RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	ZNF287	Q9HBT7	754 aa		12.07	□□□□□ -0.48
CPSF7-221	ENST00000543545	SCN4A	P35499	1836 aa		12.07	□□□□□ -0.48
CPSF7-221	ENST00000543545	ATRNL1	Q5VV63	1379 aa		12.06	□□□□□ -0.48
CPSF7-221	ENST00000543545	MYH2	Q9UKX2	1941 aa		12.06	□□□□□ -0.48
CPSF7-221	ENST00000543545	SMIM22	K7EJ46	135 aa		12.06	□□□□□ -0.48
CPSF7-221	ENST00000543545	SEC24B	O95487	1268 aa		12.06	□□□□□ -0.48
CPSF7-221	ENST00000543545	SLURP2	P0DP57	97 aa		12.06	□□□□□ -0.48
CPSF7-221	ENST00000543545	IREB2	P48200	963 aa	Known RBP	12.06	□□□□□ -0.48
CPSF7-221	ENST00000543545	EVX2	Q03828	476 aa		12.06	□□□□□ -0.48
CPSF7-221	ENST00000543545	PDE4B	Q07343	736 aa		12.06	□□□□□ -0.48
CPSF7-221	ENST00000543545	CREB3L3	Q68CJ9	461 aa		12.06	□□□□□ -0.48
CPSF7-221	ENST00000543545	C2orf69	Q8N8R5	385 aa		12.06	□□□□□ -0.48
CPSF7-221	ENST00000543545	EHD4	Q9H223	541 aa		12.06	□□□□□ -0.48
CPSF7-221	ENST00000543545	UPF2	Q9HAU5	1272 aa	Known RBP	12.06	□□□□□ -0.48
CPSF7-221	ENST00000543545	SWAP70	Q9UH65	585 aa		12.06	□□□□□ -0.48
CPSF7-221	ENST00000543545	HERC5	Q9UII4	1024 aa	Known RBP	12.06	□□□□□ -0.48
CPSF7-221	ENST00000543545	ANGEL1	Q9UNK9	670 aa	Known RBP	12.06	□□□□□ -0.48
CPSF7-221	ENST00000543545	FZD1	Q9UP38	647 aa		12.06	□□□□□ -0.48
CPSF7-221	ENST00000543545	ZNF646	O15015	1829 aa	Predicted RBP	12.05	□□□□□ -0.48
CPSF7-221	ENST00000543545	SLC27A2	O14975	620 aa		12.05	□□□□□ -0.48
CPSF7-221	ENST00000543545	TBC1D12	O60347	775 aa		12.05	□□□□□ -0.48
CPSF7-221	ENST00000543545	USP2	O75604	605 aa	Predicted RBP	12.05	□□□□□ -0.48
CPSF7-221	ENST00000543545	PRDM1	O75626	825 aa		12.05	□□□□□ -0.48
CPSF7-221	ENST00000543545	ZKSCAN1	P17029	563 aa	Predicted RBP	12.05	□□□□□ -0.48
CPSF7-221	ENST00000543545	CDK8	P49336	464 aa		12.05	□□□□□ -0.48
CPSF7-221	ENST00000543545	RRP12	Q5JTH9	1297 aa	Known RBP	12.05	□□□□□ -0.48
CPSF7-221	ENST00000543545	MFSD6	Q6ZSS7	791 aa		12.05	□□□□□ -0.48
CPSF7-221	ENST00000543545	ZNF444	Q8N0Y2	327 aa	Predicted RBP	12.05	□□□□□ -0.48
CPSF7-221	ENST00000543545	SLC44A5	Q8NCS7	719 aa		12.05	□□□□□ -0.48
CPSF7-221	ENST00000543545	USP26	Q9BXU7	913 aa		12.05	□□□□□ -0.48
CPSF7-221	ENST00000543545	RNF41	Q9H4P4	317 aa	Predicted RBP	12.05	□□□□□ -0.48
CPSF7-221	ENST00000543545	GBA2	Q9HCG7	927 aa	Predicted RBP	12.05	□□□□□ -0.48
CPSF7-221	ENST00000543545	ZMYM6	O95789	1325 aa		12.05	□□□□□ -0.48
CPSF7-221	ENST00000543545	MAST2	Q6P0Q8	1798 aa		12.05	□□□□□ -0.48
CPSF7-221	ENST00000543545	DOCK2	Q92608	1830 aa		12.04	□□□□□ -0.48
CPSF7-221	ENST00000543545	UBE2Q2L	H0YL09	131 aa		12.04	□□□□□ -0.48
CPSF7-221	ENST00000543545	MPHOSPH10	O00566	681 aa	Known RBP	12.04	□□□□□ -0.48
CPSF7-221	ENST00000543545	CYP21A2	P08686	494 aa		12.04	□□□□□ -0.48
CPSF7-221	ENST00000543545	MAP3K9	P80192	1104 aa		12.04	□□□□□ -0.48
CPSF7-221	ENST00000543545	TRDN	Q13061	729 aa		12.04	□□□□□ -0.48
CPSF7-221	ENST00000543545	CERKL	Q49MI3	558 aa	Predicted RBP	12.04	□□□□□ -0.48
CPSF7-221	ENST00000543545	AKNAD1	Q5T1N1	836 aa		12.04	□□□□□ -0.48
CPSF7-221	ENST00000543545	C16orf86	Q6ZW13	317 aa		12.04	□□□□□ -0.48
CPSF7-221	ENST00000543545	MOB2	Q70IA6	237 aa		12.04	□□□□□ -0.48
CPSF7-221	ENST00000543545	WRNIP1	Q96S55	665 aa		12.04	□□□□□ -0.48
CPSF7-221	ENST00000543545	INCENP	Q9NQS7	918 aa		12.04	□□□□□ -0.48
CPSF7-221	ENST00000543545	ANAPC4	Q9UJX5	808 aa		12.04	□□□□□ -0.48
CPSF7-221	ENST00000543545	ADAMTSL1	Q8N6G6	1762 aa		12.04	□□□□□ -0.48
CPSF7-221	ENST00000543545	MYO5A	Q9Y4I1	1855 aa	Known RBP	12.04	□□□□□ -0.48
CPSF7-221	ENST00000543545	EPB41L2	O43491	1005 aa	Known RBP	12.03	□□□□□ -0.48
CPSF7-221	ENST00000543545	RANBP6	O60518	1105 aa	Known RBP	12.03	□□□□□ -0.48
CPSF7-221	ENST00000543545	GDF11	O95390	407 aa		12.03	□□□□□ -0.48
CPSF7-221	ENST00000543545	FKBP1B	P68106	108 aa		12.03	□□□□□ -0.48
CPSF7-221	ENST00000543545	GABPA	Q06546	454 aa		12.03	□□□□□ -0.48
CPSF7-221	ENST00000543545	NECTIN1	Q15223	517 aa		12.03	□□□□□ -0.48
CPSF7-221	ENST00000543545	CST9	Q5W186	159 aa		12.03	□□□□□ -0.48
CPSF7-221	ENST00000543545	RALYL	Q86SE5	291 aa	Known RBP	12.03	□□□□□ -0.48
CPSF7-221	ENST00000543545	TBC1D10C	Q8IV04	446 aa		12.03	□□□□□ -0.48
CPSF7-221	ENST00000543545	STAG1	Q8WVM7	1258 aa		12.03	□□□□□ -0.48
CPSF7-221	ENST00000543545	BACH2	Q9BYV9	841 aa		12.03	□□□□□ -0.48
CPSF7-221	ENST00000543545	CABP5	Q9NP86	173 aa		12.03	□□□□□ -0.48
CPSF7-221	ENST00000543545	TAOK2	Q9UL54	1235 aa		12.03	□□□□□ -0.48
CPSF7-221	ENST00000543545	ABT1	Q9ULW3	272 aa	Known RBP	12.03	□□□□□ -0.48
CPSF7-221	ENST00000543545	CSAD	Q9Y600	493 aa		12.03	□□□□□ -0.48
CPSF7-221	ENST00000543545	COL2A1	P02458	1487 aa	Predicted RBP	12.02	□□□□□ -0.48
CPSF7-221	ENST00000543545	TMEM88B	A6NKF7	163 aa		12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	TSPY3	P0CV98	308 aa		12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	TSPY8	P0CW00	308 aa		12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	PC	P11498	1178 aa	Known RBP	12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	INPP5B	P32019	993 aa		12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	SHMT1	P34896	483 aa		12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	HSPA4	P34932	840 aa		12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	MAP3K10	Q02779	954 aa		12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	ABCB5	Q2M3G0	1257 aa		12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	METTL16	Q86W50	562 aa	Known RBP	12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	ZKSCAN4	Q969J2	545 aa	Predicted RBP	12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	KLRG1	Q96E93	195 aa		12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	CCDC17	Q96LX7	622 aa		12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	KRT23	Q9C075	422 aa		12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	DNAJC18	Q9H819	358 aa		12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	CNNM2	Q9H8M5	875 aa		12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	PICK1	Q9NRD5	415 aa		12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	PASK	Q96RG2	1323 aa		12.02	□□□□□ -0.49
CPSF7-221	ENST00000543545	TSPY2	A6NKD2	308 aa		12.01	□□□□□ -0.49
CPSF7-221	ENST00000543545	PHF20L1	A8MW92	1017 aa		12.01	□□□□□ -0.49
CPSF7-221	ENST00000543545		E7EWF7	191 aa		12.01	□□□□□ -0.49
CPSF7-221	ENST00000543545	ORC4	O43929	436 aa		12.01	□□□□□ -0.49
CPSF7-221	ENST00000543545	CTNND1	O60716	968 aa	Known RBP	12.01	□□□□□ -0.49
CPSF7-221	ENST00000543545	CAP2	P40123	477 aa		12.01	□□□□□ -0.49
CPSF7-221	ENST00000543545	HUNK	P57058	714 aa		12.01	□□□□□ -0.49
CPSF7-221	ENST00000543545	TFAP4	Q01664	338 aa		12.01	□□□□□ -0.49
CPSF7-221	ENST00000543545	KRT32	Q14532	448 aa		12.01	□□□□□ -0.49
CPSF7-221	ENST00000543545	FAM47A	Q5JRC9	791 aa		12.01	□□□□□ -0.49
CPSF7-221	ENST00000543545	TATDN1	Q6P1N9	297 aa		12.01	□□□□□ -0.49
CPSF7-221	ENST00000543545	ANKRD13A	Q8IZ07	590 aa		12.01	□□□□□ -0.49
CPSF7-221	ENST00000543545	RASEF	Q8IZ41	740 aa		12.01	□□□□□ -0.49
CPSF7-221	ENST00000543545	NCOA7	Q8NI08	942 aa		12.01	□□□□□ -0.49
CPSF7-221	ENST00000543545	ESR2	Q92731	530 aa		12.01	□□□□□ -0.49
CPSF7-221	ENST00000543545	SLC10A4	Q96EP9	437 aa		12.01	□□□□□ -0.49
CPSF7-221	ENST00000543545	C22orf23	Q9BZE7	217 aa		12.01	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms