RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 TAOK2Q9UL54 1235 aa11.85□□□□□ -0.51
C2CD3-220ENST00000544293 DENND2AQ9ULE3 1009 aa11.85□□□□□ -0.51
C2CD3-220ENST00000544293 PA2G4Q9UQ80 394 aaKnown RBP11.85□□□□□ -0.51
C2CD3-220ENST00000544293 LRRFIP2Q9Y608 721 aaKnown RBP11.85□□□□□ -0.51
C2CD3-220ENST00000544293 GPR75-ASB3A0A0A6YYF3 556 aa11.84□□□□□ -0.51
C2CD3-220ENST00000544293 CIAO1O76071 339 aa11.84□□□□□ -0.51
C2CD3-220ENST00000544293 BTDP43251 543 aa11.84□□□□□ -0.51
C2CD3-220ENST00000544293 TIMM10P62072 90 aa11.84□□□□□ -0.51
C2CD3-220ENST00000544293 COL25A1Q9BXS0 654 aaPredicted RBP11.84□□□□□ -0.51
C2CD3-220ENST00000544293 NBPF3Q9H094 633 aa11.84□□□□□ -0.51
C2CD3-220ENST00000544293 SIL1Q9H173 461 aa11.84□□□□□ -0.51
C2CD3-220ENST00000544293 ASCC2Q9H1I8 757 aaPredicted RBP11.84□□□□□ -0.51
C2CD3-220ENST00000544293 TXNRD2Q9NNW7 524 aa11.84□□□□□ -0.51
C2CD3-220ENST00000544293 POTEB2H3BUK9 544 aa11.83□□□□□ -0.52
C2CD3-220ENST00000544293 SEMA3EO15041 775 aa11.83□□□□□ -0.52
C2CD3-220ENST00000544293 HMGCRP04035 888 aa11.83□□□□□ -0.52
C2CD3-220ENST00000544293 ZEB1P37275 1124 aaPredicted RBP11.83□□□□□ -0.52
C2CD3-220ENST00000544293 PICALMQ13492 652 aa11.83□□□□□ -0.52
C2CD3-220ENST00000544293 Q3C1V9 767 aa11.83□□□□□ -0.52
C2CD3-220ENST00000544293 SH3D19Q5HYK7 790 aa11.83□□□□□ -0.52
C2CD3-220ENST00000544293 LHX8Q68G74 356 aa11.83□□□□□ -0.52
C2CD3-220ENST00000544293 TDHQ8IZJ6 230 aa11.83□□□□□ -0.52
C2CD3-220ENST00000544293 PROCA1Q8NCQ7 364 aaPredicted RBP11.83□□□□□ -0.52
C2CD3-220ENST00000544293 ZNF280CQ8ND82 737 aa11.83□□□□□ -0.52
C2CD3-220ENST00000544293 USP6NLQ92738 828 aa11.83□□□□□ -0.52
C2CD3-220ENST00000544293 C11orf49Q9H6J7 331 aa11.83□□□□□ -0.52
C2CD3-220ENST00000544293 CEP126Q9P2H0 1117 aa11.83□□□□□ -0.52
C2CD3-220ENST00000544293 MORF4L1Q9UBU8 362 aa11.83□□□□□ -0.52
C2CD3-220ENST00000544293 FBXO3Q9UK99 471 aa11.83□□□□□ -0.52
C2CD3-220ENST00000544293 PTPRCP08575 1304 aa11.83□□□□□ -0.52
C2CD3-220ENST00000544293 HMGCS2P54868 508 aa11.82□□□□□ -0.52
C2CD3-220ENST00000544293 MECOMQ03112 1051 aa11.82□□□□□ -0.52
C2CD3-220ENST00000544293 SHROOM1Q2M3G4 852 aaPredicted RBP11.82□□□□□ -0.52
C2CD3-220ENST00000544293 ZSCAN29Q8IWY8 852 aaPredicted RBP11.82□□□□□ -0.52
C2CD3-220ENST00000544293 GUCD1Q96NT3 240 aa11.82□□□□□ -0.52
C2CD3-220ENST00000544293 P2RX7Q99572 595 aaKnown RBP11.82□□□□□ -0.52
C2CD3-220ENST00000544293 HMX1Q9NP08 348 aaPredicted RBP11.82□□□□□ -0.52
C2CD3-220ENST00000544293 COPRSQ9NQ92 184 aa11.82□□□□□ -0.52
C2CD3-220ENST00000544293 GNL3LQ9NVN8 582 aaKnown RBP11.82□□□□□ -0.52
C2CD3-220ENST00000544293 CYP2B6P20813 491 aa11.81□□□□□ -0.52
C2CD3-220ENST00000544293 CAP2P40123 477 aa11.81□□□□□ -0.52
C2CD3-220ENST00000544293 IL15P40933 162 aaPredicted RBP11.81□□□□□ -0.52
C2CD3-220ENST00000544293 GCLCP48506 637 aaPredicted RBP11.81□□□□□ -0.52
C2CD3-220ENST00000544293 LRRC26Q2I0M4 334 aa11.81□□□□□ -0.52
C2CD3-220ENST00000544293 OSBPL5Q9H0X9 879 aaPredicted RBP11.81□□□□□ -0.52
C2CD3-220ENST00000544293 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.81□□□□□ -0.52
C2CD3-220ENST00000544293 RBPJLQ9UBG7 517 aa11.81□□□□□ -0.52
C2CD3-220ENST00000544293 MROH7-TTC4A0A0A0MT08 1334 aa11.81□□□□□ -0.52
C2CD3-220ENST00000544293 PRKAR2AP13861 404 aaKnown RBP11.8□□□□□ -0.52
C2CD3-220ENST00000544293 CCND3P30281 292 aaPredicted RBP11.8□□□□□ -0.52
C2CD3-220ENST00000544293 HOXA7P31268 230 aaPredicted RBP11.8□□□□□ -0.52
C2CD3-220ENST00000544293 CACNB2Q08289 660 aaPredicted RBP11.8□□□□□ -0.52
C2CD3-220ENST00000544293 CCL14Q16627 93 aa11.8□□□□□ -0.52
C2CD3-220ENST00000544293 PI16Q6UXB8 463 aa11.8□□□□□ -0.52
C2CD3-220ENST00000544293 TBC1D9Q6ZT07 1266 aa11.8□□□□□ -0.52
C2CD3-220ENST00000544293 NSUN4Q96CB9 384 aaKnown RBP11.8□□□□□ -0.52
C2CD3-220ENST00000544293 DNAJC18Q9H819 358 aa11.8□□□□□ -0.52
C2CD3-220ENST00000544293 HMG20BQ9P0W2 317 aa11.8□□□□□ -0.52
C2CD3-220ENST00000544293 ABCF2Q9UG63 623 aa11.8□□□□□ -0.52
C2CD3-220ENST00000544293 PDS5AQ29RF7 1337 aaKnown RBP11.8□□□□□ -0.52
C2CD3-220ENST00000544293 XRCC5P13010 732 aaKnown RBP11.79□□□□□ -0.52
C2CD3-220ENST00000544293 XAGE2Q96GT9 111 aa11.79□□□□□ -0.52
C2CD3-220ENST00000544293 WDR18Q9BV38 432 aa11.79□□□□□ -0.52
C2CD3-220ENST00000544293 UBE2OQ9C0C9 1292 aaKnown RBP11.79□□□□□ -0.52
C2CD3-220ENST00000544293 PORCNQ9H237 461 aa11.79□□□□□ -0.52
C2CD3-220ENST00000544293 PNMA3Q9UL41 463 aa11.79□□□□□ -0.52
C2CD3-220ENST00000544293 CACNA1FO60840 1977 aa11.79□□□□□ -0.52
C2CD3-220ENST00000544293 DOCK3Q8IZD9 2030 aa11.79□□□□□ -0.52
C2CD3-220ENST00000544293 A0A1B0GUL7 405 aa11.78□□□□□ -0.52
C2CD3-220ENST00000544293 USP17L5A8MUK1 530 aa11.78□□□□□ -0.52
C2CD3-220ENST00000544293 IGHA2P01877 340 aa11.78□□□□□ -0.52
C2CD3-220ENST00000544293 BACE1P56817 501 aa11.78□□□□□ -0.52
C2CD3-220ENST00000544293 MDM2Q00987 491 aaPredicted RBP11.78□□□□□ -0.52
C2CD3-220ENST00000544293 TFCP2Q12800 502 aa11.78□□□□□ -0.52
C2CD3-220ENST00000544293 MORN1Q5T089 497 aa11.78□□□□□ -0.52
C2CD3-220ENST00000544293 METTL16Q86W50 562 aaKnown RBP11.78□□□□□ -0.52
C2CD3-220ENST00000544293 DZIP1Q86YF9 867 aaKnown RBP11.78□□□□□ -0.52
C2CD3-220ENST00000544293 ZGPATQ8N5A5 531 aaKnown RBP11.78□□□□□ -0.52
C2CD3-220ENST00000544293 ALPK3Q96L96 1907 aa11.78□□□□□ -0.52
C2CD3-220ENST00000544293 VCANP13611 3396 aa11.78□□□□□ -0.52
C2CD3-220ENST00000544293 CNMDO75829 334 aa11.77□□□□□ -0.53
C2CD3-220ENST00000544293 SLFN5Q08AF3 891 aa11.77□□□□□ -0.53
C2CD3-220ENST00000544293 MTMR2Q13614 643 aa11.77□□□□□ -0.53
C2CD3-220ENST00000544293 FAM109BQ6ICB4 259 aaPredicted RBP11.77□□□□□ -0.53
C2CD3-220ENST00000544293 ERICH6Q7L0X2 663 aa11.77□□□□□ -0.53
C2CD3-220ENST00000544293 FAM9BQ8IZU0 186 aa11.77□□□□□ -0.53
C2CD3-220ENST00000544293 EMILIN3Q9NT22 766 aa11.77□□□□□ -0.53
C2CD3-220ENST00000544293 FLRT1Q9NZU1 646 aa11.77□□□□□ -0.53
C2CD3-220ENST00000544293 UNC80Q8N2C7 3258 aa11.77□□□□□ -0.53
C2CD3-220ENST00000544293 UBTFL1P0CB47 393 aaPredicted RBP11.76□□□□□ -0.53
C2CD3-220ENST00000544293 HERVK_113P62684 666 aa11.76□□□□□ -0.53
C2CD3-220ENST00000544293 SPTY2D1Q68D10 685 aaPredicted RBP11.76□□□□□ -0.53
C2CD3-220ENST00000544293 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.76□□□□□ -0.53
C2CD3-220ENST00000544293 SLF2Q8IX21 1173 aa11.76□□□□□ -0.53
C2CD3-220ENST00000544293 TRMT2AQ8IZ69 625 aaKnown RBP11.76□□□□□ -0.53
C2CD3-220ENST00000544293 GPRC5AQ8NFJ5 357 aa11.76□□□□□ -0.53
C2CD3-220ENST00000544293 SH3RF3Q8TEJ3 882 aaPredicted RBP11.76□□□□□ -0.53
C2CD3-220ENST00000544293 CDCA7LQ96GN5 454 aa11.76□□□□□ -0.53
C2CD3-220ENST00000544293 MEIS3Q99687 375 aa11.76□□□□□ -0.53
C2CD3-220ENST00000544293 NUDT12Q9BQG2 462 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms