RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 TRPA1O75762 1119 aa26.28■■□□□ 1.8
OTUB1-212ENST00000543988 PPIL2Q13356 520 aa26.28■■□□□ 1.8
OTUB1-212ENST00000543988 SCYL3Q8IZE3 742 aa26.28■■□□□ 1.8
OTUB1-212ENST00000543988 SDR42E1Q8WUS8 393 aa26.28■■□□□ 1.8
OTUB1-212ENST00000543988 PUS7LQ9H0K6 701 aaKnown RBP26.28■■□□□ 1.8
OTUB1-212ENST00000543988 DNAJC18Q9H819 358 aa26.28■■□□□ 1.8
OTUB1-212ENST00000543988 HERC5Q9UII4 1024 aaKnown RBP26.28■■□□□ 1.8
OTUB1-212ENST00000543988 PRKAB2O43741 272 aa26.27■■□□□ 1.8
OTUB1-212ENST00000543988 HLA-DOAP06340 250 aa26.27■■□□□ 1.8
OTUB1-212ENST00000543988 METTL16Q86W50 562 aaKnown RBP26.27■■□□□ 1.8
OTUB1-212ENST00000543988 MS4A4AQ96JQ5 239 aa26.27■■□□□ 1.8
OTUB1-212ENST00000543988 FSD1Q9BTV5 496 aa26.27■■□□□ 1.8
OTUB1-212ENST00000543988 SIPA1L1O43166 1804 aa26.27■■□□□ 1.8
OTUB1-212ENST00000543988 DDX60LQ5H9U9 1706 aaKnown RBP26.26■■□□□ 1.79
OTUB1-212ENST00000543988 IRF6O14896 467 aa26.26■■□□□ 1.79
OTUB1-212ENST00000543988 CTNND1O60716 968 aaKnown RBP26.26■■□□□ 1.79
OTUB1-212ENST00000543988 ZFYP08048 801 aaPredicted RBP26.26■■□□□ 1.79
OTUB1-212ENST00000543988 PPATQ06203 517 aa26.26■■□□□ 1.79
OTUB1-212ENST00000543988 RRP1BQ14684 758 aaKnown RBP26.26■■□□□ 1.79
OTUB1-212ENST00000543988 PLEKHM2Q8IWE5 1019 aa26.26■■□□□ 1.79
OTUB1-212ENST00000543988 APPBP2Q92624 585 aa26.26■■□□□ 1.79
OTUB1-212ENST00000543988 PICK1Q9NRD5 415 aa26.26■■□□□ 1.79
OTUB1-212ENST00000543988 IGF2BP3O00425 579 aaKnown RBP eCLIP26.25■■□□□ 1.79
OTUB1-212ENST00000543988 GTF2A2P52657 109 aa26.25■■□□□ 1.79
OTUB1-212ENST00000543988 IFNL1Q8IU54 200 aa26.25■■□□□ 1.79
OTUB1-212ENST00000543988 CRACR2BQ8N4Y2 399 aaPredicted RBP26.25■■□□□ 1.79
OTUB1-212ENST00000543988 BRI3BPQ8WY22 251 aa26.25■■□□□ 1.79
OTUB1-212ENST00000543988 OSBP2Q969R2 916 aa26.25■■□□□ 1.79
OTUB1-212ENST00000543988 DCP1AQ9NPI6 582 aaPredicted RBP26.25■■□□□ 1.79
OTUB1-212ENST00000543988 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.25■■□□□ 1.79
OTUB1-212ENST00000543988 TESPA1A2RU30 521 aaPredicted RBP26.24■■□□□ 1.79
OTUB1-212ENST00000543988 INHBEP58166 350 aa26.24■■□□□ 1.79
OTUB1-212ENST00000543988 FOXP4Q8IVH2 680 aaPredicted RBP26.24■■□□□ 1.79
OTUB1-212ENST00000543988 PRDM10Q9NQV6 1147 aa26.24■■□□□ 1.79
OTUB1-212ENST00000543988 MYH7P12883 1935 aa26.24■■□□□ 1.79
OTUB1-212ENST00000543988 CCL15-CCL14A0A0B4J2E2 113 aa26.23■■□□□ 1.79
OTUB1-212ENST00000543988 PTPRAP18433 802 aa26.23■■□□□ 1.79
OTUB1-212ENST00000543988 CCL15Q16663 113 aa26.23■■□□□ 1.79
OTUB1-212ENST00000543988 LRRFIP1Q32MZ4 808 aaKnown RBP26.23■■□□□ 1.79
OTUB1-212ENST00000543988 PTPN18Q99952 460 aa26.23■■□□□ 1.79
OTUB1-212ENST00000543988 TRIM34Q9BYJ4 488 aa26.23■■□□□ 1.79
OTUB1-212ENST00000543988 MCM9Q9NXL9 1143 aa26.23■■□□□ 1.79
OTUB1-212ENST00000543988 LAMB1P07942 1786 aa26.23■■□□□ 1.79
OTUB1-212ENST00000543988 NAV1Q8NEY1 1877 aa26.22■■□□□ 1.79
OTUB1-212ENST00000543988 M0R2C6 588 aa26.22■■□□□ 1.79
OTUB1-212ENST00000543988 EVX2Q03828 476 aa26.22■■□□□ 1.79
OTUB1-212ENST00000543988 SNAPC2Q13487 334 aa26.22■■□□□ 1.79
OTUB1-212ENST00000543988 COL13A1Q5TAT6 717 aaPredicted RBP26.22■■□□□ 1.79
OTUB1-212ENST00000543988 CCDC84Q86UT8 332 aaPredicted RBP26.22■■□□□ 1.79
OTUB1-212ENST00000543988 EVI5LQ96CN4 794 aa26.22■■□□□ 1.79
OTUB1-212ENST00000543988 STRBPQ96SI9 672 aaKnown RBP26.22■■□□□ 1.79
OTUB1-212ENST00000543988 EHD4Q9H223 541 aa26.22■■□□□ 1.79
OTUB1-212ENST00000543988 KCNH4Q9UQ05 1017 aa26.22■■□□□ 1.79
OTUB1-212ENST00000543988 SLC4A4Q9Y6R1 1079 aa26.22■■□□□ 1.79
OTUB1-212ENST00000543988 POLR3DP05423 398 aaPredicted RBP26.21■■□□□ 1.79
OTUB1-212ENST00000543988 CYP2D6P10635 497 aa26.21■■□□□ 1.79
OTUB1-212ENST00000543988 PDE4AP27815 886 aa26.21■■□□□ 1.79
OTUB1-212ENST00000543988 CAP2P40123 477 aa26.21■■□□□ 1.79
OTUB1-212ENST00000543988 PLCD1P51178 756 aa26.21■■□□□ 1.79
OTUB1-212ENST00000543988 TTC6Q86TZ1 520 aa26.21■■□□□ 1.79
OTUB1-212ENST00000543988 OSBPL3Q9H4L5 887 aa26.21■■□□□ 1.79
OTUB1-212ENST00000543988 ATP8A2Q9NTI2 1148 aa26.21■■□□□ 1.79
OTUB1-212ENST00000543988 SERPINB13Q9UIV8 391 aa26.21■■□□□ 1.79
OTUB1-212ENST00000543988 ZHX2Q9Y6X8 837 aa26.21■■□□□ 1.79
OTUB1-212ENST00000543988 CETPP11597 493 aa26.2■■□□□ 1.78
OTUB1-212ENST00000543988 ZMYM1Q5SVZ6 1142 aa26.2■■□□□ 1.78
OTUB1-212ENST00000543988 DOCK1Q14185 1865 aa26.19■■□□□ 1.78
OTUB1-212ENST00000543988 GPAA1O43292 621 aa26.19■■□□□ 1.78
OTUB1-212ENST00000543988 TBC1D8O95759 1140 aa26.19■■□□□ 1.78
OTUB1-212ENST00000543988 JAG1P78504 1218 aa26.19■■□□□ 1.78
OTUB1-212ENST00000543988 SHROOM1Q2M3G4 852 aaPredicted RBP26.19■■□□□ 1.78
OTUB1-212ENST00000543988 SEC62Q99442 399 aaKnown RBP26.19■■□□□ 1.78
OTUB1-212ENST00000543988 ALDH1A1P00352 501 aa26.18■■□□□ 1.78
OTUB1-212ENST00000543988 R3HDMLQ9H3Y0 253 aa26.18■■□□□ 1.78
OTUB1-212ENST00000543988 MYH1P12882 1939 aa26.18■■□□□ 1.78
OTUB1-212ENST00000543988 GDF11O95390 407 aa26.17■■□□□ 1.78
OTUB1-212ENST00000543988 FAM43AQ8N2R8 423 aa26.17■■□□□ 1.78
OTUB1-212ENST00000543988 CFHR5Q9BXR6 569 aa26.17■■□□□ 1.78
OTUB1-212ENST00000543988 AFG3L2Q9Y4W6 797 aa26.17■■□□□ 1.78
OTUB1-212ENST00000543988 CYP2D7A0A087X1C5 515 aa26.16■■□□□ 1.78
OTUB1-212ENST00000543988 TRIM6-TRIM34B2RNG4 842 aa26.16■■□□□ 1.78
OTUB1-212ENST00000543988 CXCL11O14625 94 aa26.16■■□□□ 1.78
OTUB1-212ENST00000543988 SHMT1P34896 483 aa26.16■■□□□ 1.78
OTUB1-212ENST00000543988 GABPAQ06546 454 aa26.16■■□□□ 1.78
OTUB1-212ENST00000543988 MOGSQ13724 837 aa26.16■■□□□ 1.78
OTUB1-212ENST00000543988 OTUD7BQ6GQQ9 843 aa26.16■■□□□ 1.78
OTUB1-212ENST00000543988 DDRGK1Q96HY6 314 aa26.16■■□□□ 1.78
OTUB1-212ENST00000543988 ZBTB21Q9ULJ3 1066 aa26.16■■□□□ 1.78
OTUB1-212ENST00000543988 TRIM75PA6NK02 468 aa26.15■■□□□ 1.78
OTUB1-212ENST00000543988 GSG1L2A8MUP6 293 aa26.15■■□□□ 1.78
OTUB1-212ENST00000543988 BTBD19C9JJ37 291 aa26.15■■□□□ 1.78
OTUB1-212ENST00000543988 USP17L12C9JPN9 530 aa26.15■■□□□ 1.78
OTUB1-212ENST00000543988 USP17L21D6R901 530 aa26.15■■□□□ 1.78
OTUB1-212ENST00000543988 SMIM22K7EJ46 135 aa26.15■■□□□ 1.78
OTUB1-212ENST00000543988 TATDN1Q6P1N9 297 aa26.15■■□□□ 1.78
OTUB1-212ENST00000543988 EPB41L4AQ9HCS5 686 aaPredicted RBP26.15■■□□□ 1.78
OTUB1-212ENST00000543988 ASNSP08243 561 aa26.14■■□□□ 1.78
OTUB1-212ENST00000543988 CRHR2Q13324 411 aa26.14■■□□□ 1.78
OTUB1-212ENST00000543988 SLC44A5Q8NCS7 719 aa26.14■■□□□ 1.78
OTUB1-212ENST00000543988 RILPL2Q969X0 211 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms