RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 ATRNL1Q5VV63 1379 aa12.35□□□□□ -0.43
CHFR-220ENST00000541817 FAM196BA6NMK8 535 aa12.35□□□□□ -0.43
CHFR-220ENST00000541817 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
CHFR-220ENST00000541817 ITGB8P26012 769 aa12.35□□□□□ -0.43
CHFR-220ENST00000541817 GCLCP48506 637 aaPredicted RBP12.35□□□□□ -0.43
CHFR-220ENST00000541817 HMGCS2P54868 508 aa12.35□□□□□ -0.43
CHFR-220ENST00000541817 SPP2Q13103 211 aa12.35□□□□□ -0.43
CHFR-220ENST00000541817 TRIM60Q495X7 471 aa12.35□□□□□ -0.43
CHFR-220ENST00000541817 ANO1Q5XXA6 986 aa12.35□□□□□ -0.43
CHFR-220ENST00000541817 SLC39A5Q6ZMH5 540 aa12.35□□□□□ -0.43
CHFR-220ENST00000541817 SH3BP5LQ7L8J4 393 aa12.35□□□□□ -0.43
CHFR-220ENST00000541817 ZSCAN29Q8IWY8 852 aaPredicted RBP12.35□□□□□ -0.43
CHFR-220ENST00000541817 RUNDC1Q96C34 613 aa12.35□□□□□ -0.43
CHFR-220ENST00000541817 GAS2L1Q99501 681 aaPredicted RBP12.35□□□□□ -0.43
CHFR-220ENST00000541817 MRIQ9BWK5 157 aa12.35□□□□□ -0.43
CHFR-220ENST00000541817 MYH16Q9H6N6 1097 aa12.35□□□□□ -0.43
CHFR-220ENST00000541817 TXNRD2Q9NNW7 524 aa12.35□□□□□ -0.43
CHFR-220ENST00000541817 NDUFB9Q9Y6M9 179 aa12.35□□□□□ -0.43
CHFR-220ENST00000541817 RLFQ13129 1914 aa12.35□□□□□ -0.43
CHFR-220ENST00000541817 REV3LO60673 3130 aa12.34□□□□□ -0.43
CHFR-220ENST00000541817 ANP32CO43423 234 aa12.34□□□□□ -0.43
CHFR-220ENST00000541817 IGFBP4P22692 258 aa12.34□□□□□ -0.43
CHFR-220ENST00000541817 TFF2Q03403 129 aa12.34□□□□□ -0.43
CHFR-220ENST00000541817 ADGRE1Q14246 886 aa12.34□□□□□ -0.43
CHFR-220ENST00000541817 PDLIM7Q9NR12 457 aa12.34□□□□□ -0.43
CHFR-220ENST00000541817 FLRT1Q9NZU1 646 aa12.34□□□□□ -0.43
CHFR-220ENST00000541817 PLXNA1Q9UIW2 1896 aa12.34□□□□□ -0.43
CHFR-220ENST00000541817 DDTLA6NHG4 134 aaPredicted RBP12.33□□□□□ -0.44
CHFR-220ENST00000541817 GRXCR1A8MXD5 290 aa12.33□□□□□ -0.44
CHFR-220ENST00000541817 SLC4A2P04920 1241 aa12.33□□□□□ -0.44
CHFR-220ENST00000541817 XRCC5P13010 732 aaKnown RBP12.33□□□□□ -0.44
CHFR-220ENST00000541817 PBX2P40425 430 aa12.33□□□□□ -0.44
CHFR-220ENST00000541817 RGS3P49796 1198 aa12.33□□□□□ -0.44
CHFR-220ENST00000541817 KCNQ1P51787 676 aa12.33□□□□□ -0.44
CHFR-220ENST00000541817 Q3C1V9 767 aa12.33□□□□□ -0.44
CHFR-220ENST00000541817 USP6NLQ92738 828 aa12.33□□□□□ -0.44
CHFR-220ENST00000541817 TIFAQ96CG3 184 aa12.33□□□□□ -0.44
CHFR-220ENST00000541817 STK31Q9BXU1 1019 aa12.33□□□□□ -0.44
CHFR-220ENST00000541817 PORCNQ9H237 461 aa12.33□□□□□ -0.44
CHFR-220ENST00000541817 MAST3O60307 1309 aa12.33□□□□□ -0.44
CHFR-220ENST00000541817 CTNND1O60716 968 aaKnown RBP12.32□□□□□ -0.44
CHFR-220ENST00000541817 BMP1P13497 986 aa12.32□□□□□ -0.44
CHFR-220ENST00000541817 GNAI1P63096 354 aa12.32□□□□□ -0.44
CHFR-220ENST00000541817 LRRC24Q50LG9 513 aa12.32□□□□□ -0.44
CHFR-220ENST00000541817 CAVIN4Q5BKX8 364 aa12.32□□□□□ -0.44
CHFR-220ENST00000541817 PROCA1Q8NCQ7 364 aaPredicted RBP12.32□□□□□ -0.44
CHFR-220ENST00000541817 LINS1Q8NG48 757 aa12.32□□□□□ -0.44
CHFR-220ENST00000541817 SOCS4Q8WXH5 440 aa12.32□□□□□ -0.44
CHFR-220ENST00000541817 DNAAF4Q8WXU2 420 aa12.32□□□□□ -0.44
CHFR-220ENST00000541817 FERMT2Q96AC1 680 aa12.32□□□□□ -0.44
CHFR-220ENST00000541817 P2RX7Q99572 595 aaKnown RBP12.32□□□□□ -0.44
CHFR-220ENST00000541817 IFT57Q9NWB7 429 aa12.32□□□□□ -0.44
CHFR-220ENST00000541817 MORF4L1Q9UBU8 362 aa12.32□□□□□ -0.44
CHFR-220ENST00000541817 DDX20Q9UHI6 824 aaKnown RBP12.32□□□□□ -0.44
CHFR-220ENST00000541817 ARIH1Q9Y4X5 557 aaPredicted RBP12.32□□□□□ -0.44
CHFR-220ENST00000541817 LOC285556D6RIA3 1793 aa12.32□□□□□ -0.44
CHFR-220ENST00000541817 MYO9BQ13459 2157 aa12.31□□□□□ -0.44
CHFR-220ENST00000541817 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.31□□□□□ -0.44
CHFR-220ENST00000541817 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.31□□□□□ -0.44
CHFR-220ENST00000541817 CCER2I3L3R5 266 aa12.31□□□□□ -0.44
CHFR-220ENST00000541817 DNM1LO00429 736 aa12.31□□□□□ -0.44
CHFR-220ENST00000541817 PRDX5P30044 214 aa12.31□□□□□ -0.44
CHFR-220ENST00000541817 RGS2P41220 211 aa12.31□□□□□ -0.44
CHFR-220ENST00000541817 MRE11P49959 708 aa12.31□□□□□ -0.44
CHFR-220ENST00000541817 FKBP5Q13451 457 aaPredicted RBP12.31□□□□□ -0.44
CHFR-220ENST00000541817 TMEM31Q5JXX7 168 aa12.31□□□□□ -0.44
CHFR-220ENST00000541817 MORN1Q5T089 497 aa12.31□□□□□ -0.44
CHFR-220ENST00000541817 MICALL1Q8N3F8 863 aa12.31□□□□□ -0.44
CHFR-220ENST00000541817 TRPV1Q8NER1 839 aa12.31□□□□□ -0.44
CHFR-220ENST00000541817 LPAR1Q92633 364 aa12.31□□□□□ -0.44
CHFR-220ENST00000541817 KHSRPQ92945 711 aaKnown RBP eCLIP12.31□□□□□ -0.44
CHFR-220ENST00000541817 PAGR1Q9BTK6 254 aa12.31□□□□□ -0.44
CHFR-220ENST00000541817 F6X3S4 739 aa12.3□□□□□ -0.44
CHFR-220ENST00000541817 IRX3P78415 501 aaPredicted RBP12.3□□□□□ -0.44
CHFR-220ENST00000541817 PICALMQ13492 652 aa12.3□□□□□ -0.44
CHFR-220ENST00000541817 AKNAD1Q5T1N1 836 aa12.3□□□□□ -0.44
CHFR-220ENST00000541817 CCDC129Q6ZRS4 1044 aa12.3□□□□□ -0.44
CHFR-220ENST00000541817 GPR142Q7Z601 462 aa12.3□□□□□ -0.44
CHFR-220ENST00000541817 CCAR1Q8IX12 1150 aaKnown RBP12.3□□□□□ -0.44
CHFR-220ENST00000541817 TRMT44Q8IYL2 757 aaKnown RBP12.3□□□□□ -0.44
CHFR-220ENST00000541817 GPRC5AQ8NFJ5 357 aa12.3□□□□□ -0.44
CHFR-220ENST00000541817 TSR2Q969E8 191 aaKnown RBP12.3□□□□□ -0.44
CHFR-220ENST00000541817 C11orf16Q9NQ32 467 aa12.3□□□□□ -0.44
CHFR-220ENST00000541817 DDX4Q9NQI0 724 aaKnown RBP12.3□□□□□ -0.44
CHFR-220ENST00000541817 BDP1A6H8Y1 2624 aa12.3□□□□□ -0.44
CHFR-220ENST00000541817 MYH13Q9UKX3 1938 aa12.29□□□□□ -0.44
CHFR-220ENST00000541817 CYP2C19P33261 490 aa12.29□□□□□ -0.44
CHFR-220ENST00000541817 ADCYAP1R1P41586 468 aa12.29□□□□□ -0.44
CHFR-220ENST00000541817 TLE2Q04725 743 aa12.29□□□□□ -0.44
CHFR-220ENST00000541817 FLIIQ13045 1269 aa12.29□□□□□ -0.44
CHFR-220ENST00000541817 PABPC4Q13310 644 aaKnown RBP eCLIP12.29□□□□□ -0.44
CHFR-220ENST00000541817 RRP1BQ14684 758 aaKnown RBP12.29□□□□□ -0.44
CHFR-220ENST00000541817 METTL24Q5JXM2 366 aa12.29□□□□□ -0.44
CHFR-220ENST00000541817 ZNF280CQ8ND82 737 aa12.29□□□□□ -0.44
CHFR-220ENST00000541817 APBA2Q99767 749 aa12.29□□□□□ -0.44
CHFR-220ENST00000541817 RBPJLQ9UBG7 517 aa12.29□□□□□ -0.44
CHFR-220ENST00000541817 ADAMTS8Q9UP79 889 aa12.29□□□□□ -0.44
CHFR-220ENST00000541817 SUGT1Q9Y2Z0 365 aa12.29□□□□□ -0.44
CHFR-220ENST00000541817 ATAD5Q96QE3 1844 aa12.29□□□□□ -0.44
CHFR-220ENST00000541817 HERVK_113P62684 666 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms