RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 DSCC1Q9BVC3 393 aa17.27■□□□□ 0.36
TNFRSF1A-216ENST00000543995 ZNF341Q9BYN7 854 aa17.27■□□□□ 0.36
TNFRSF1A-216ENST00000543995 SERPINB13Q9UIV8 391 aa17.27■□□□□ 0.36
TNFRSF1A-216ENST00000543995 FAM196BA6NMK8 535 aa17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 FGAP02671 866 aa17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 SLURP2P0DP57 97 aa17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 IREB2P48200 963 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 APLP1P51693 650 aa17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 FKBP1BP68106 108 aa17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 SBK1Q52WX2 424 aa17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 C12orf60Q5U649 245 aa17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 MOB2Q70IA6 237 aa17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 ANO2Q9NQ90 1003 aa17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 HERC5Q9UII4 1024 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 ABT1Q9ULW3 272 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 TBC1D12O60347 775 aa17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 USP2O75604 605 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 ALX1Q15699 326 aa17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 STK11IPQ8N1F8 1099 aa17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 EHD4Q9H223 541 aa17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF1A-216ENST00000543995 MYH8P13535 1937 aa17.25■□□□□ 0.35
TNFRSF1A-216ENST00000543995 ZMYM6O95789 1325 aa17.25■□□□□ 0.35
TNFRSF1A-216ENST00000543995 PTH1RQ03431 593 aa17.25■□□□□ 0.35
TNFRSF1A-216ENST00000543995 EVX2Q03828 476 aa17.25■□□□□ 0.35
TNFRSF1A-216ENST00000543995 PPARAQ07869 468 aa17.25■□□□□ 0.35
TNFRSF1A-216ENST00000543995 WRNIP1Q96S55 665 aa17.25■□□□□ 0.35
TNFRSF1A-216ENST00000543995 UBE2Q2LH0YL09 131 aa17.24■□□□□ 0.35
TNFRSF1A-216ENST00000543995 SLC3A2P08195 630 aaKnown RBP17.24■□□□□ 0.35
TNFRSF1A-216ENST00000543995 KLRG1Q96E93 195 aa17.24■□□□□ 0.35
TNFRSF1A-216ENST00000543995 DYNLL2Q96FJ2 89 aa17.24■□□□□ 0.35
TNFRSF1A-216ENST00000543995 CTNNA3Q9UI47 895 aa17.24■□□□□ 0.35
TNFRSF1A-216ENST00000543995 SMIM22K7EJ46 135 aa17.23■□□□□ 0.35
TNFRSF1A-216ENST00000543995 HUNKP57058 714 aa17.23■□□□□ 0.35
TNFRSF1A-216ENST00000543995 MAP3K10Q02779 954 aa17.23■□□□□ 0.35
TNFRSF1A-216ENST00000543995 MAP3K11Q16584 847 aa17.23■□□□□ 0.35
TNFRSF1A-216ENST00000543995 DNAJC18Q9H819 358 aa17.23■□□□□ 0.35
TNFRSF1A-216ENST00000543995 CREBZFQ9NS37 354 aa17.23■□□□□ 0.35
TNFRSF1A-216ENST00000543995 SWAP70Q9UH65 585 aa17.23■□□□□ 0.35
TNFRSF1A-216ENST00000543995 TLL2Q9Y6L7 1015 aa17.23■□□□□ 0.35
TNFRSF1A-216ENST00000543995 OTOFQ9HC10 1997 aa17.23■□□□□ 0.35
TNFRSF1A-216ENST00000543995 ZNF213O14771 459 aa17.22■□□□□ 0.35
TNFRSF1A-216ENST00000543995 HAND2P61296 217 aa17.22■□□□□ 0.35
TNFRSF1A-216ENST00000543995 MAP3K9P80192 1104 aa17.22■□□□□ 0.35
TNFRSF1A-216ENST00000543995 SAPCD2Q86UD0 394 aa17.22■□□□□ 0.35
TNFRSF1A-216ENST00000543995 METTL16Q86W50 562 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-216ENST00000543995 ANKRD13AQ8IZ07 590 aa17.22■□□□□ 0.35
TNFRSF1A-216ENST00000543995 LSG1Q9H089 658 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-216ENST00000543995 CSADQ9Y600 493 aa17.22■□□□□ 0.35
TNFRSF1A-216ENST00000543995 U3KPZ7 1027 aaPredicted RBP17.22■□□□□ 0.35
TNFRSF1A-216ENST00000543995 LAMA4Q16363 1823 aa17.22■□□□□ 0.35
TNFRSF1A-216ENST00000543995 REC8O95072 547 aa17.21■□□□□ 0.35
TNFRSF1A-216ENST00000543995 CTDSPL2Q05D32 466 aa17.21■□□□□ 0.35
TNFRSF1A-216ENST00000543995 GABPAQ06546 454 aa17.21■□□□□ 0.35
TNFRSF1A-216ENST00000543995 IMMTQ16891 758 aaKnown RBP17.21■□□□□ 0.35
TNFRSF1A-216ENST00000543995 C16orf86Q6ZW13 317 aa17.21■□□□□ 0.35
TNFRSF1A-216ENST00000543995 SLC44A5Q8NCS7 719 aa17.21■□□□□ 0.35
TNFRSF1A-216ENST00000543995 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.21■□□□□ 0.353e-7■■■■□ 25.5
TNFRSF1A-216ENST00000543995 MAP4K1Q92918 833 aa17.21■□□□□ 0.35
TNFRSF1A-216ENST00000543995 ZKSCAN4Q969J2 545 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1A-216ENST00000543995 MKNK2Q9HBH9 465 aa17.21■□□□□ 0.35
TNFRSF1A-216ENST00000543995 ZNF287Q9HBT7 754 aa17.21■□□□□ 0.35
TNFRSF1A-216ENST00000543995 TAOK2Q9UL54 1235 aa17.21■□□□□ 0.35
TNFRSF1A-216ENST00000543995 ROBO3Q96MS0 1386 aa17.21■□□□□ 0.35
TNFRSF1A-216ENST00000543995 ATAD5Q96QE3 1844 aa17.21■□□□□ 0.35
TNFRSF1A-216ENST00000543995 PHF20L1A8MW92 1017 aa17.21■□□□□ 0.34
TNFRSF1A-216ENST00000543995 HSPA6P17066 643 aa17.21■□□□□ 0.34
TNFRSF1A-216ENST00000543995 INPP5BP32019 993 aa17.21■□□□□ 0.34
TNFRSF1A-216ENST00000543995 CDK8P49336 464 aa17.21■□□□□ 0.34
TNFRSF1A-216ENST00000543995 PDE4BQ07343 736 aa17.21■□□□□ 0.34
TNFRSF1A-216ENST00000543995 ZNF112Q9UJU3 913 aa17.21■□□□□ 0.34
TNFRSF1A-216ENST00000543995 RBM8AQ9Y5S9 174 aaKnown RBP17.21■□□□□ 0.34
TNFRSF1A-216ENST00000543995 SHMT1P34896 483 aa17.2■□□□□ 0.34
TNFRSF1A-216ENST00000543995 VGLL4Q14135 290 aa17.2■□□□□ 0.34
TNFRSF1A-216ENST00000543995 DOCK1Q14185 1865 aa17.2■□□□□ 0.34
TNFRSF1A-216ENST00000543995 CERKLQ49MI3 558 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1A-216ENST00000543995 LDLRAD1Q5T700 205 aa17.2■□□□□ 0.34
TNFRSF1A-216ENST00000543995 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1A-216ENST00000543995 PAXIP1Q6ZW49 1069 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1A-216ENST00000543995 ANAPC4Q9UJX5 808 aa17.2■□□□□ 0.34
TNFRSF1A-216ENST00000543995 CTNND1O60716 968 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1A-216ENST00000543995 GDF11O95390 407 aa17.19■□□□□ 0.34
TNFRSF1A-216ENST00000543995 CAP2P40123 477 aa17.19■□□□□ 0.34
TNFRSF1A-216ENST00000543995 TATDN1Q6P1N9 297 aa17.19■□□□□ 0.34
TNFRSF1A-216ENST00000543995 SLC10A4Q96EP9 437 aa17.19■□□□□ 0.34
TNFRSF1A-216ENST00000543995 CLMNQ96JQ2 1002 aa17.19■□□□□ 0.34
TNFRSF1A-216ENST00000543995 ELP3Q9H9T3 547 aa17.19■□□□□ 0.34
TNFRSF1A-216ENST00000543995 TOMM22Q9NS69 142 aa17.19■□□□□ 0.34
TNFRSF1A-216ENST00000543995 UNCXA6NJT0 531 aa17.18■□□□□ 0.34
TNFRSF1A-216ENST00000543995 MPHOSPH10O00566 681 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1A-216ENST00000543995 PRDM1O75626 825 aa17.18■□□□□ 0.34
TNFRSF1A-216ENST00000543995 ZNF157P51786 506 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF1A-216ENST00000543995 HTRA3P83110 453 aa17.18■□□□□ 0.34
TNFRSF1A-216ENST00000543995 RRP1BQ14684 758 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1A-216ENST00000543995 SCYL3Q8IZE3 742 aa17.18■□□□□ 0.34
TNFRSF1A-216ENST00000543995 ZNF444Q8N0Y2 327 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF1A-216ENST00000543995 PICK1Q9NRD5 415 aa17.18■□□□□ 0.34
TNFRSF1A-216ENST00000543995 EIF5BO60841 1220 aaKnown RBP17.17■□□□□ 0.34
TNFRSF1A-216ENST00000543995 ABCB5Q2M3G0 1257 aa17.17■□□□□ 0.34
TNFRSF1A-216ENST00000543995 DEFB115Q30KQ5 88 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms