RNA–Protein interactions for RNA: ENST00000544105.5

LDHC-208, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-208ENST00000544105 EVCP57679 992 aa12.14□□□□□ -0.47
LDHC-208ENST00000544105 HMGN5P82970 282 aaKnown RBP12.14□□□□□ -0.47
LDHC-208ENST00000544105 TMEM67Q5HYA8 995 aa12.14□□□□□ -0.47
LDHC-208ENST00000544105 STRIP1Q5VSL9 837 aa12.14□□□□□ -0.47
LDHC-208ENST00000544105 LARP1BQ659C4 914 aaKnown RBP12.14□□□□□ -0.47
LDHC-208ENST00000544105 CTR9Q6PD62 1173 aa12.14□□□□□ -0.47
LDHC-208ENST00000544105 OLFM4Q6UX06 510 aa12.14□□□□□ -0.47
LDHC-208ENST00000544105 SLC51AQ86UW1 340 aa12.14□□□□□ -0.47
LDHC-208ENST00000544105 ZNF384Q8TF68 577 aa12.14□□□□□ -0.47
LDHC-208ENST00000544105 C7orf43Q8WVR3 580 aa12.14□□□□□ -0.47
LDHC-208ENST00000544105 DCP1AQ9NPI6 582 aaPredicted RBP12.14□□□□□ -0.47
LDHC-208ENST00000544105 MCM9Q9NXL9 1143 aa12.14□□□□□ -0.47
LDHC-208ENST00000544105 MAST2Q6P0Q8 1798 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 CACNA1SQ13698 1873 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 KLF18A0A0U1RQI7 1052 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 USP17L3A6NCW0 530 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 USP17L4A6NCW7 530 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 CPLX1O14810 134 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 PPIP5K2O43314 1243 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 STX6O43752 255 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 ECE2O60344 883 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 POLR3DP05423 398 aaPredicted RBP12.13□□□□□ -0.47
LDHC-208ENST00000544105 PDIA3P30101 505 aaKnown RBP12.13□□□□□ -0.47
LDHC-208ENST00000544105 KIAA2012Q0VF49 1180 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 DIXDC1Q155Q3 683 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 CLEC17AQ6ZS10 378 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 USP17L1Q7RTZ2 530 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 IQCA1Q86XH1 822 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 TEX11Q8IYF3 940 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 SH3RF3Q8TEJ3 882 aaPredicted RBP12.13□□□□□ -0.47
LDHC-208ENST00000544105 NBPF3Q9H094 633 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 DBNDD1Q9H9R9 158 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 ZSWIM5Q9P217 1185 aa12.13□□□□□ -0.47
LDHC-208ENST00000544105 TTF2Q9UNY4 1162 aaKnown RBP12.13□□□□□ -0.47
LDHC-208ENST00000544105 COL11A2P13942 1736 aaPredicted RBP12.13□□□□□ -0.47
LDHC-208ENST00000544105 GOLGA8BA8MQT2 603 aa12.12□□□□□ -0.47
LDHC-208ENST00000544105 CDKL5O76039 1030 aa12.12□□□□□ -0.47
LDHC-208ENST00000544105 BRD1O95696 1058 aa12.12□□□□□ -0.47
LDHC-208ENST00000544105 LIFRP42702 1097 aa12.12□□□□□ -0.47
LDHC-208ENST00000544105 WTAPQ15007 396 aa12.12□□□□□ -0.47
LDHC-208ENST00000544105 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
LDHC-208ENST00000544105 SKOR2Q2VWA4 1001 aaPredicted RBP12.12□□□□□ -0.47
LDHC-208ENST00000544105 CCDC178Q5BJE1 867 aa12.12□□□□□ -0.47
LDHC-208ENST00000544105 CYB5R4Q7L1T6 521 aa12.12□□□□□ -0.47
LDHC-208ENST00000544105 STK11IPQ8N1F8 1099 aa12.12□□□□□ -0.47
LDHC-208ENST00000544105 TGFBRAP1Q8WUH2 860 aa12.12□□□□□ -0.47
LDHC-208ENST00000544105 TEKT1Q969V4 418 aa12.12□□□□□ -0.47
LDHC-208ENST00000544105 PSMD1Q99460 953 aa12.12□□□□□ -0.47
LDHC-208ENST00000544105 MRIQ9BWK5 157 aa12.12□□□□□ -0.47
LDHC-208ENST00000544105 SLC12A7Q9Y666 1083 aa12.12□□□□□ -0.47
LDHC-208ENST00000544105 LTBP1Q14766 1721 aa12.11□□□□□ -0.47
LDHC-208ENST00000544105 CCDC196A0A1B0GTZ2 297 aa12.11□□□□□ -0.47
LDHC-208ENST00000544105 F8W031 263 aaPredicted RBP12.11□□□□□ -0.47
LDHC-208ENST00000544105 H3BQV1 296 aa12.11□□□□□ -0.47
LDHC-208ENST00000544105 SH2B2O14492 632 aaPredicted RBP12.11□□□□□ -0.47
LDHC-208ENST00000544105 ZBTB43O43298 467 aa12.11□□□□□ -0.47
LDHC-208ENST00000544105 ORC4O43929 436 aa12.11□□□□□ -0.47
LDHC-208ENST00000544105 RANBP6O60518 1105 aaKnown RBP12.11□□□□□ -0.47
LDHC-208ENST00000544105 BAG4O95429 457 aaKnown RBP12.11□□□□□ -0.47
LDHC-208ENST00000544105 ZSCAN22P10073 491 aaPredicted RBP12.11□□□□□ -0.47
LDHC-208ENST00000544105 SYT1P21579 422 aa12.11□□□□□ -0.47
LDHC-208ENST00000544105 ANTXR2P58335 489 aa12.11□□□□□ -0.47
LDHC-208ENST00000544105 CCT2P78371 535 aaKnown RBP12.11□□□□□ -0.47
LDHC-208ENST00000544105 HDLBPQ00341 1268 aaKnown RBP12.11□□□□□ -0.47
LDHC-208ENST00000544105 SCRN1Q12765 414 aa12.11□□□□□ -0.47
LDHC-208ENST00000544105 GRIK5Q16478 980 aa12.11□□□□□ -0.47
LDHC-208ENST00000544105 AOC3Q16853 763 aa12.11□□□□□ -0.47
LDHC-208ENST00000544105 DALRD3Q5D0E6 543 aaKnown RBP12.11□□□□□ -0.47
LDHC-208ENST00000544105 IFFO2Q5TF58 517 aa12.11□□□□□ -0.47
LDHC-208ENST00000544105 HHIPL2Q6UWX4 724 aa12.11□□□□□ -0.47
LDHC-208ENST00000544105 UPF1Q92900 1129 aaKnown RBP eCLIP12.11□□□□□ -0.47
LDHC-208ENST00000544105 MKNK2Q9HBH9 465 aa12.11□□□□□ -0.47
LDHC-208ENST00000544105 PPP1R1BQ9UD71 204 aaPredicted RBP12.11□□□□□ -0.47
LDHC-208ENST00000544105 CD2APQ9Y5K6 639 aa12.11□□□□□ -0.47
LDHC-208ENST00000544105 GAKO14976 1311 aa12.11□□□□□ -0.47
LDHC-208ENST00000544105 NEDD4P46934 1319 aa12.11□□□□□ -0.47
LDHC-208ENST00000544105 VPS37CA5D8V6 355 aaPredicted RBP12.1□□□□□ -0.47
LDHC-208ENST00000544105 NCLP19338 710 aaKnown RBP12.1□□□□□ -0.47
LDHC-208ENST00000544105 METAP2P50579 478 aaKnown RBP eCLIP12.1□□□□□ -0.47
LDHC-208ENST00000544105 COL9A3Q14050 684 aaPredicted RBP12.1□□□□□ -0.47
LDHC-208ENST00000544105 PPP2R5BQ15173 497 aa12.1□□□□□ -0.47
LDHC-208ENST00000544105 CSPP1Q1MSJ5 1256 aa12.1□□□□□ -0.47
LDHC-208ENST00000544105 C12orf60Q5U649 245 aa12.1□□□□□ -0.47
LDHC-208ENST00000544105 FOXD4L5Q5VV16 416 aaPredicted RBP12.1□□□□□ -0.47
LDHC-208ENST00000544105 TTC6Q86TZ1 520 aa12.1□□□□□ -0.47
LDHC-208ENST00000544105 ZNF444Q8N0Y2 327 aaPredicted RBP12.1□□□□□ -0.47
LDHC-208ENST00000544105 LARGE2Q8N3Y3 721 aa12.1□□□□□ -0.47
LDHC-208ENST00000544105 IGDCC4Q8TDY8 1250 aa12.1□□□□□ -0.47
LDHC-208ENST00000544105 FOXD4L4Q8WXT5 416 aaPredicted RBP12.1□□□□□ -0.47
LDHC-208ENST00000544105 USP40Q9NVE5 1235 aa12.1□□□□□ -0.47
LDHC-208ENST00000544105 LAMA4Q16363 1823 aa12.09□□□□□ -0.47
LDHC-208ENST00000544105 SLX4Q8IY92 1834 aa12.09□□□□□ -0.47
LDHC-208ENST00000544105 TSPY2A6NKD2 308 aa12.09□□□□□ -0.47
LDHC-208ENST00000544105 RIOK3O14730 519 aaKnown RBP12.09□□□□□ -0.47
LDHC-208ENST00000544105 FGRP09769 529 aa12.09□□□□□ -0.47
LDHC-208ENST00000544105 USP17L8P0C7I0 530 aa12.09□□□□□ -0.47
LDHC-208ENST00000544105 CALM1P0DP23 149 aa12.09□□□□□ -0.47
LDHC-208ENST00000544105 CALM2P0DP24 149 aa12.09□□□□□ -0.47
LDHC-208ENST00000544105 CALM3P0DP25 149 aa12.09□□□□□ -0.47
LDHC-208ENST00000544105 KCNA3P22001 575 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms