RNA–Protein interactions for RNA: ENST00000541948.2

NECAP1-205, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-205ENST00000541948 MIGA1Q8NAN2 632 aa9.41□□□□□ -0.9
NECAP1-205ENST00000541948 CD99L2Q8TCZ2 262 aa9.41□□□□□ -0.9
NECAP1-205ENST00000541948 ZCCHC17Q9NP64 241 aaKnown RBP9.41□□□□□ -0.9
NECAP1-205ENST00000541948 PCDHB15Q9Y5E8 787 aa9.41□□□□□ -0.9
NECAP1-205ENST00000541948 NAV1Q8NEY1 1877 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 TCRBV5S4A2TA0A5A2 114 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 SMIM22K7EJ46 135 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 TBC1D12O60347 775 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 SLC34A2O95436 690 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 LDHCP07864 332 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 MS4A1P11836 297 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 CYP7A1P22680 504 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 SOX10P56693 466 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 SLC4A8Q2Y0W8 1093 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 MAPKAPK5Q8IW41 473 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 ZSCAN29Q8IWY8 852 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-205ENST00000541948 TEX11Q8IYF3 940 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 MAGEB6Q8N7X4 407 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 TGFBRAP1Q8WUH2 860 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 GCC1Q96CN9 775 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 KIF1BPQ96EK5 621 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 ERO1AQ96HE7 468 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 RIOK1Q9BRS2 568 aaKnown RBP9.4□□□□□ -0.9
NECAP1-205ENST00000541948 PALD1Q9ULE6 856 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 AFG3L2Q9Y4W6 797 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 ZHX2Q9Y6X8 837 aa9.4□□□□□ -0.9
NECAP1-205ENST00000541948 MYH7P12883 1935 aa9.39□□□□□ -0.91
NECAP1-205ENST00000541948 MGAMO43451 1857 aa9.39□□□□□ -0.91
NECAP1-205ENST00000541948 IDH1O75874 414 aaKnown RBP9.39□□□□□ -0.91
NECAP1-205ENST00000541948 GNRH1P01148 92 aa9.39□□□□□ -0.91
NECAP1-205ENST00000541948 CYP2C8P10632 490 aa9.39□□□□□ -0.91
NECAP1-205ENST00000541948 CETPP11597 493 aa9.39□□□□□ -0.91
NECAP1-205ENST00000541948 CAPN2P17655 700 aa9.39□□□□□ -0.91
NECAP1-205ENST00000541948 GSTO1P78417 241 aa9.39□□□□□ -0.91
NECAP1-205ENST00000541948 SNAPC2Q13487 334 aa9.39□□□□□ -0.91
NECAP1-205ENST00000541948 TAF1CQ15572 869 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-205ENST00000541948 SAMD1Q6SPF0 538 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-205ENST00000541948 METTL16Q86W50 562 aaKnown RBP9.39□□□□□ -0.91
NECAP1-205ENST00000541948 ERC1Q8IUD2 1116 aa9.39□□□□□ -0.91
NECAP1-205ENST00000541948 SLF2Q8IX21 1173 aa9.39□□□□□ -0.91
NECAP1-205ENST00000541948 BCL11AQ9H165 835 aa9.39□□□□□ -0.91
NECAP1-205ENST00000541948 SAP30BPQ9UHR5 308 aaKnown RBP9.39□□□□□ -0.91
NECAP1-205ENST00000541948 TRIM17Q9Y577 477 aa9.39□□□□□ -0.91
NECAP1-205ENST00000541948 RBBP6Q7Z6E9 1792 aaKnown RBP9.38□□□□□ -0.91
NECAP1-205ENST00000541948 A0A0G2JLL6 359 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-205ENST00000541948 PDHXO00330 501 aa9.38□□□□□ -0.91
NECAP1-205ENST00000541948 TLR2O60603 784 aa9.38□□□□□ -0.91
NECAP1-205ENST00000541948 ECM2O94769 699 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-205ENST00000541948 RRP1P56182 461 aaKnown RBP9.38□□□□□ -0.91
NECAP1-205ENST00000541948 SP3Q02447 781 aa9.38□□□□□ -0.91
NECAP1-205ENST00000541948 TREML2Q5T2D2 321 aa9.38□□□□□ -0.91
NECAP1-205ENST00000541948 TSHZ3Q63HK5 1081 aa9.38□□□□□ -0.91
NECAP1-205ENST00000541948 POTEEQ6S8J3 1075 aa9.38□□□□□ -0.91
NECAP1-205ENST00000541948 C17orf99Q6UX52 265 aa9.38□□□□□ -0.91
NECAP1-205ENST00000541948 PRRT2Q7Z6L0 340 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-205ENST00000541948 ANKRD23Q86SG2 305 aa9.38□□□□□ -0.91
NECAP1-205ENST00000541948 OTUD7AQ8TE49 926 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-205ENST00000541948 YTHDC1Q96MU7 727 aaKnown RBP9.38□□□□□ -0.91
NECAP1-205ENST00000541948 DCTPP1Q9H773 170 aa9.38□□□□□ -0.91
NECAP1-205ENST00000541948 CPA4Q9UI42 421 aa9.38□□□□□ -0.91
NECAP1-205ENST00000541948 PTPN22Q9Y2R2 807 aa9.38□□□□□ -0.91
NECAP1-205ENST00000541948 HTTP42858 3142 aa9.38□□□□□ -0.91
NECAP1-205ENST00000541948 BAZ2AQ9UIF9 1905 aaKnown RBP9.37□□□□□ -0.91
NECAP1-205ENST00000541948 GOLIM4O00461 696 aa9.37□□□□□ -0.91
NECAP1-205ENST00000541948 PEX10O60683 326 aa9.37□□□□□ -0.91
NECAP1-205ENST00000541948 CTNND1O60716 968 aaKnown RBP9.37□□□□□ -0.91
NECAP1-205ENST00000541948 RAB11FIP3O75154 756 aa9.37□□□□□ -0.91
NECAP1-205ENST00000541948 MAP4K4O95819 1239 aaPredicted RBP9.37□□□□□ -0.91
NECAP1-205ENST00000541948 PDE6AP16499 860 aa9.37□□□□□ -0.91
NECAP1-205ENST00000541948 CAP2P40123 477 aa9.37□□□□□ -0.91
NECAP1-205ENST00000541948 PRMT2P55345 433 aa9.37□□□□□ -0.91
NECAP1-205ENST00000541948 PRPF38BQ5VTL8 546 aaKnown RBP9.37□□□□□ -0.91
NECAP1-205ENST00000541948 NBPF11Q86T75 865 aa9.37□□□□□ -0.91
NECAP1-205ENST00000541948 CLASRPQ8N2M8 674 aaKnown RBP9.37□□□□□ -0.91
NECAP1-205ENST00000541948 LCORLQ8N3X6 602 aa9.37□□□□□ -0.91
NECAP1-205ENST00000541948 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.37□□□□□ -0.91
NECAP1-205ENST00000541948 CRBNQ96SW2 442 aa9.37□□□□□ -0.91
NECAP1-205ENST00000541948 DNAJC2Q99543 621 aaKnown RBP9.37□□□□□ -0.91
NECAP1-205ENST00000541948 BOLA2Q9H3K6 86 aa9.37□□□□□ -0.91
NECAP1-205ENST00000541948 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.37□□□□□ -0.91
NECAP1-205ENST00000541948 TNRC18O15417 2968 aaPredicted RBP9.36□□□□□ -0.91
NECAP1-205ENST00000541948 ZNF532Q9HCE3 1301 aa9.36□□□□□ -0.91
NECAP1-205ENST00000541948 PLXNB2O15031 1838 aa9.36□□□□□ -0.91
NECAP1-205ENST00000541948 POTEFA5A3E0 1075 aa9.36□□□□□ -0.91
NECAP1-205ENST00000541948 TRIM75PA6NK02 468 aa9.36□□□□□ -0.91
NECAP1-205ENST00000541948 CXCL11O14625 94 aa9.36□□□□□ -0.91
NECAP1-205ENST00000541948 PRKAB2O43741 272 aa9.36□□□□□ -0.91
NECAP1-205ENST00000541948 HMMRO75330 724 aa9.36□□□□□ -0.91
NECAP1-205ENST00000541948 GDF11O95390 407 aa9.36□□□□□ -0.91
NECAP1-205ENST00000541948 MYCNP04198 464 aaPredicted RBP9.36□□□□□ -0.91
NECAP1-205ENST00000541948 CYP2D6P10635 497 aa9.36□□□□□ -0.91
NECAP1-205ENST00000541948 BCRP11274 1271 aa9.36□□□□□ -0.91
NECAP1-205ENST00000541948 ATP5JP18859 108 aa9.36□□□□□ -0.91
NECAP1-205ENST00000541948 PLCD1P51178 756 aa9.36□□□□□ -0.91
NECAP1-205ENST00000541948 LACTBP83111 547 aaPredicted RBP9.36□□□□□ -0.91
NECAP1-205ENST00000541948 SPP2Q13103 211 aa9.36□□□□□ -0.91
NECAP1-205ENST00000541948 HSP90AB4PQ58FF6 505 aa9.36□□□□□ -0.91
NECAP1-205ENST00000541948 HAUS7Q99871 368 aa9.36□□□□□ -0.91
NECAP1-205ENST00000541948 ZFYVE28Q9HCC9 887 aa9.36□□□□□ -0.91
NECAP1-205ENST00000541948 PI4KBQ9UBF8 816 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms