RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 MRS2Q9HD23 443 aa6.57□□□□□ -1.36
MDM2-227ENST00000540709 CACNA2D2Q9NY47 1150 aa6.57□□□□□ -1.36
MDM2-227ENST00000540709 SLC5A6Q9Y289 635 aa6.57□□□□□ -1.36
MDM2-227ENST00000540709 ANKRD24Q8TF21 1146 aa6.56□□□□□ -1.36
MDM2-227ENST00000540709 PRDM10Q9NQV6 1147 aa6.56□□□□□ -1.36
MDM2-227ENST00000540709 PRNPP04156 253 aa6.55□□□□□ -1.36
MDM2-227ENST00000540709 LIG3P49916 1009 aa6.55□□□□□ -1.36
MDM2-227ENST00000540709 DAB2P98082 770 aa6.55□□□□□ -1.36
MDM2-227ENST00000540709 PLCL1Q15111 1095 aa6.55□□□□□ -1.36
MDM2-227ENST00000540709 TAF1CQ15572 869 aaPredicted RBP6.55□□□□□ -1.36
MDM2-227ENST00000540709 KCT2Q8NC54 265 aa6.55□□□□□ -1.36
MDM2-227ENST00000540709 XAGE3Q8WTP9 111 aa6.55□□□□□ -1.36
MDM2-227ENST00000540709 MIR1-1HGQ9H1L0 117 aa6.55□□□□□ -1.36
MDM2-227ENST00000540709 VTI1BQ9UEU0 232 aa6.55□□□□□ -1.36
MDM2-227ENST00000540709 TLR6Q9Y2C9 796 aa6.55□□□□□ -1.36
MDM2-227ENST00000540709 U3KQE9 123 aa6.55□□□□□ -1.36
MDM2-227ENST00000540709 SORBS3O60504 671 aa6.54□□□□□ -1.36
MDM2-227ENST00000540709 NTF4P34130 210 aa6.54□□□□□ -1.36
MDM2-227ENST00000540709 CD96P40200 585 aa6.54□□□□□ -1.36
MDM2-227ENST00000540709 AOC3Q16853 763 aa6.54□□□□□ -1.36
MDM2-227ENST00000540709 ARMCX6Q7L4S7 300 aa6.54□□□□□ -1.36
MDM2-227ENST00000540709 SPRED2Q7Z698 418 aa6.54□□□□□ -1.36
MDM2-227ENST00000540709 BCL7CQ8WUZ0 217 aaPredicted RBP6.54□□□□□ -1.36
MDM2-227ENST00000540709 GAL3ST3Q96A11 431 aa6.54□□□□□ -1.36
MDM2-227ENST00000540709 PAK6Q9NQU5 681 aaPredicted RBP6.54□□□□□ -1.36
MDM2-227ENST00000540709 GTF2IRD1Q9UHL9 959 aa6.54□□□□□ -1.36
MDM2-227ENST00000540709 ADGRE2Q9UHX3 823 aa6.54□□□□□ -1.36
MDM2-227ENST00000540709 TPX2Q9ULW0 747 aaKnown RBP6.54□□□□□ -1.36
MDM2-227ENST00000540709 COL17A1Q9UMD9 1497 aaPredicted RBP6.53□□□□□ -1.36
MDM2-227ENST00000540709 GRK4P32298 578 aa6.53□□□□□ -1.36
MDM2-227ENST00000540709 RING1Q06587 406 aa6.53□□□□□ -1.36
MDM2-227ENST00000540709 IFI16Q16666 785 aaKnown RBP6.53□□□□□ -1.36
MDM2-227ENST00000540709 SCARA3Q6AZY7 606 aa6.53□□□□□ -1.36
MDM2-227ENST00000540709 NFXL1Q6ZNB6 911 aa6.53□□□□□ -1.36
MDM2-227ENST00000540709 AGMOQ6ZNB7 445 aa6.53□□□□□ -1.36
MDM2-227ENST00000540709 STK11IPQ8N1F8 1099 aa6.53□□□□□ -1.36
MDM2-227ENST00000540709 AGBL5Q8NDL9 886 aa6.53□□□□□ -1.36
MDM2-227ENST00000540709 HEXIM2Q96MH2 286 aaKnown RBP6.53□□□□□ -1.36
MDM2-227ENST00000540709 MIPEPQ99797 713 aa6.53□□□□□ -1.36
MDM2-227ENST00000540709 WNT10AQ9GZT5 417 aa6.53□□□□□ -1.36
MDM2-227ENST00000540709 FBRSQ9HAH7 460 aa6.53□□□□□ -1.36
MDM2-227ENST00000540709 SNCAIPQ9Y6H5 919 aa6.53□□□□□ -1.36
MDM2-227ENST00000540709 GNAT3A8MTJ3 354 aa6.52□□□□□ -1.37
MDM2-227ENST00000540709 PAX4O43316 350 aa6.52□□□□□ -1.37
MDM2-227ENST00000540709 CEACAM5P06731 702 aa6.52□□□□□ -1.37
MDM2-227ENST00000540709 TFE3P19532 575 aaPredicted RBP6.52□□□□□ -1.37
MDM2-227ENST00000540709 OXCT1P55809 520 aa6.52□□□□□ -1.37
MDM2-227ENST00000540709 RPS26P62854 115 aaKnown RBP6.52□□□□□ -1.37
MDM2-227ENST00000540709 NKG7Q16617 165 aa6.52□□□□□ -1.37
MDM2-227ENST00000540709 CYFIP1Q7L576 1253 aa6.52□□□□□ -1.37
MDM2-227ENST00000540709 TMC4Q7Z404 712 aa6.52□□□□□ -1.37
MDM2-227ENST00000540709 FBXO33Q7Z6M2 555 aa6.52□□□□□ -1.37
MDM2-227ENST00000540709 FOXQ1Q9C009 403 aa6.52□□□□□ -1.37
MDM2-227ENST00000540709 TMEM265A0A087WTH1 108 aa6.51□□□□□ -1.37
MDM2-227ENST00000540709 LRIG2O94898 1065 aa6.51□□□□□ -1.37
MDM2-227ENST00000540709 CTSHP09668 335 aa6.51□□□□□ -1.37
MDM2-227ENST00000540709 CD8BP10966 210 aa6.51□□□□□ -1.37
MDM2-227ENST00000540709 RLBP1P12271 317 aa6.51□□□□□ -1.37
MDM2-227ENST00000540709 DIEXFQ68CQ4 756 aaKnown RBP6.51□□□□□ -1.37
MDM2-227ENST00000540709 HID1Q8IV36 788 aa6.51□□□□□ -1.37
MDM2-227ENST00000540709 MISP3Q96FF7 219 aa6.51□□□□□ -1.37
MDM2-227ENST00000540709 HRASLS5Q96KN8 279 aa6.51□□□□□ -1.37
MDM2-227ENST00000540709 PRDM5Q9NQX1 630 aaPredicted RBP6.51□□□□□ -1.37
MDM2-227ENST00000540709 PLAGL2Q9UPG8 496 aa6.51□□□□□ -1.37
MDM2-227ENST00000540709 FAM155AB1AL88 458 aaPredicted RBP6.5□□□□□ -1.37
MDM2-227ENST00000540709 PGRP06401 933 aa6.5□□□□□ -1.37
MDM2-227ENST00000540709 RELL1Q8IUW5 271 aa6.5□□□□□ -1.37
MDM2-227ENST00000540709 DPH2Q9BQC3 489 aaPredicted RBP6.5□□□□□ -1.37
MDM2-227ENST00000540709 BCL2L13Q9BXK5 485 aa6.5□□□□□ -1.37
MDM2-227ENST00000540709 VAV3Q9UKW4 847 aa6.5□□□□□ -1.37
MDM2-227ENST00000540709 RNF114Q9Y508 228 aa6.5□□□□□ -1.37
MDM2-227ENST00000540709 USP31Q70CQ4 1352 aa6.49□□□□□ -1.37
MDM2-227ENST00000540709 MINDY4BA8MYZ0 360 aa6.49□□□□□ -1.37
MDM2-227ENST00000540709 SLITRK5O94991 958 aa6.49□□□□□ -1.37
MDM2-227ENST00000540709 CBX7O95931 251 aa6.49□□□□□ -1.37
MDM2-227ENST00000540709 EOMESO95936 686 aa6.49□□□□□ -1.37
MDM2-227ENST00000540709 GBP2P32456 591 aaPredicted RBP6.49□□□□□ -1.37
MDM2-227ENST00000540709 PRKCQQ04759 706 aa6.49□□□□□ -1.37
MDM2-227ENST00000540709 SLBPQ14493 270 aaKnown RBP eCLIP6.49□□□□□ -1.37
MDM2-227ENST00000540709 TSNAXIP1Q2TAA8 658 aa6.49□□□□□ -1.37
MDM2-227ENST00000540709 CDKAL1Q5VV42 579 aa6.49□□□□□ -1.37
MDM2-227ENST00000540709 PRAMEF13Q5VWM6 474 aa6.49□□□□□ -1.37
MDM2-227ENST00000540709 RIN3Q8TB24 985 aa6.49□□□□□ -1.37
MDM2-227ENST00000540709 PI4K2BQ8TCG2 481 aa6.49□□□□□ -1.37
MDM2-227ENST00000540709 CRELD1Q96HD1 420 aa6.49□□□□□ -1.37
MDM2-227ENST00000540709 KRTAP9-9Q9BYP9 154 aa6.49□□□□□ -1.37
MDM2-227ENST00000540709 KRTAP9-4Q9BYQ2 154 aa6.49□□□□□ -1.37
MDM2-227ENST00000540709 MKNK2Q9HBH9 465 aa6.49□□□□□ -1.37
MDM2-227ENST00000540709 GFRA2O00451 464 aa6.48□□□□□ -1.37
MDM2-227ENST00000540709 BPNT1O95861 308 aa6.48□□□□□ -1.37
MDM2-227ENST00000540709 ERCC3P19447 782 aa6.48□□□□□ -1.37
MDM2-227ENST00000540709 ST13P50502 369 aaKnown RBP6.48□□□□□ -1.37
MDM2-227ENST00000540709 FAM160A1Q05DH4 1040 aa6.48□□□□□ -1.37
MDM2-227ENST00000540709 IKZF1Q13422 519 aa6.48□□□□□ -1.37
MDM2-227ENST00000540709 ZNF792Q3KQV3 632 aa6.48□□□□□ -1.37
MDM2-227ENST00000540709 SFRP5Q5T4F7 317 aa6.48□□□□□ -1.37
MDM2-227ENST00000540709 LETMD1Q6P1Q0 360 aa6.48□□□□□ -1.37
MDM2-227ENST00000540709 BNC2Q6ZN30 1099 aaPredicted RBP6.48□□□□□ -1.37
MDM2-227ENST00000540709 FAM214BQ7L5A3 538 aa6.48□□□□□ -1.37
MDM2-227ENST00000540709 CDH24Q86UP0 819 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms