RNA–Protein interactions for RNA: ENST00000540849.5

PRICKLE3-205, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 2

Gene PRICKLE3, Length 2,246 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-205ENST00000540849 MYO1BO43795 1136 aa15.27■□□□□ 0.03
PRICKLE3-205ENST00000540849 PRR29P0C7W0 189 aa15.27■□□□□ 0.03
PRICKLE3-205ENST00000540849 DIS3L2Q8IYB7 885 aaKnown RBP15.27■□□□□ 0.03
PRICKLE3-205ENST00000540849 WASF1Q92558 559 aa15.27■□□□□ 0.03
PRICKLE3-205ENST00000540849 FAM53CQ9NYF3 392 aa15.27■□□□□ 0.03
PRICKLE3-205ENST00000540849 FBXO2Q9UK22 296 aaPredicted RBP15.27■□□□□ 0.03
PRICKLE3-205ENST00000540849 MAN1B1Q9UKM7 699 aa15.27■□□□□ 0.03
PRICKLE3-205ENST00000540849 PHLPP2Q6ZVD8 1323 aa15.26■□□□□ 0.03
PRICKLE3-205ENST00000540849 NPHP1O15259 732 aa15.26■□□□□ 0.03
PRICKLE3-205ENST00000540849 TOP1P11387 765 aaKnown RBP15.26■□□□□ 0.03
PRICKLE3-205ENST00000540849 SLC5A1P13866 664 aa15.26■□□□□ 0.03
PRICKLE3-205ENST00000540849 ETF1P62495 437 aaKnown RBP15.26■□□□□ 0.03
PRICKLE3-205ENST00000540849 ERCC6LQ2NKX8 1250 aa15.26■□□□□ 0.03
PRICKLE3-205ENST00000540849 TRIM65Q6PJ69 517 aa15.26■□□□□ 0.03
PRICKLE3-205ENST00000540849 HOMER1Q86YM7 354 aa15.26■□□□□ 0.03
PRICKLE3-205ENST00000540849 TMEM139Q8IV31 216 aa15.26■□□□□ 0.03
PRICKLE3-205ENST00000540849 ZKSCAN3Q9BRR0 538 aa15.26■□□□□ 0.03
PRICKLE3-205ENST00000540849 CNNM2Q9H8M5 875 aa15.26■□□□□ 0.03
PRICKLE3-205ENST00000540849 DNAI1Q9UI46 699 aa15.26■□□□□ 0.03
PRICKLE3-205ENST00000540849 BCL9O00512 1426 aa15.26■□□□□ 0.03
PRICKLE3-205ENST00000540849 PLCH1Q4KWH8 1693 aa15.26■□□□□ 0.03
PRICKLE3-205ENST00000540849 FANCGO15287 622 aa15.25■□□□□ 0.03
PRICKLE3-205ENST00000540849 GABPB1Q06547 395 aaPredicted RBP15.25■□□□□ 0.03
PRICKLE3-205ENST00000540849 MAP3K12Q12852 859 aa15.25■□□□□ 0.03
PRICKLE3-205ENST00000540849 RTN1Q16799 776 aa15.25■□□□□ 0.03
PRICKLE3-205ENST00000540849 RRP12Q5JTH9 1297 aaKnown RBP15.25■□□□□ 0.03
PRICKLE3-205ENST00000540849 REXO1L1PQ8IX06 675 aa15.25■□□□□ 0.03
PRICKLE3-205ENST00000540849 ELOA2Q8IYF1 753 aaPredicted RBP15.25■□□□□ 0.03
PRICKLE3-205ENST00000540849 LCORLQ8N3X6 602 aa15.25■□□□□ 0.03
PRICKLE3-205ENST00000540849 STAG1Q8WVM7 1258 aa15.25■□□□□ 0.03
PRICKLE3-205ENST00000540849 KRT23Q9C075 422 aa15.25■□□□□ 0.03
PRICKLE3-205ENST00000540849 ZNF446Q9NWS9 450 aa15.25■□□□□ 0.03
PRICKLE3-205ENST00000540849 H2AFXP16104 143 aaPredicted RBP15.25■□□□□ 0.03
PRICKLE3-205ENST00000540849 SAFBQ15424 915 aaKnown RBP eCLIP15.25■□□□□ 0.03
PRICKLE3-205ENST00000540849 MFSD6Q6ZSS7 791 aa15.25■□□□□ 0.03
PRICKLE3-205ENST00000540849 KRT222Q8N1A0 295 aa15.25■□□□□ 0.03
PRICKLE3-205ENST00000540849 HOOK1Q9UJC3 728 aaKnown RBP15.25■□□□□ 0.03
PRICKLE3-205ENST00000540849 PTPREP23469 700 aa15.24■□□□□ 0.03
PRICKLE3-205ENST00000540849 FMR1Q06787 632 aaKnown RBP eCLIP15.24■□□□□ 0.034e-6■■■■□ 21.6
PRICKLE3-205ENST00000540849 POSTNQ15063 836 aa15.24■□□□□ 0.03
PRICKLE3-205ENST00000540849 HSP90AA4PQ58FG1 418 aa15.24■□□□□ 0.03
PRICKLE3-205ENST00000540849 DZIP3Q86Y13 1208 aaKnown RBP15.24■□□□□ 0.03
PRICKLE3-205ENST00000540849 ZNF34Q8IZ26 560 aa15.24■□□□□ 0.03
PRICKLE3-205ENST00000540849 UTP14AQ9BVJ6 771 aaKnown RBP15.24■□□□□ 0.03
PRICKLE3-205ENST00000540849 SERTAD1Q9UHV2 236 aa15.24■□□□□ 0.03
PRICKLE3-205ENST00000540849 ERVV-1B6SEH8 477 aa15.24■□□□□ 0.03
PRICKLE3-205ENST00000540849 TDO2P48775 406 aa15.24■□□□□ 0.03
PRICKLE3-205ENST00000540849 TBX2Q13207 712 aaPredicted RBP15.24■□□□□ 0.03
PRICKLE3-205ENST00000540849 WTAPQ15007 396 aa15.24■□□□□ 0.03
PRICKLE3-205ENST00000540849 GRAMD1CQ8IYS0 662 aa15.24■□□□□ 0.03
PRICKLE3-205ENST00000540849 CMTR1Q8N1G2 835 aaKnown RBP15.24■□□□□ 0.03
PRICKLE3-205ENST00000540849 SLAIN2Q9P270 581 aa15.24■□□□□ 0.03
PRICKLE3-205ENST00000540849 PCDHB6Q9Y5E3 794 aa15.24■□□□□ 0.03
PRICKLE3-205ENST00000540849 DISP2A7MBM2 1401 aa15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 POLR2DO15514 142 aaKnown RBP15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 KIF20AO95235 890 aa15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 NR5A1Q13285 461 aa15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 ZNF827Q17R98 1081 aa15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 FCHSD1Q86WN1 690 aa15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 TRIM22Q8IYM9 498 aa15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 CCDC82Q8N4S0 544 aa15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 FOXP1Q9H334 677 aaPredicted RBP15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 TOMM22Q9NS69 142 aa15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 SLC4A4Q9Y6R1 1079 aa15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 PNPLA7Q6ZV29 1317 aa15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 VWA3AA6NCI4 1184 aa15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 SARSP49591 514 aaKnown RBP15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 SART3Q15020 963 aaKnown RBP15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 RILPL1Q5EBL4 403 aa15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 NT5DC1Q5TFE4 455 aa15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 TRMT44Q8IYL2 757 aaKnown RBP15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 OXER1Q8TDS5 423 aa15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 NACAP1Q9BZK3 213 aa15.23■□□□□ 0.03
PRICKLE3-205ENST00000540849 STRCQ7RTU9 1775 aa15.22■□□□□ 0.03
PRICKLE3-205ENST00000540849 DEXIO95424 95 aa15.22■□□□□ 0.03
PRICKLE3-205ENST00000540849 ZNF18P17022 549 aa15.22■□□□□ 0.03
PRICKLE3-205ENST00000540849 GNAT2P19087 354 aa15.22■□□□□ 0.03
PRICKLE3-205ENST00000540849 MORC3Q14149 939 aa15.22■□□□□ 0.03
PRICKLE3-205ENST00000540849 CRACR2BQ8N4Y2 399 aaPredicted RBP15.22■□□□□ 0.03
PRICKLE3-205ENST00000540849 AK7Q96M32 723 aa15.22■□□□□ 0.03
PRICKLE3-205ENST00000540849 SEC31BQ9NQW1 1179 aa15.22■□□□□ 0.03
PRICKLE3-205ENST00000540849 NFE2L3Q9Y4A8 694 aa15.22■□□□□ 0.03
PRICKLE3-205ENST00000540849 PHLPP1O60346 1717 aa15.22■□□□□ 0.03
PRICKLE3-205ENST00000540849 ARHGAP6O43182 974 aa15.21■□□□□ 0.03
PRICKLE3-205ENST00000540849 ACTN4O43707 911 aaKnown RBP15.21■□□□□ 0.03
PRICKLE3-205ENST00000540849 SLFN14P0C7P3 912 aa15.21■□□□□ 0.03
PRICKLE3-205ENST00000540849 SUSD4Q5VX71 490 aa15.21■□□□□ 0.03
PRICKLE3-205ENST00000540849 MIGA1Q8NAN2 632 aa15.21■□□□□ 0.03
PRICKLE3-205ENST00000540849 SMARCE1Q969G3 411 aa15.21■□□□□ 0.03
PRICKLE3-205ENST00000540849 SHISA4Q96DD7 197 aa15.21■□□□□ 0.03
PRICKLE3-205ENST00000540849 MED15Q96RN5 788 aa15.21■□□□□ 0.03
PRICKLE3-205ENST00000540849 PPP2R2CQ9Y2T4 447 aa15.21■□□□□ 0.03
PRICKLE3-205ENST00000540849 ERICH2A1L162 156 aa15.21■□□□□ 0.03
PRICKLE3-205ENST00000540849 IL6STP40189 918 aaPredicted RBP15.21■□□□□ 0.03
PRICKLE3-205ENST00000540849 BCAMP50895 628 aa15.21■□□□□ 0.03
PRICKLE3-205ENST00000540849 CLCN6P51797 869 aa15.21■□□□□ 0.03
PRICKLE3-205ENST00000540849 ARHGAP29Q52LW3 1261 aa15.21■□□□□ 0.03
PRICKLE3-205ENST00000540849 USP49Q70CQ1 688 aa15.21■□□□□ 0.03
PRICKLE3-205ENST00000540849 ZNF654Q8IZM8 581 aa15.21■□□□□ 0.03
PRICKLE3-205ENST00000540849 ENOX1Q8TC92 643 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms