RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 OBP2AQ9NY56 170 aa6.81□□□□□ -1.32
DDB1-219ENST00000541513 PGAP2Q9UHJ9 254 aa6.81□□□□□ -1.32
DDB1-219ENST00000541513 USP25Q9UHP3 1055 aa6.81□□□□□ -1.32
DDB1-219ENST00000541513 SERTAD1Q9UHV2 236 aa6.81□□□□□ -1.32
DDB1-219ENST00000541513 PFDN2Q9UHV9 154 aa6.81□□□□□ -1.32
DDB1-219ENST00000541513 PPT2Q9UMR5 302 aa6.81□□□□□ -1.32
DDB1-219ENST00000541513 SPEF1Q9Y4P9 236 aa6.81□□□□□ -1.32
DDB1-219ENST00000541513 NAIPQ13075 1403 aa6.81□□□□□ -1.32
DDB1-219ENST00000541513 VWDEQ8N2E2 1590 aa6.81□□□□□ -1.32
DDB1-219ENST00000541513 CEP152O94986 1710 aa6.81□□□□□ -1.32
DDB1-219ENST00000541513 RIMS1Q86UR5 1692 aaKnown RBP6.81□□□□□ -1.32
DDB1-219ENST00000541513 DNAJC25-GNG10A0A024R161 153 aa6.8□□□□□ -1.32
DDB1-219ENST00000541513 ANO9A1A5B4 782 aa6.8□□□□□ -1.32
DDB1-219ENST00000541513 EML1O00423 815 aa6.8□□□□□ -1.32
DDB1-219ENST00000541513 U2AF1L5P0DN76 240 aaPredicted RBP6.8□□□□□ -1.32
DDB1-219ENST00000541513 PHKG2P15735 406 aa6.8□□□□□ -1.32
DDB1-219ENST00000541513 U2AF1Q01081 240 aaKnown RBP eCLIP6.8□□□□□ -1.32
DDB1-219ENST00000541513 LMNB2Q03252 620 aa6.8□□□□□ -1.32
DDB1-219ENST00000541513 SEPT6Q14141 434 aa6.8□□□□□ -1.32
DDB1-219ENST00000541513 C21orf62-AS1Q17RA5 79 aa6.8□□□□□ -1.32
DDB1-219ENST00000541513 C4orf48Q5BLP8 95 aa6.8□□□□□ -1.32
DDB1-219ENST00000541513 TBCELQ5QJ74 424 aa6.8□□□□□ -1.32
DDB1-219ENST00000541513 ERICH6BQ5W0A0 696 aa6.8□□□□□ -1.32
DDB1-219ENST00000541513 MORC1Q86VD1 984 aa6.8□□□□□ -1.32
DDB1-219ENST00000541513 ANKK1Q8NFD2 765 aa6.8□□□□□ -1.32
DDB1-219ENST00000541513 PJA1Q8NG27 643 aa6.8□□□□□ -1.32
DDB1-219ENST00000541513 TRMT2BQ96GJ1 504 aaKnown RBP6.8□□□□□ -1.32
DDB1-219ENST00000541513 MUC3BQ9H195 1237 aa6.8□□□□□ -1.32
DDB1-219ENST00000541513 PRDM11Q9NQV5 511 aa6.8□□□□□ -1.32
DDB1-219ENST00000541513 CNTLNQ9NXG0 1405 aa6.8□□□□□ -1.32
DDB1-219ENST00000541513 FOXD3Q9UJU5 478 aaPredicted RBP6.8□□□□□ -1.32
DDB1-219ENST00000541513 CLTCQ00610 1675 aaKnown RBP6.8□□□□□ -1.32
DDB1-219ENST00000541513 IQGAP3Q86VI3 1631 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 F6X3S4 739 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 TCERG1O14776 1098 aaKnown RBP6.79□□□□□ -1.32
DDB1-219ENST00000541513 PRPF3O43395 683 aaKnown RBP6.79□□□□□ -1.32
DDB1-219ENST00000541513 STAU1O95793 577 aaKnown RBP6.79□□□□□ -1.32
DDB1-219ENST00000541513 SARSP49591 514 aaKnown RBP6.79□□□□□ -1.32
DDB1-219ENST00000541513 SMTNP53814 917 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 RBM10P98175 930 aaKnown RBP6.79□□□□□ -1.32
DDB1-219ENST00000541513 GRM2Q14416 872 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 HYIQ5T013 277 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 FAM196AQ6ZSG2 479 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 TOGARAM2Q6ZUX3 1019 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 SV2BQ7L1I2 683 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 KRT77Q7Z794 578 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 TREML1Q86YW5 311 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 GALNT12Q8IXK2 581 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 ALDH16A1Q8IZ83 802 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 UBR7Q8N806 425 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 CCDC89Q8N998 374 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 RBBP8NLQ8NC74 664 aaPredicted RBP6.79□□□□□ -1.32
DDB1-219ENST00000541513 TRIM52Q96A61 297 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 IFT122Q9HBG6 1241 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 ASAP1Q9ULH1 1129 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 DAAM1Q9Y4D1 1078 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 CFAP65Q6ZU64 1925 aaKnown RBP6.79□□□□□ -1.32
DDB1-219ENST00000541513 LMTK2Q8IWU2 1503 aa6.79□□□□□ -1.32
DDB1-219ENST00000541513 TET3O43151 1660 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 C3P01024 1663 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 ABCC3O15438 1527 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 SOWAHBA6NEL2 793 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 CDK2AP1O14519 115 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 RNF40O75150 1001 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 MICAL2O94851 1124 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 PF4P02776 101 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 NBPF7P0C2Y1 421 aaPredicted RBP6.78□□□□□ -1.32
DDB1-219ENST00000541513 TYRP1P17643 537 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 SETDB1Q15047 1291 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 TEAD4Q15561 434 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 CTC1Q2NKJ3 1217 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 CCDC184Q52MB2 194 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 FNDC3BQ53EP0 1204 aaKnown RBP6.78□□□□□ -1.32
DDB1-219ENST00000541513 SNAP47Q5SQN1 464 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 RNF219Q5W0B1 726 aaPredicted RBP6.78□□□□□ -1.32
DDB1-219ENST00000541513 ANO1Q5XXA6 986 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 LARP1BQ659C4 914 aaKnown RBP6.78□□□□□ -1.32
DDB1-219ENST00000541513 ZBTB46Q86UZ6 589 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 ANKRD42Q8N9B4 389 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 C19orf47Q8N9M1 422 aaKnown RBP6.78□□□□□ -1.32
DDB1-219ENST00000541513 GOLM1Q8NBJ4 401 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 ZFRQ96KR1 1074 aaKnown RBP6.78□□□□□ -1.32
DDB1-219ENST00000541513 KIF2CQ99661 725 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 SELENOOQ9BVL4 669 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 RUSC1Q9BVN2 902 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 RHOBTB2Q9BYZ6 727 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 TNKS2Q9H2K2 1166 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 AASDHPPTQ9NRN7 309 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 INTS7Q9NVH2 962 aaKnown RBP6.78□□□□□ -1.32
DDB1-219ENST00000541513 SLC5A4Q9NY91 659 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 POLG2Q9UHN1 485 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 ZNF180Q9UJW8 692 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 PDZRN3Q9UPQ7 1066 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 MAP4K5Q9Y4K4 846 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 CAMSAP1Q5T5Y3 1602 aa6.78□□□□□ -1.32
DDB1-219ENST00000541513 SETD5Q9C0A6 1442 aa6.77□□□□□ -1.33
DDB1-219ENST00000541513 RASSF10A6NK89 507 aa6.77□□□□□ -1.33
DDB1-219ENST00000541513 ADCY3O60266 1144 aa6.77□□□□□ -1.33
DDB1-219ENST00000541513 FAM153BP0C7A2 387 aa6.77□□□□□ -1.33
DDB1-219ENST00000541513 LIG3P49916 1009 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms