RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 DOCK2Q92608 1830 aa11.8□□□□□ -0.52
C2CD3-219ENST00000542930 DOCK1Q14185 1865 aa11.8□□□□□ -0.52
C2CD3-219ENST00000542930 TMEM265A0A087WTH1 108 aa11.79□□□□□ -0.52
C2CD3-219ENST00000542930 DDTLA6NHG4 134 aaPredicted RBP11.79□□□□□ -0.52
C2CD3-219ENST00000542930 SLURP2P0DP57 97 aa11.79□□□□□ -0.52
C2CD3-219ENST00000542930 CCND3P30281 292 aaPredicted RBP11.79□□□□□ -0.52
C2CD3-219ENST00000542930 SPP2Q13103 211 aa11.79□□□□□ -0.52
C2CD3-219ENST00000542930 RABL6Q3YEC7 729 aaPredicted RBP11.79□□□□□ -0.52
C2CD3-219ENST00000542930 ZNF280CQ8ND82 737 aa11.79□□□□□ -0.52
C2CD3-219ENST00000542930 TBC1D2Q9BYX2 928 aa11.79□□□□□ -0.52
C2CD3-219ENST00000542930 RFX7Q2KHR2 1363 aa11.79□□□□□ -0.52
C2CD3-219ENST00000542930 TBC1D12O60347 775 aa11.78□□□□□ -0.52
C2CD3-219ENST00000542930 VAMP4O75379 141 aa11.78□□□□□ -0.52
C2CD3-219ENST00000542930 HMGCS2P54868 508 aa11.78□□□□□ -0.52
C2CD3-219ENST00000542930 PDE3AQ14432 1141 aa11.78□□□□□ -0.52
C2CD3-219ENST00000542930 CCDC27Q2M243 656 aa11.78□□□□□ -0.52
C2CD3-219ENST00000542930 SH3D19Q5HYK7 790 aa11.78□□□□□ -0.52
C2CD3-219ENST00000542930 C9orf50Q5SZB4 431 aa11.78□□□□□ -0.52
C2CD3-219ENST00000542930 USP6NLQ92738 828 aa11.78□□□□□ -0.52
C2CD3-219ENST00000542930 SRCIN1Q9C0H9 1055 aa11.78□□□□□ -0.52
C2CD3-219ENST00000542930 OSBPL5Q9H0X9 879 aaPredicted RBP11.78□□□□□ -0.52
C2CD3-219ENST00000542930 BICC1Q9H694 974 aaKnown RBP11.78□□□□□ -0.52
C2CD3-219ENST00000542930 IL16Q14005 1332 aa11.78□□□□□ -0.52
C2CD3-219ENST00000542930 LOC285556D6RIA3 1793 aa11.77□□□□□ -0.52
C2CD3-219ENST00000542930 MAST2Q6P0Q8 1798 aa11.77□□□□□ -0.52
C2CD3-219ENST00000542930 NBPF7P0C2Y1 421 aaPredicted RBP11.77□□□□□ -0.53
C2CD3-219ENST00000542930 SLC5A1P13866 664 aa11.77□□□□□ -0.53
C2CD3-219ENST00000542930 MAPK4P31152 587 aa11.77□□□□□ -0.53
C2CD3-219ENST00000542930 HOXD11P31277 338 aaPredicted RBP11.77□□□□□ -0.53
C2CD3-219ENST00000542930 RGS2P41220 211 aa11.77□□□□□ -0.53
C2CD3-219ENST00000542930 ATN1P54259 1190 aaPredicted RBP11.77□□□□□ -0.53
C2CD3-219ENST00000542930 CCL14Q16627 93 aa11.77□□□□□ -0.53
C2CD3-219ENST00000542930 WWC1Q8IX03 1113 aa11.77□□□□□ -0.53
C2CD3-219ENST00000542930 GPRC5AQ8NFJ5 357 aa11.77□□□□□ -0.53
C2CD3-219ENST00000542930 LPIN2Q92539 896 aa11.77□□□□□ -0.53
C2CD3-219ENST00000542930 BDP1A6H8Y1 2624 aa11.77□□□□□ -0.53
C2CD3-219ENST00000542930 UTYO14607 1347 aa11.77□□□□□ -0.53
C2CD3-219ENST00000542930 SALL1Q9NSC2 1324 aa11.77□□□□□ -0.53
C2CD3-219ENST00000542930 RTP1P59025 263 aa11.76□□□□□ -0.53
C2CD3-219ENST00000542930 IRX3P78415 501 aaPredicted RBP11.76□□□□□ -0.53
C2CD3-219ENST00000542930 MORN1Q5T089 497 aa11.76□□□□□ -0.53
C2CD3-219ENST00000542930 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.76□□□□□ -0.53
C2CD3-219ENST00000542930 DDX4Q9NQI0 724 aaKnown RBP11.76□□□□□ -0.53
C2CD3-219ENST00000542930 GAKO14976 1311 aa11.76□□□□□ -0.53
C2CD3-219ENST00000542930 LTBP2Q14767 1821 aa11.76□□□□□ -0.53
C2CD3-219ENST00000542930 USP17L5A8MUK1 530 aa11.75□□□□□ -0.53
C2CD3-219ENST00000542930 DNM1LO00429 736 aa11.75□□□□□ -0.53
C2CD3-219ENST00000542930 MSCO60682 206 aa11.75□□□□□ -0.53
C2CD3-219ENST00000542930 HOXA7P31268 230 aaPredicted RBP11.75□□□□□ -0.53
C2CD3-219ENST00000542930 HERVK_113P62684 666 aa11.75□□□□□ -0.53
C2CD3-219ENST00000542930 PICALMQ13492 652 aa11.75□□□□□ -0.53
C2CD3-219ENST00000542930 SLC4A10Q6U841 1118 aa11.75□□□□□ -0.53
C2CD3-219ENST00000542930 GPR142Q7Z601 462 aa11.75□□□□□ -0.53
C2CD3-219ENST00000542930 CCAR1Q8IX12 1150 aaKnown RBP11.75□□□□□ -0.53
C2CD3-219ENST00000542930 ANKRD44Q8N8A2 993 aa11.75□□□□□ -0.53
C2CD3-219ENST00000542930 USP38Q8NB14 1042 aa11.75□□□□□ -0.53
C2CD3-219ENST00000542930 KLHDC4Q8TBB5 520 aa11.75□□□□□ -0.53
C2CD3-219ENST00000542930 LPAR1Q92633 364 aa11.75□□□□□ -0.53
C2CD3-219ENST00000542930 FAM163AQ96GL9 167 aaPredicted RBP11.75□□□□□ -0.53
C2CD3-219ENST00000542930 P2RX7Q99572 595 aaKnown RBP11.75□□□□□ -0.53
C2CD3-219ENST00000542930 APBA2Q99767 749 aa11.75□□□□□ -0.53
C2CD3-219ENST00000542930 TXNRD2Q9NNW7 524 aa11.75□□□□□ -0.53
C2CD3-219ENST00000542930 GNL3LQ9NVN8 582 aaKnown RBP11.75□□□□□ -0.53
C2CD3-219ENST00000542930 MYH13Q9UKX3 1938 aa11.75□□□□□ -0.53
C2CD3-219ENST00000542930 SEMA3EO15041 775 aa11.74□□□□□ -0.53
C2CD3-219ENST00000542930 PEX10O60683 326 aa11.74□□□□□ -0.53
C2CD3-219ENST00000542930 CAP2P40123 477 aa11.74□□□□□ -0.53
C2CD3-219ENST00000542930 MAP3K12Q12852 859 aa11.74□□□□□ -0.53
C2CD3-219ENST00000542930 SLF2Q8IX21 1173 aa11.74□□□□□ -0.53
C2CD3-219ENST00000542930 ZGPATQ8N5A5 531 aaKnown RBP11.74□□□□□ -0.53
C2CD3-219ENST00000542930 ATXN2LQ8WWM7 1075 aaKnown RBP11.74□□□□□ -0.53
C2CD3-219ENST00000542930 BADQ92934 168 aa11.74□□□□□ -0.53
C2CD3-219ENST00000542930 AS3MTQ9HBK9 375 aa11.74□□□□□ -0.53
C2CD3-219ENST00000542930 RBPJLQ9UBG7 517 aa11.74□□□□□ -0.53
C2CD3-219ENST00000542930 DDX20Q9UHI6 824 aaKnown RBP11.74□□□□□ -0.53
C2CD3-219ENST00000542930 DENND2AQ9ULE3 1009 aa11.74□□□□□ -0.53
C2CD3-219ENST00000542930 ATP11BQ9Y2G3 1177 aa11.74□□□□□ -0.53
C2CD3-219ENST00000542930 FANCIQ9NVI1 1328 aa11.74□□□□□ -0.53
C2CD3-219ENST00000542930 NCOR1O75376 2440 aa11.74□□□□□ -0.53
C2CD3-219ENST00000542930 FAM196BA6NMK8 535 aa11.73□□□□□ -0.53
C2CD3-219ENST00000542930 NPM3O75607 178 aaKnown RBP11.73□□□□□ -0.53
C2CD3-219ENST00000542930 BTDP43251 543 aa11.73□□□□□ -0.53
C2CD3-219ENST00000542930 ERVK-9P63128 1117 aa11.73□□□□□ -0.53
C2CD3-219ENST00000542930 ERVK-24P63145 666 aa11.73□□□□□ -0.53
C2CD3-219ENST00000542930 GRIN2CQ14957 1233 aa11.73□□□□□ -0.53
C2CD3-219ENST00000542930 Q3C1V9 767 aa11.73□□□□□ -0.53
C2CD3-219ENST00000542930 MFSD14CQ5VZR4 134 aa11.73□□□□□ -0.53
C2CD3-219ENST00000542930 SLC39A5Q6ZMH5 540 aa11.73□□□□□ -0.53
C2CD3-219ENST00000542930 PLEKHH3Q7Z736 793 aa11.73□□□□□ -0.53
C2CD3-219ENST00000542930 GTF3C2Q8WUA4 911 aaPredicted RBP11.73□□□□□ -0.53
C2CD3-219ENST00000542930 EDC3Q96F86 508 aaKnown RBP11.73□□□□□ -0.53
C2CD3-219ENST00000542930 WDR18Q9BV38 432 aa11.73□□□□□ -0.53
C2CD3-219ENST00000542930 PORCNQ9H237 461 aa11.73□□□□□ -0.53
C2CD3-219ENST00000542930 PRDM5Q9NQX1 630 aaPredicted RBP11.73□□□□□ -0.53
C2CD3-219ENST00000542930 XIRP2A4UGR9 3374 aa11.73□□□□□ -0.53
C2CD3-219ENST00000542930 FRMPD3Q5JV73 1810 aa11.72□□□□□ -0.53
C2CD3-219ENST00000542930 EYA2O00167 538 aa11.72□□□□□ -0.53
C2CD3-219ENST00000542930 ZBTB22O15209 634 aa11.72□□□□□ -0.53
C2CD3-219ENST00000542930 BACE1P56817 501 aa11.72□□□□□ -0.53
C2CD3-219ENST00000542930 EXOSC9Q06265 439 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms