RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 LAMB1P07942 1786 aa7.54□□□□□ -1.2
LTBR-212ENST00000543542 RAD50Q92878 1312 aa7.53□□□□□ -1.2
LTBR-212ENST00000543542 GSG1L2A8MUP6 293 aa7.53□□□□□ -1.2
LTBR-212ENST00000543542 USP17L12C9JPN9 530 aa7.53□□□□□ -1.2
LTBR-212ENST00000543542 USP17L21D6R901 530 aa7.53□□□□□ -1.2
LTBR-212ENST00000543542 MPHOSPH10O00566 681 aaKnown RBP7.53□□□□□ -1.2
LTBR-212ENST00000543542 USP2O75604 605 aaPredicted RBP7.53□□□□□ -1.2
LTBR-212ENST00000543542 CYP2D6P10635 497 aa7.53□□□□□ -1.2
LTBR-212ENST00000543542 MAP3K9P80192 1104 aa7.53□□□□□ -1.2
LTBR-212ENST00000543542 HTRA3P83110 453 aa7.53□□□□□ -1.2
LTBR-212ENST00000543542 GIMAP6Q6P9H5 292 aa7.53□□□□□ -1.2
LTBR-212ENST00000543542 CTR9Q6PD62 1173 aa7.53□□□□□ -1.2
LTBR-212ENST00000543542 ZNF589Q86UQ0 364 aaPredicted RBP7.53□□□□□ -1.2
LTBR-212ENST00000543542 ANKRD13AQ8IZ07 590 aa7.53□□□□□ -1.2
LTBR-212ENST00000543542 SLC10A4Q96EP9 437 aa7.53□□□□□ -1.2
LTBR-212ENST00000543542 ELP3Q9H9T3 547 aa7.53□□□□□ -1.2
LTBR-212ENST00000543542 MKNK2Q9HBH9 465 aa7.53□□□□□ -1.2
LTBR-212ENST00000543542 TOMM22Q9NS69 142 aa7.53□□□□□ -1.2
LTBR-212ENST00000543542 MKRN1Q9UHC7 482 aaKnown RBP7.53□□□□□ -1.2
LTBR-212ENST00000543542 TLL2Q9Y6L7 1015 aa7.53□□□□□ -1.2
LTBR-212ENST00000543542 ATRNL1Q5VV63 1379 aa7.53□□□□□ -1.2
LTBR-212ENST00000543542 SSC5DA1L4H1 1573 aa7.53□□□□□ -1.2
LTBR-212ENST00000543542 CYP2D7A0A087X1C5 515 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 SLURP2P0DP57 97 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 HSPD1P10809 573 aaKnown RBP7.52□□□□□ -1.21
LTBR-212ENST00000543542 ECE1P42892 770 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 PLCD1P51178 756 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 MKRN3Q13064 507 aaKnown RBP7.52□□□□□ -1.21
LTBR-212ENST00000543542 C12orf60Q5U649 245 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 VPS53Q5VIR6 699 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 CYP4F22Q6NT55 531 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 RGMBQ6NW40 437 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 SAPCD2Q86UD0 394 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 ZKSCAN4Q969J2 545 aaPredicted RBP7.52□□□□□ -1.21
LTBR-212ENST00000543542 KLRG1Q96E93 195 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 DYNLL2Q96FJ2 89 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 ESYT1Q9BSJ8 1104 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 ZNF287Q9HBT7 754 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 EPB41L4AQ9HCS5 686 aaPredicted RBP7.52□□□□□ -1.21
LTBR-212ENST00000543542 CABP5Q9NP86 173 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 ANO2Q9NQ90 1003 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 PICK1Q9NRD5 415 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 CTNNA3Q9UI47 895 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 ATAD5Q96QE3 1844 aa7.52□□□□□ -1.21
LTBR-212ENST00000543542 DDX60LQ5H9U9 1706 aaKnown RBP7.52□□□□□ -1.21
LTBR-212ENST00000543542 OTOFQ9HC10 1997 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 SIPA1L1O43166 1804 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 ZNF213O14771 459 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 SGSM2O43147 1006 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 TBC1D12O60347 775 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 GDF11O95390 407 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 INPP5BP32019 993 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 HAND2P61296 217 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 CTDSPL2Q05D32 466 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 PDE4BQ07343 736 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 PPARAQ07869 468 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 MAP3K11Q16584 847 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 IMMTQ16891 758 aaKnown RBP7.51□□□□□ -1.21
LTBR-212ENST00000543542 CERKLQ49MI3 558 aaPredicted RBP7.51□□□□□ -1.21
LTBR-212ENST00000543542 SBK1Q52WX2 424 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 RRP12Q5JTH9 1297 aaKnown RBP7.51□□□□□ -1.21
LTBR-212ENST00000543542 SCYL3Q8IZE3 742 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 ZNF444Q8N0Y2 327 aaPredicted RBP7.51□□□□□ -1.21
LTBR-212ENST00000543542 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.51□□□□□ -1.21
LTBR-212ENST00000543542 CCDC102AQ96A19 550 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 CLMNQ96JQ2 1002 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 CAPNS2Q96L46 248 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 DSCC1Q9BVC3 393 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 EHD4Q9H223 541 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 SWAP70Q9UH65 585 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 DOCK1Q14185 1865 aa7.51□□□□□ -1.21
LTBR-212ENST00000543542 UNCXA6NJT0 531 aa7.5□□□□□ -1.21
LTBR-212ENST00000543542 RASSF10A6NK89 507 aa7.5□□□□□ -1.21
LTBR-212ENST00000543542 CTNND1O60716 968 aaKnown RBP7.5□□□□□ -1.21
LTBR-212ENST00000543542 FGAP02671 866 aa7.5□□□□□ -1.21
LTBR-212ENST00000543542 CDK8P49336 464 aa7.5□□□□□ -1.21
LTBR-212ENST00000543542 EVX2Q03828 476 aa7.5□□□□□ -1.21
LTBR-212ENST00000543542 VGLL4Q14135 290 aa7.5□□□□□ -1.21
LTBR-212ENST00000543542 RAB3GAP1Q15042 981 aa7.5□□□□□ -1.21
LTBR-212ENST00000543542 ALX1Q15699 326 aa7.5□□□□□ -1.21
LTBR-212ENST00000543542 ABCB5Q2M3G0 1257 aa7.5□□□□□ -1.21
LTBR-212ENST00000543542 LDLRAD1Q5T700 205 aa7.5□□□□□ -1.21
LTBR-212ENST00000543542 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.5□□□□□ -1.21
LTBR-212ENST00000543542 OPTNQ96CV9 577 aa7.5□□□□□ -1.21
LTBR-212ENST00000543542 OTUD5Q96G74 571 aa7.5□□□□□ -1.21
LTBR-212ENST00000543542 HHIPL1Q96JK4 782 aa7.5□□□□□ -1.21
LTBR-212ENST00000543542 AS3MTQ9HBK9 375 aa7.5□□□□□ -1.21
LTBR-212ENST00000543542 U3KPZ7 1027 aaPredicted RBP7.5□□□□□ -1.21
LTBR-212ENST00000543542 WDR33Q9C0J8 1336 aaKnown RBP7.5□□□□□ -1.21
LTBR-212ENST00000543542 TSPY2A6NKD2 308 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 PHF20L1A8MW92 1017 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 RANBP6O60518 1105 aaKnown RBP7.49□□□□□ -1.21
LTBR-212ENST00000543542 EIF5BO60841 1220 aaKnown RBP7.49□□□□□ -1.21
LTBR-212ENST00000543542 PRDM1O75626 825 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 REC8O95072 547 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 GH2P01242 217 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 ASNSP08243 561 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 TSPY3P0CV98 308 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 TSPY8P0CW00 308 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 SHMT1P34896 483 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms