RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.46■■□□□ 1.51
ATN1-204ENST00000541029 PDHXO00330 501 aa24.45■■□□□ 1.5
ATN1-204ENST00000541029 CTNND1O60716 968 aaKnown RBP24.45■■□□□ 1.5
ATN1-204ENST00000541029 CYP7A1P22680 504 aa24.45■■□□□ 1.5
ATN1-204ENST00000541029 MAPKAPK5Q8IW41 473 aa24.45■■□□□ 1.5
ATN1-204ENST00000541029 TGFBRAP1Q8WUH2 860 aa24.45■■□□□ 1.5
ATN1-204ENST00000541029 BCL11AQ9H165 835 aa24.45■■□□□ 1.5
ATN1-204ENST00000541029 CXCL11O14625 94 aa24.44■■□□□ 1.5
ATN1-204ENST00000541029 IGSF3O75054 1194 aa24.44■■□□□ 1.5
ATN1-204ENST00000541029 DYNLL1P63167 89 aaKnown RBP24.44■■□□□ 1.5
ATN1-204ENST00000541029 CLASRPQ8N2M8 674 aaKnown RBP24.44■■□□□ 1.5
ATN1-204ENST00000541029 MAGEB6Q8N7X4 407 aa24.44■■□□□ 1.5
ATN1-204ENST00000541029 PTPN22Q9Y2R2 807 aa24.44■■□□□ 1.5
ATN1-204ENST00000541029 ADGRA2Q96PE1 1338 aa24.43■■□□□ 1.5
ATN1-204ENST00000541029 A0A0G2JLL6 359 aaPredicted RBP24.43■■□□□ 1.5
ATN1-204ENST00000541029 PRRT2Q7Z6L0 340 aaPredicted RBP24.43■■□□□ 1.5
ATN1-204ENST00000541029 MIGA1Q8NAN2 632 aa24.43■■□□□ 1.5
ATN1-204ENST00000541029 AFG3L2Q9Y4W6 797 aa24.43■■□□□ 1.5
ATN1-204ENST00000541029 GPAT2Q6NUI2 795 aa24.42■■□□□ 1.5
ATN1-204ENST00000541029 ARHGAP39Q9C0H5 1083 aa24.42■■□□□ 1.5
ATN1-204ENST00000541029 CPA4Q9UI42 421 aa24.42■■□□□ 1.5
ATN1-204ENST00000541029 BRCA2P51587 3418 aa24.41■■□□□ 1.5
ATN1-204ENST00000541029 TRIM75PA6NK02 468 aa24.41■■□□□ 1.5
ATN1-204ENST00000541029 RAB11FIP3O75154 756 aa24.41■■□□□ 1.5
ATN1-204ENST00000541029 IFIT2P09913 472 aaKnown RBP24.41■■□□□ 1.5
ATN1-204ENST00000541029 RRP1BQ14684 758 aaKnown RBP24.41■■□□□ 1.5
ATN1-204ENST00000541029 HERC5Q9UII4 1024 aaKnown RBP24.41■■□□□ 1.5
ATN1-204ENST00000541029 PDE4DIPQ5VU43 2346 aa24.4■■□□□ 1.5
ATN1-204ENST00000541029 LACTBP83111 547 aaPredicted RBP24.4■■□□□ 1.5
ATN1-204ENST00000541029 MAP3K12Q12852 859 aa24.4■■□□□ 1.5
ATN1-204ENST00000541029 GADL1Q6ZQY3 521 aa24.4■■□□□ 1.5
ATN1-204ENST00000541029 PARK7Q99497 189 aaKnown RBP24.4■■□□□ 1.5
ATN1-204ENST00000541029 DHX36Q9H2U1 1008 aaKnown RBP24.4■■□□□ 1.5
ATN1-204ENST00000541029 PI4KBQ9UBF8 816 aa24.4■■□□□ 1.5
ATN1-204ENST00000541029 SAP30BPQ9UHR5 308 aaKnown RBP24.4■■□□□ 1.5
ATN1-204ENST00000541029 KIAA0100Q14667 2235 aaKnown RBP24.39■■□□□ 1.5
ATN1-204ENST00000541029 ECM2O94769 699 aaPredicted RBP24.39■■□□□ 1.49
ATN1-204ENST00000541029 SLC4A8Q2Y0W8 1093 aa24.39■■□□□ 1.49
ATN1-204ENST00000541029 C17orf99Q6UX52 265 aa24.39■■□□□ 1.49
ATN1-204ENST00000541029 DNAJC2Q99543 621 aaKnown RBP24.39■■□□□ 1.49
ATN1-204ENST00000541029 DNAJC18Q9H819 358 aa24.39■■□□□ 1.49
ATN1-204ENST00000541029 PALD1Q9ULE6 856 aa24.39■■□□□ 1.49
ATN1-204ENST00000541029 MYH8P13535 1937 aa24.38■■□□□ 1.49
ATN1-204ENST00000541029 CYP2C8P10632 490 aa24.38■■□□□ 1.49
ATN1-204ENST00000541029 CAP2P40123 477 aa24.38■■□□□ 1.49
ATN1-204ENST00000541029 FASTKD5Q7L8L6 764 aaKnown RBP24.38■■□□□ 1.49
ATN1-204ENST00000541029 PTCH2Q9Y6C5 1203 aa24.38■■□□□ 1.49
ATN1-204ENST00000541029 KIF22Q14807 665 aa24.37■■□□□ 1.49
ATN1-204ENST00000541029 ARHGEF6Q15052 776 aa24.37■■□□□ 1.49
ATN1-204ENST00000541029 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.37■■□□□ 1.49
ATN1-204ENST00000541029 GOLIM4O00461 696 aa24.36■■□□□ 1.49
ATN1-204ENST00000541029 TTF1Q15361 905 aaPredicted RBP24.36■■□□□ 1.49
ATN1-204ENST00000541029 CRACR2BQ8N4Y2 399 aaPredicted RBP24.36■■□□□ 1.49
ATN1-204ENST00000541029 BAZ2AQ9UIF9 1905 aaKnown RBP24.35■■□□□ 1.49
ATN1-204ENST00000541029 PDE6AP16499 860 aa24.35■■□□□ 1.49
ATN1-204ENST00000541029 CTGFP29279 349 aa24.35■■□□□ 1.49
ATN1-204ENST00000541029 USP5P45974 858 aa24.35■■□□□ 1.49
ATN1-204ENST00000541029 CERS3Q8IU89 383 aa24.35■■□□□ 1.49
ATN1-204ENST00000541029 EDC3Q96F86 508 aaKnown RBP24.35■■□□□ 1.49
ATN1-204ENST00000541029 TRIM34Q9BYJ4 488 aa24.35■■□□□ 1.49
ATN1-204ENST00000541029 HLA-DOAP06340 250 aa24.34■■□□□ 1.49
ATN1-204ENST00000541029 BCRP11274 1271 aa24.34■■□□□ 1.49
ATN1-204ENST00000541029 SPP2Q13103 211 aa24.34■■□□□ 1.49
ATN1-204ENST00000541029 SHROOM1Q2M3G4 852 aaPredicted RBP24.34■■□□□ 1.49
ATN1-204ENST00000541029 TREML2Q5T2D2 321 aa24.34■■□□□ 1.49
ATN1-204ENST00000541029 TMED8Q6PL24 325 aaPredicted RBP24.34■■□□□ 1.49
ATN1-204ENST00000541029 METTL16Q86W50 562 aaKnown RBP24.34■■□□□ 1.49
ATN1-204ENST00000541029 ZNF280CQ8ND82 737 aa24.34■■□□□ 1.49
ATN1-204ENST00000541029 ARMC5Q96C12 935 aa24.34■■□□□ 1.49
ATN1-204ENST00000541029 RIOK1Q9BRS2 568 aaKnown RBP24.34■■□□□ 1.49
ATN1-204ENST00000541029 SMARCA5O60264 1052 aaPredicted RBP24.33■■□□□ 1.49
ATN1-204ENST00000541029 GDF11O95390 407 aa24.33■■□□□ 1.49
ATN1-204ENST00000541029 JAG1P78504 1218 aa24.33■■□□□ 1.49
ATN1-204ENST00000541029 SLC9C2Q5TAH2 1124 aa24.33■■□□□ 1.49
ATN1-204ENST00000541029 LRRCC1Q9C099 1032 aa24.33■■□□□ 1.49
ATN1-204ENST00000541029 AGTPBP1Q9UPW5 1226 aa24.33■■□□□ 1.49
ATN1-204ENST00000541029 SLC45A1Q9Y2W3 748 aa24.33■■□□□ 1.49
ATN1-204ENST00000541029 DOCK3Q8IZD9 2030 aa24.32■■□□□ 1.48
ATN1-204ENST00000541029 USP17L5A8MUK1 530 aa24.32■■□□□ 1.48
ATN1-204ENST00000541029 FOXP4Q8IVH2 680 aaPredicted RBP24.32■■□□□ 1.48
ATN1-204ENST00000541029 TRIM47Q96LD4 638 aa24.32■■□□□ 1.48
ATN1-204ENST00000541029 TBC1D2Q9BYX2 928 aa24.32■■□□□ 1.48
ATN1-204ENST00000541029 BOLA2Q9H3K6 86 aa24.32■■□□□ 1.48
ATN1-204ENST00000541029 MKI67P46013 3256 aaKnown RBP24.32■■□□□ 1.48
ATN1-204ENST00000541029 ZNF532Q9HCE3 1301 aa24.32■■□□□ 1.48
ATN1-204ENST00000541029 MAGEB6P1A0A0J9YX57 407 aa24.31■■□□□ 1.48
ATN1-204ENST00000541029 PSMC4P43686 418 aa24.31■■□□□ 1.48
ATN1-204ENST00000541029 HMGCS2P54868 508 aa24.31■■□□□ 1.48
ATN1-204ENST00000541029 SLC9C1Q4G0N8 1177 aa24.31■■□□□ 1.48
ATN1-204ENST00000541029 PROCA1Q8NCQ7 364 aaPredicted RBP24.31■■□□□ 1.48
ATN1-204ENST00000541029 AS3MTQ9HBK9 375 aa24.31■■□□□ 1.48
ATN1-204ENST00000541029 PAG1Q9NWQ8 432 aa24.31■■□□□ 1.48
ATN1-204ENST00000541029 TCRBV5S4A2TA0A5A2 114 aa24.3■■□□□ 1.48
ATN1-204ENST00000541029 POTEFA5A3E0 1075 aa24.3■■□□□ 1.48
ATN1-204ENST00000541029 GNRH1P01148 92 aa24.3■■□□□ 1.48
ATN1-204ENST00000541029 ASNSP08243 561 aa24.3■■□□□ 1.48
ATN1-204ENST00000541029 ATP5JP18859 108 aa24.3■■□□□ 1.48
ATN1-204ENST00000541029 SMCR8Q8TEV9 937 aaPredicted RBP24.3■■□□□ 1.48
ATN1-204ENST00000541029 ZNF333Q96JL9 665 aa24.3■■□□□ 1.48
ATN1-204ENST00000541029 ZBTB21Q9ULJ3 1066 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms