RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 FGD1P98174 961 aa8.63□□□□□ -1.03
XRCC4-206ENST00000542685 PLCL1Q15111 1095 aa8.63□□□□□ -1.03
XRCC4-206ENST00000542685 LRFN4Q6PJG9 635 aa8.63□□□□□ -1.03
XRCC4-206ENST00000542685 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.63□□□□□ -1.03
XRCC4-206ENST00000542685 MISP3Q96FF7 219 aa8.63□□□□□ -1.03
XRCC4-206ENST00000542685 PLPPR2Q96GM1 343 aa8.63□□□□□ -1.03
XRCC4-206ENST00000542685 PRDM10Q9NQV6 1147 aa8.63□□□□□ -1.03
XRCC4-206ENST00000542685 RNF114Q9Y508 228 aa8.63□□□□□ -1.03
XRCC4-206ENST00000542685 CLSPNQ9HAW4 1339 aa8.62□□□□□ -1.03
XRCC4-206ENST00000542685 CEACAM5P06731 702 aa8.62□□□□□ -1.03
XRCC4-206ENST00000542685 LMNB1P20700 586 aa8.62□□□□□ -1.03
XRCC4-206ENST00000542685 CD96P40200 585 aa8.62□□□□□ -1.03
XRCC4-206ENST00000542685 MAP3K11Q16584 847 aa8.62□□□□□ -1.03
XRCC4-206ENST00000542685 IFI16Q16666 785 aaKnown RBP8.62□□□□□ -1.03
XRCC4-206ENST00000542685 CBLL1Q75N03 491 aa8.62□□□□□ -1.03
XRCC4-206ENST00000542685 HDXQ7Z353 690 aa8.62□□□□□ -1.03
XRCC4-206ENST00000542685 HEXIM2Q96MH2 286 aaKnown RBP8.62□□□□□ -1.03
XRCC4-206ENST00000542685 PCGF6Q9BYE7 350 aa8.62□□□□□ -1.03
XRCC4-206ENST00000542685 SHROOM4Q9ULL8 1493 aa8.62□□□□□ -1.03
XRCC4-206ENST00000542685 WFDC3Q8IUB2 231 aa8.61□□□□□ -1.03
XRCC4-206ENST00000542685 KCT2Q8NC54 265 aa8.61□□□□□ -1.03
XRCC4-206ENST00000542685 ZNF507Q8TCN5 953 aa8.61□□□□□ -1.03
XRCC4-206ENST00000542685 GAL3ST3Q96A11 431 aa8.61□□□□□ -1.03
XRCC4-206ENST00000542685 ANP32EQ9BTT0 268 aa8.61□□□□□ -1.03
XRCC4-206ENST00000542685 MKNK2Q9HBH9 465 aa8.61□□□□□ -1.03
XRCC4-206ENST00000542685 PARP2Q9UGN5 583 aa8.61□□□□□ -1.03
XRCC4-206ENST00000542685 PLAGL2Q9UPG8 496 aa8.61□□□□□ -1.03
XRCC4-206ENST00000542685 CD8BP10966 210 aa8.6□□□□□ -1.03
XRCC4-206ENST00000542685 CDK8P49336 464 aa8.6□□□□□ -1.03
XRCC4-206ENST00000542685 PRKCQQ04759 706 aa8.6□□□□□ -1.03
XRCC4-206ENST00000542685 AOC3Q16853 763 aa8.6□□□□□ -1.03
XRCC4-206ENST00000542685 WIPI1Q5MNZ9 446 aaPredicted RBP8.6□□□□□ -1.03
XRCC4-206ENST00000542685 ARMCX6Q7L4S7 300 aa8.6□□□□□ -1.03
XRCC4-206ENST00000542685 FMNL2Q96PY5 1086 aa8.6□□□□□ -1.03
XRCC4-206ENST00000542685 GTF2IRD1Q9UHL9 959 aa8.6□□□□□ -1.03
XRCC4-206ENST00000542685 VAV3Q9UKW4 847 aa8.6□□□□□ -1.03
XRCC4-206ENST00000542685 SEPT6Q14141 434 aa8.59□□□□□ -1.03
XRCC4-206ENST00000542685 MEI1Q5TIA1 1274 aa8.59□□□□□ -1.03
XRCC4-206ENST00000542685 CYFIP1Q7L576 1253 aa8.59□□□□□ -1.03
XRCC4-206ENST00000542685 FAM214BQ7L5A3 538 aa8.59□□□□□ -1.03
XRCC4-206ENST00000542685 NPAS4Q8IUM7 802 aa8.59□□□□□ -1.03
XRCC4-206ENST00000542685 HRASLS5Q96KN8 279 aa8.59□□□□□ -1.03
XRCC4-206ENST00000542685 FBRSQ9HAH7 460 aa8.59□□□□□ -1.03
XRCC4-206ENST00000542685 PCDHB5Q9Y5E4 795 aa8.59□□□□□ -1.03
XRCC4-206ENST00000542685 TMEM265A0A087WTH1 108 aa8.58□□□□□ -1.04
XRCC4-206ENST00000542685 TXKP42681 527 aa8.58□□□□□ -1.04
XRCC4-206ENST00000542685 ETF1P62495 437 aaKnown RBP8.58□□□□□ -1.04
XRCC4-206ENST00000542685 PSMD2Q13200 908 aa8.58□□□□□ -1.04
XRCC4-206ENST00000542685 ZNF792Q3KQV3 632 aa8.58□□□□□ -1.04
XRCC4-206ENST00000542685 FAM161BQ96MY7 647 aa8.58□□□□□ -1.04
XRCC4-206ENST00000542685 KRTAP4-12Q9BQ66 201 aa8.58□□□□□ -1.04
XRCC4-206ENST00000542685 LRIG2O94898 1065 aa8.57□□□□□ -1.04
XRCC4-206ENST00000542685 EOMESO95936 686 aa8.57□□□□□ -1.04
XRCC4-206ENST00000542685 LIG3P49916 1009 aa8.57□□□□□ -1.04
XRCC4-206ENST00000542685 RPS26P62854 115 aaKnown RBP8.57□□□□□ -1.04
XRCC4-206ENST00000542685 XPCQ01831 940 aaPredicted RBP8.57□□□□□ -1.04
XRCC4-206ENST00000542685 DNAJC14Q6Y2X3 702 aaPredicted RBP8.57□□□□□ -1.04
XRCC4-206ENST00000542685 WNT10AQ9GZT5 417 aa8.57□□□□□ -1.04
XRCC4-206ENST00000542685 SNCAIPQ9Y6H5 919 aa8.57□□□□□ -1.04
XRCC4-206ENST00000542685 IGF2BP3O00425 579 aaKnown RBP eCLIP8.56□□□□□ -1.04
XRCC4-206ENST00000542685 NKG7Q16617 165 aa8.56□□□□□ -1.04
XRCC4-206ENST00000542685 PRDM5Q9NQX1 630 aaPredicted RBP8.56□□□□□ -1.04
XRCC4-206ENST00000542685 GNAT3A8MTJ3 354 aa8.55□□□□□ -1.04
XRCC4-206ENST00000542685 ITGB5P18084 799 aa8.55□□□□□ -1.04
XRCC4-206ENST00000542685 FUT4P22083 530 aa8.55□□□□□ -1.04
XRCC4-206ENST00000542685 DAB2P98082 770 aa8.55□□□□□ -1.04
XRCC4-206ENST00000542685 SLBPQ14493 270 aaKnown RBP eCLIP8.55□□□□□ -1.04
XRCC4-206ENST00000542685 AGMOQ6ZNB7 445 aa8.55□□□□□ -1.04
XRCC4-206ENST00000542685 FOXQ1Q9C009 403 aa8.55□□□□□ -1.04
XRCC4-206ENST00000542685 TNKS2Q9H2K2 1166 aa8.55□□□□□ -1.04
XRCC4-206ENST00000542685 GOLGA2P5Q9HBQ8 144 aa8.55□□□□□ -1.04
XRCC4-206ENST00000542685 SLITRK5O94991 958 aa8.54□□□□□ -1.04
XRCC4-206ENST00000542685 GRK4P32298 578 aa8.54□□□□□ -1.04
XRCC4-206ENST00000542685 TAF1CQ15572 869 aaPredicted RBP8.54□□□□□ -1.04
XRCC4-206ENST00000542685 HID1Q8IV36 788 aa8.54□□□□□ -1.04
XRCC4-206ENST00000542685 SPACA3Q8IXA5 215 aa8.54□□□□□ -1.04
XRCC4-206ENST00000542685 PI4K2BQ8TCG2 481 aa8.54□□□□□ -1.04
XRCC4-206ENST00000542685 ASIC4Q96FT7 647 aa8.54□□□□□ -1.04
XRCC4-206ENST00000542685 MIPEPQ99797 713 aa8.54□□□□□ -1.04
XRCC4-206ENST00000542685 MIR1-1HGQ9H1L0 117 aa8.54□□□□□ -1.04
XRCC4-206ENST00000542685 TPX2Q9ULW0 747 aaKnown RBP8.54□□□□□ -1.04
XRCC4-206ENST00000542685 TLR6Q9Y2C9 796 aa8.54□□□□□ -1.04
XRCC4-206ENST00000542685 SNX11Q9Y5W9 270 aa8.54□□□□□ -1.04
XRCC4-206ENST00000542685 ABCC9O60706 1549 aa8.54□□□□□ -1.04
XRCC4-206ENST00000542685 RNASE1P07998 156 aaKnown RBP8.53□□□□□ -1.04
XRCC4-206ENST00000542685 JUNBP17275 347 aaPredicted RBP8.53□□□□□ -1.04
XRCC4-206ENST00000542685 NKPD1Q17RQ9 610 aa8.53□□□□□ -1.04
XRCC4-206ENST00000542685 XAGE3Q8WTP9 111 aa8.53□□□□□ -1.04
XRCC4-206ENST00000542685 JARID2Q92833 1246 aaPredicted RBP8.53□□□□□ -1.04
XRCC4-206ENST00000542685 RC3H2Q9HBD1 1191 aaKnown RBP8.53□□□□□ -1.04
XRCC4-206ENST00000542685 ADAMTS6Q9UKP5 1117 aa8.53□□□□□ -1.04
XRCC4-206ENST00000542685 GFRA2O00451 464 aa8.52□□□□□ -1.05
XRCC4-206ENST00000542685 CTSHP09668 335 aa8.52□□□□□ -1.05
XRCC4-206ENST00000542685 TFE3P19532 575 aaPredicted RBP8.52□□□□□ -1.05
XRCC4-206ENST00000542685 TRIM26Q12899 539 aaPredicted RBP8.52□□□□□ -1.05
XRCC4-206ENST00000542685 ANGEL2Q5VTE6 544 aaKnown RBP8.52□□□□□ -1.05
XRCC4-206ENST00000542685 TMC4Q7Z404 712 aa8.52□□□□□ -1.05
XRCC4-206ENST00000542685 FBXO33Q7Z6M2 555 aa8.52□□□□□ -1.05
XRCC4-206ENST00000542685 MFSD2AQ8NA29 543 aa8.52□□□□□ -1.05
XRCC4-206ENST00000542685 ASB11Q8WXH4 323 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms