RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 SOX18P35713 384 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 PWP2Q15269 919 aaKnown RBP5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 GRIK5Q16478 980 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 SPRED3Q2MJR0 410 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 RPS26P11Q5JNZ5 115 aaPredicted RBP5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 ODR4Q5SWX8 454 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 COL13A1Q5TAT6 717 aaPredicted RBP5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 DIEXFQ68CQ4 756 aaKnown RBP5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 ELMSAN1Q6PJG2 1045 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 GK5Q6ZS86 529 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 DHX32Q7L7V1 743 aaKnown RBP5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 REC114Q7Z4M0 266 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 LSRQ86X29 649 aaPredicted RBP5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 WFDC8Q8IUA0 241 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 REXO1Q8N1G1 1221 aaKnown RBP5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 PRPF38AQ8NAV1 312 aaKnown RBP5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 TTC9Q92623 222 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 BHLHE41Q9C0J9 482 aaPredicted RBP5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 TNKS2Q9H2K2 1166 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 ZNF576Q9H609 170 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 BRMS1Q9HCU9 246 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 PFDN2Q9UHV9 154 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 PCDHB5Q9Y5E4 795 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 PTCH2Q9Y6C5 1203 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 KDM2BQ8NHM5 1336 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 A0A096LPE4 126 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 A0A1W2PPZ6 126 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 TPD52L2O43399 206 aaKnown RBP5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 HYAL3O43820 417 aaPredicted RBP5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 TRPA1O75762 1119 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 GJB6O95452 261 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 MAP4K4O95819 1239 aaPredicted RBP5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 CASP7P55210 303 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 GPLD1P80108 840 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 FAAP100Q0VG06 881 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 PPP2R5EQ16537 467 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 PERM1Q5SV97 790 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 IGF2-ASQ6U949 168 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 FERMT3Q86UX7 667 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 FMNL3Q8IVF7 1028 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 SYNPOQ8N3V7 929 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 JMYQ8N9B5 988 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 RBBP8NLQ8NC74 664 aaPredicted RBP5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 WFDC12Q8WWY7 111 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 CEP89Q96ST8 783 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 MYH16Q9H6N6 1097 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 HOMER2Q9NSB8 354 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 TLR7Q9NYK1 1049 aaKnown RBP5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 ZFATQ9P243 1243 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 SAMM50Q9Y512 469 aa5.35□□□□□ -1.55
SFSWAP-211ENST00000542813 ZBTB42B2RXF5 422 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 DIAPH1O60610 1272 aaKnown RBP5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 CILPO75339 1184 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 DDAH1O94760 285 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 ASMTLO95671 621 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 BPNT1O95861 308 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 IREB2P48200 963 aaKnown RBP5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 PLAURQ03405 335 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 CLCQ05315 142 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 SSRP1Q08945 709 aaKnown RBP5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 DALRD3Q5D0E6 543 aaKnown RBP5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 GORABQ5T7V8 394 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 SPATC1Q76KD6 591 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 KRT26Q7Z3Y9 468 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 KRTAP19-1Q8IUB9 90 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 CEP120Q8N960 986 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 TMEM102Q8N9M5 508 aaPredicted RBP5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 ASAP3Q8TDY4 903 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 HHIPQ96QV1 700 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 IER2Q9BTL4 223 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 TMEM39AQ9NV64 488 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 MAGEC2Q9UBF1 373 aaPredicted RBP5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 GABBR1Q9UBS5 961 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 PLAAQ9Y263 795 aa5.34□□□□□ -1.55
SFSWAP-211ENST00000542813 TTBK1Q5TCY1 1321 aaPredicted RBP5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 B2RBV5 119 aa5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 NFKBIEO00221 500 aa5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 PEX14O75381 377 aa5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 HOXD8P13378 290 aaPredicted RBP5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 NOS3P29474 1203 aa5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 CNGA1P29973 690 aa5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 ZNF157P51786 506 aaPredicted RBP5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 MLLT1Q03111 559 aaPredicted RBP5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 PPP2R3AQ06190 1150 aa5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 C6orf15Q6UXA7 325 aaPredicted RBP5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 C19orf47Q8N9M1 422 aaKnown RBP5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 ST13P5Q8NFI4 369 aaPredicted RBP5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 CCDC136Q96JN2 1154 aa5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 NSUN5Q96P11 429 aaKnown RBP5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 RNF112Q9ULX5 631 aa5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 CYP8B1Q9UNU6 501 aa5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 CD2APQ9Y5K6 639 aa5.33□□□□□ -1.56
SFSWAP-211ENST00000542813 NRLP54845 237 aa5.32□□□□□ -1.56
SFSWAP-211ENST00000542813 LRRC14Q15048 493 aa5.32□□□□□ -1.56
SFSWAP-211ENST00000542813 RASIP1Q5U651 963 aa5.32□□□□□ -1.56
SFSWAP-211ENST00000542813 FAM178BQ8IXR5 827 aa5.32□□□□□ -1.56
SFSWAP-211ENST00000542813 CCDC146Q8IYE0 955 aa5.32□□□□□ -1.56
SFSWAP-211ENST00000542813 EXOC8Q8IYI6 725 aa5.32□□□□□ -1.56
SFSWAP-211ENST00000542813 ZSWIM2Q8NEG5 633 aa5.32□□□□□ -1.56
SFSWAP-211ENST00000542813 NXPE3Q969Y0 559 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms