRCA2-206ENST00000544455 TRIM22Q8IYM9 498 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 CNNM2Q9H8M5 875 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms