RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 ORC4O43929 436 aa12.61□□□□□ -0.39
DDB1-221ENST00000543162 MCM5P33992 734 aa12.61□□□□□ -0.39
DDB1-221ENST00000543162 TNNI2P48788 182 aa12.61□□□□□ -0.39
DDB1-221ENST00000543162 COL9A3Q14050 684 aaPredicted RBP12.61□□□□□ -0.39
DDB1-221ENST00000543162 MB21D2Q8IYB1 491 aaPredicted RBP12.61□□□□□ -0.39
DDB1-221ENST00000543162 TRPM4Q8TD43 1214 aa12.61□□□□□ -0.39
DDB1-221ENST00000543162 FAM151AQ8WW52 585 aa12.61□□□□□ -0.39
DDB1-221ENST00000543162 ESR2Q92731 530 aa12.61□□□□□ -0.39
DDB1-221ENST00000543162 DYNLL2Q96FJ2 89 aa12.61□□□□□ -0.39
DDB1-221ENST00000543162 L3MBTL3Q96JM7 780 aaPredicted RBP12.61□□□□□ -0.39
DDB1-221ENST00000543162 TCEANC2Q96MN5 208 aa12.61□□□□□ -0.39
DDB1-221ENST00000543162 TTC14Q96N46 770 aa12.61□□□□□ -0.39
DDB1-221ENST00000543162 ADARB2Q9NS39 739 aaKnown RBP12.61□□□□□ -0.39
DDB1-221ENST00000543162 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.61□□□□□ -0.39
DDB1-221ENST00000543162 TACC3Q9Y6A5 838 aa12.61□□□□□ -0.39
DDB1-221ENST00000543162 COL2A1P02458 1487 aaPredicted RBP12.6□□□□□ -0.39
DDB1-221ENST00000543162 CNTNAP1P78357 1384 aa12.6□□□□□ -0.39
DDB1-221ENST00000543162 ATRNL1Q5VV63 1379 aa12.6□□□□□ -0.39
DDB1-221ENST00000543162 DDTLA6NHG4 134 aaPredicted RBP12.6□□□□□ -0.39
DDB1-221ENST00000543162 PRC1O43663 620 aa12.6□□□□□ -0.39
DDB1-221ENST00000543162 RANBP6O60518 1105 aaKnown RBP12.6□□□□□ -0.39
DDB1-221ENST00000543162 KDM4AO75164 1064 aa12.6□□□□□ -0.39
DDB1-221ENST00000543162 PRDM1O75626 825 aa12.6□□□□□ -0.39
DDB1-221ENST00000543162 CD2BP2O95400 341 aaKnown RBP12.6□□□□□ -0.39
DDB1-221ENST00000543162 FGRP09769 529 aa12.6□□□□□ -0.39
DDB1-221ENST00000543162 MCM2P49736 904 aa12.6□□□□□ -0.39
DDB1-221ENST00000543162 FGD1P98174 961 aa12.6□□□□□ -0.39
DDB1-221ENST00000543162 EXOSC10Q01780 885 aaKnown RBP12.6□□□□□ -0.39
DDB1-221ENST00000543162 TNFAIP1Q13829 316 aa12.6□□□□□ -0.39
DDB1-221ENST00000543162 C16orf86Q6ZW13 317 aa12.6□□□□□ -0.39
DDB1-221ENST00000543162 FAM83AQ86UY5 434 aa12.6□□□□□ -0.39
DDB1-221ENST00000543162 TBC1D2Q9BYX2 928 aa12.6□□□□□ -0.39
DDB1-221ENST00000543162 MKNK2Q9HBH9 465 aa12.6□□□□□ -0.39
DDB1-221ENST00000543162 PI4KBQ9UBF8 816 aa12.6□□□□□ -0.39
DDB1-221ENST00000543162 DAXXQ9UER7 740 aaPredicted RBP12.6□□□□□ -0.39
DDB1-221ENST00000543162 SERPINB13Q9UIV8 391 aa12.6□□□□□ -0.39
DDB1-221ENST00000543162 HACL1Q9UJ83 578 aa12.6□□□□□ -0.39
DDB1-221ENST00000543162 WDR19Q8NEZ3 1342 aa12.6□□□□□ -0.39
DDB1-221ENST00000543162 CDK8P49336 464 aa12.59□□□□□ -0.39
DDB1-221ENST00000543162 NT5C2P49902 561 aa12.59□□□□□ -0.39
DDB1-221ENST00000543162 AK2P54819 239 aa12.59□□□□□ -0.39
DDB1-221ENST00000543162 ANKRD1Q15327 319 aa12.59□□□□□ -0.39
DDB1-221ENST00000543162 Q6ZUG5 572 aa12.59□□□□□ -0.39
DDB1-221ENST00000543162 NOL8Q76FK4 1167 aaKnown RBP12.59□□□□□ -0.39
DDB1-221ENST00000543162 CYB5R4Q7L1T6 521 aa12.59□□□□□ -0.39
DDB1-221ENST00000543162 SH3BP5LQ7L8J4 393 aa12.59□□□□□ -0.39
DDB1-221ENST00000543162 CHST3Q7LGC8 479 aa12.59□□□□□ -0.39
DDB1-221ENST00000543162 CRACR2BQ8N4Y2 399 aaPredicted RBP12.59□□□□□ -0.39
DDB1-221ENST00000543162 SLC44A5Q8NCS7 719 aa12.59□□□□□ -0.39
DDB1-221ENST00000543162 IPO9Q96P70 1041 aaKnown RBP12.59□□□□□ -0.39
DDB1-221ENST00000543162 TRIM34Q9BYJ4 488 aa12.59□□□□□ -0.39
DDB1-221ENST00000543162 EHD4Q9H223 541 aa12.59□□□□□ -0.39
DDB1-221ENST00000543162 ALDH8A1Q9H2A2 487 aaPredicted RBP12.59□□□□□ -0.39
DDB1-221ENST00000543162 ZSWIM5Q9P217 1185 aa12.59□□□□□ -0.39
DDB1-221ENST00000543162 ASTN2O75129 1339 aaPredicted RBP12.59□□□□□ -0.39
DDB1-221ENST00000543162 IQCA1LA6NCM1 817 aa12.58□□□□□ -0.4
DDB1-221ENST00000543162 K7ELQ4 463 aaPredicted RBP12.58□□□□□ -0.4
DDB1-221ENST00000543162 HIRAP54198 1017 aaPredicted RBP12.58□□□□□ -0.4
DDB1-221ENST00000543162 ANTXR2P58335 489 aa12.58□□□□□ -0.4
DDB1-221ENST00000543162 GABPAQ06546 454 aa12.58□□□□□ -0.4
DDB1-221ENST00000543162 RASA3Q14644 834 aa12.58□□□□□ -0.4
DDB1-221ENST00000543162 ANGEL2Q5VTE6 544 aaKnown RBP12.58□□□□□ -0.4
DDB1-221ENST00000543162 APOBEC3FQ8IUX4 373 aaKnown RBP12.58□□□□□ -0.4
DDB1-221ENST00000543162 FOXP4Q8IVH2 680 aaPredicted RBP12.58□□□□□ -0.4
DDB1-221ENST00000543162 ZNF444Q8N0Y2 327 aaPredicted RBP12.58□□□□□ -0.4
DDB1-221ENST00000543162 TMEM87BQ96K49 555 aa12.58□□□□□ -0.4
DDB1-221ENST00000543162 CSRNP1Q96S65 589 aa12.58□□□□□ -0.4
DDB1-221ENST00000543162 LRRC2Q9BYS8 371 aa12.58□□□□□ -0.4
DDB1-221ENST00000543162 TMEM39BQ9GZU3 492 aa12.58□□□□□ -0.4
DDB1-221ENST00000543162 SWAP70Q9UH65 585 aa12.58□□□□□ -0.4
DDB1-221ENST00000543162 TAOK2Q9UL54 1235 aa12.58□□□□□ -0.4
DDB1-221ENST00000543162 TSPY2A6NKD2 308 aa12.57□□□□□ -0.4
DDB1-221ENST00000543162 RASA1P20936 1047 aa12.57□□□□□ -0.4
DDB1-221ENST00000543162 EPHX2P34913 555 aa12.57□□□□□ -0.4
DDB1-221ENST00000543162 TOB2Q14106 344 aaPredicted RBP12.57□□□□□ -0.4
DDB1-221ENST00000543162 SART3Q15020 963 aaKnown RBP12.57□□□□□ -0.4
DDB1-221ENST00000543162 USP50Q70EL3 339 aaPredicted RBP12.57□□□□□ -0.4
DDB1-221ENST00000543162 IQCA1Q86XH1 822 aa12.57□□□□□ -0.4
DDB1-221ENST00000543162 NKX2-3Q8TAU0 364 aa12.57□□□□□ -0.4
DDB1-221ENST00000543162 BRF1Q92994 677 aa12.57□□□□□ -0.4
DDB1-221ENST00000543162 UBAC1Q9BSL1 405 aa12.57□□□□□ -0.4
DDB1-221ENST00000543162 GGA3Q9NZ52 723 aa12.57□□□□□ -0.4
DDB1-221ENST00000543162 LIMCH1Q9UPQ0 1083 aa12.57□□□□□ -0.4
DDB1-221ENST00000543162 SCN4AP35499 1836 aa12.56□□□□□ -0.4
DDB1-221ENST00000543162 ERICH2A1L162 156 aa12.56□□□□□ -0.4
DDB1-221ENST00000543162 IFIT3O14879 490 aaKnown RBP12.56□□□□□ -0.4
DDB1-221ENST00000543162 TSPY3P0CV98 308 aa12.56□□□□□ -0.4
DDB1-221ENST00000543162 TSPY8P0CW00 308 aa12.56□□□□□ -0.4
DDB1-221ENST00000543162 TFAP4Q01664 338 aa12.56□□□□□ -0.4
DDB1-221ENST00000543162 TMEM67Q5HYA8 995 aa12.56□□□□□ -0.4
DDB1-221ENST00000543162 FAM47AQ5JRC9 791 aa12.56□□□□□ -0.4
DDB1-221ENST00000543162 FBXL16Q8N461 479 aa12.56□□□□□ -0.4
DDB1-221ENST00000543162 ZKSCAN3Q9BRR0 538 aa12.56□□□□□ -0.4
DDB1-221ENST00000543162 LARP6Q9BRS8 491 aaKnown RBP12.56□□□□□ -0.4
DDB1-221ENST00000543162 MTA3Q9BTC8 594 aa12.56□□□□□ -0.4
DDB1-221ENST00000543162 AGXT2Q9BYV1 514 aa12.56□□□□□ -0.4
DDB1-221ENST00000543162 DEFB129Q9H1M3 183 aa12.56□□□□□ -0.4
DDB1-221ENST00000543162 HERC5Q9UII4 1024 aaKnown RBP12.56□□□□□ -0.4
DDB1-221ENST00000543162 ANGEL1Q9UNK9 670 aaKnown RBP12.56□□□□□ -0.4
DDB1-221ENST00000543162 SCAF8Q9UPN6 1271 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms