RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 FAM47AQ5JRC9 791 aa16.21■□□□□ 0.19
INO80E-203ENST00000540562 TRIM22Q8IYM9 498 aa16.21■□□□□ 0.19
INO80E-203ENST00000540562 LPIN2Q92539 896 aa16.21■□□□□ 0.19
INO80E-203ENST00000540562 PLIN2Q99541 437 aa16.21■□□□□ 0.19
INO80E-203ENST00000540562 CPDO75976 1380 aa16.21■□□□□ 0.19
INO80E-203ENST00000540562 TCRBV5S4A2TA0A5A2 114 aa16.21■□□□□ 0.19
INO80E-203ENST00000540562 FANCGO15287 622 aa16.21■□□□□ 0.19
INO80E-203ENST00000540562 SLU7O95391 586 aaKnown RBP16.21■□□□□ 0.19
INO80E-203ENST00000540562 ATL3Q6DD88 541 aa16.21■□□□□ 0.19
INO80E-203ENST00000540562 JMYQ8N9B5 988 aa16.21■□□□□ 0.19
INO80E-203ENST00000540562 KRI1Q8N9T8 703 aaKnown RBP16.21■□□□□ 0.19
INO80E-203ENST00000540562 BLZF1Q9H2G9 400 aa16.21■□□□□ 0.19
INO80E-203ENST00000540562 LZTFL1Q9NQ48 299 aa16.21■□□□□ 0.19
INO80E-203ENST00000540562 V9GY48 417 aaPredicted RBP16.21■□□□□ 0.19
INO80E-203ENST00000540562 ALS2Q96Q42 1657 aa16.21■□□□□ 0.19
INO80E-203ENST00000540562 PATL2C9JE40 543 aaKnown RBP16.2■□□□□ 0.18
INO80E-203ENST00000540562 SEC31AO94979 1220 aaKnown RBP16.2■□□□□ 0.18
INO80E-203ENST00000540562 PLEKHA8P1O95397 391 aa16.2■□□□□ 0.18
INO80E-203ENST00000540562 CARD6Q9BX69 1037 aa16.2■□□□□ 0.18
INO80E-203ENST00000540562 CSRNP2Q9H175 543 aa16.2■□□□□ 0.18
INO80E-203ENST00000540562 PES1O00541 588 aaKnown RBP16.2■□□□□ 0.18
INO80E-203ENST00000540562 VEGFAP15692 232 aaPredicted RBP16.2■□□□□ 0.18
INO80E-203ENST00000540562 UBE3CQ15386 1083 aa16.2■□□□□ 0.18
INO80E-203ENST00000540562 C3orf67Q6ZVT6 689 aa16.2■□□□□ 0.18
INO80E-203ENST00000540562 TFCP2L1Q9NZI6 479 aa16.2■□□□□ 0.18
INO80E-203ENST00000540562 EXOC5O00471 708 aa16.2■□□□□ 0.18
INO80E-203ENST00000540562 AKAP17AQ02040 695 aaKnown RBP16.2■□□□□ 0.18
INO80E-203ENST00000540562 TOGARAM2Q6ZUX3 1019 aa16.2■□□□□ 0.18
INO80E-203ENST00000540562 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.2■□□□□ 0.18
INO80E-203ENST00000540562 INTS13Q9NVM9 706 aa16.2■□□□□ 0.18
INO80E-203ENST00000540562 NRDCO43847 1150 aa16.19■□□□□ 0.18
INO80E-203ENST00000540562 KLRK1P26718 216 aa16.19■□□□□ 0.18
INO80E-203ENST00000540562 TRERF1Q96PN7 1200 aa16.19■□□□□ 0.18
INO80E-203ENST00000540562 MAN1B1Q9UKM7 699 aa16.19■□□□□ 0.18
INO80E-203ENST00000540562 POLR3GO15318 223 aaPredicted RBP16.19■□□□□ 0.18
INO80E-203ENST00000540562 NEMFO60524 1076 aa16.19■□□□□ 0.18
INO80E-203ENST00000540562 GNG11P61952 73 aa16.19■□□□□ 0.18
INO80E-203ENST00000540562 CHRNDQ07001 517 aa16.19■□□□□ 0.18
INO80E-203ENST00000540562 POSTNQ15063 836 aa16.19■□□□□ 0.18
INO80E-203ENST00000540562 NKX1-1Q15270 411 aaPredicted RBP16.19■□□□□ 0.18
INO80E-203ENST00000540562 ZNF654Q8IZM8 581 aa16.19■□□□□ 0.18
INO80E-203ENST00000540562 MNS1Q8NEH6 495 aa16.19■□□□□ 0.18
INO80E-203ENST00000540562 TNKSO95271 1327 aa16.19■□□□□ 0.18
INO80E-203ENST00000540562 ADAMTS3O15072 1205 aa16.18■□□□□ 0.18
INO80E-203ENST00000540562 CCT6AP40227 531 aaKnown RBP16.18■□□□□ 0.18
INO80E-203ENST00000540562 DMTNQ08495 405 aa16.18■□□□□ 0.18
INO80E-203ENST00000540562 FAM182BQ5T319 152 aa16.18■□□□□ 0.18
INO80E-203ENST00000540562 RESP18Q5W5W9 173 aa16.18■□□□□ 0.18
INO80E-203ENST00000540562 CGNQ9P2M7 1197 aaKnown RBP16.18■□□□□ 0.18
INO80E-203ENST00000540562 COL18A1P39060 1754 aa16.18■□□□□ 0.18
INO80E-203ENST00000540562 VWA3AA6NCI4 1184 aa16.18■□□□□ 0.18
INO80E-203ENST00000540562 TEX33O43247 280 aa16.18■□□□□ 0.18
INO80E-203ENST00000540562 IGHMBP2P38935 993 aaKnown RBP16.18■□□□□ 0.18
INO80E-203ENST00000540562 TEX35Q5T0J7 233 aa16.18■□□□□ 0.18
INO80E-203ENST00000540562 NACAP1Q9BZK3 213 aa16.18■□□□□ 0.18
INO80E-203ENST00000540562 OSBPL5Q9H0X9 879 aaPredicted RBP16.18■□□□□ 0.18
INO80E-203ENST00000540562 TJP1Q07157 1748 aa16.18■□□□□ 0.18
INO80E-203ENST00000540562 A0A087X0B3 334 aa16.17■□□□□ 0.18
INO80E-203ENST00000540562 KCNQ2O43526 872 aa16.17■□□□□ 0.18
INO80E-203ENST00000540562 MMP1P03956 469 aa16.17■□□□□ 0.18
INO80E-203ENST00000540562 SART3Q15020 963 aaKnown RBP16.17■□□□□ 0.18
INO80E-203ENST00000540562 CCDC150Q8NCX0 1101 aa16.17■□□□□ 0.18
INO80E-203ENST00000540562 SMARCE1Q969G3 411 aa16.17■□□□□ 0.18
INO80E-203ENST00000540562 SHISA4Q96DD7 197 aa16.17■□□□□ 0.18
INO80E-203ENST00000540562 WDR24Q96S15 920 aa16.17■□□□□ 0.18
INO80E-203ENST00000540562 GLI3P10071 1580 aa16.17■□□□□ 0.18
INO80E-203ENST00000540562 FANCBQ8NB91 859 aa16.17■□□□□ 0.18
INO80E-203ENST00000540562 TMEM87BQ96K49 555 aa16.17■□□□□ 0.18
INO80E-203ENST00000540562 ADAMTS7Q9UKP4 1686 aa16.17■□□□□ 0.18
INO80E-203ENST00000540562 PPARAQ07869 468 aa16.17■□□□□ 0.18
INO80E-203ENST00000540562 TRIM28Q13263 835 aaKnown RBP16.17■□□□□ 0.18
INO80E-203ENST00000540562 RASGRP4Q8TDF6 673 aa16.17■□□□□ 0.18
INO80E-203ENST00000540562 CCDC34Q96HJ3 373 aa16.17■□□□□ 0.18
INO80E-203ENST00000540562 ZNF446Q9NWS9 450 aa16.17■□□□□ 0.18
INO80E-203ENST00000540562 KIF1AQ12756 1690 aa16.17■□□□□ 0.18
INO80E-203ENST00000540562 UQCRFS1P1P0C7P4 283 aa16.16■□□□□ 0.18
INO80E-203ENST00000540562 CYP2D6P10635 497 aa16.16■□□□□ 0.18
INO80E-203ENST00000540562 CRKLP46109 303 aaKnown RBP16.16■□□□□ 0.18
INO80E-203ENST00000540562 HPSEQ9Y251 543 aa16.16■□□□□ 0.18
INO80E-203ENST00000540562 SOWAHDA6NJG2 315 aa16.16■□□□□ 0.18
INO80E-203ENST00000540562 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
INO80E-203ENST00000540562 AATFQ9NY61 560 aaKnown RBP eCLIP16.16■□□□□ 0.18
INO80E-203ENST00000540562 SOS2Q07890 1332 aaPredicted RBP16.16■□□□□ 0.18
INO80E-203ENST00000540562 FMNL1O95466 1100 aaPredicted RBP16.15■□□□□ 0.18
INO80E-203ENST00000540562 ERCC3P19447 782 aa16.15■□□□□ 0.18
INO80E-203ENST00000540562 ZNF397Q8NF99 534 aaPredicted RBP16.15■□□□□ 0.18
INO80E-203ENST00000540562 ERO1AQ96HE7 468 aa16.15■□□□□ 0.18
INO80E-203ENST00000540562 MED15Q96RN5 788 aa16.15■□□□□ 0.18
INO80E-203ENST00000540562 TEX13AQ9BXU3 409 aaPredicted RBP16.15■□□□□ 0.18
INO80E-203ENST00000540562 CUTAO60888 179 aa16.15■□□□□ 0.18
INO80E-203ENST00000540562 ARID4AP29374 1257 aaPredicted RBP16.15■□□□□ 0.18
INO80E-203ENST00000540562 MCM7P33993 719 aa16.15■□□□□ 0.18
INO80E-203ENST00000540562 CRACR2BQ8N4Y2 399 aaPredicted RBP16.15■□□□□ 0.18
INO80E-203ENST00000540562 UBXN4Q92575 508 aa16.15■□□□□ 0.18
INO80E-203ENST00000540562 BAG1Q99933 345 aaPredicted RBP16.15■□□□□ 0.18
INO80E-203ENST00000540562 PLA2G12BQ9BX93 195 aa16.15■□□□□ 0.18
INO80E-203ENST00000540562 CPVLQ9H3G5 476 aa16.15■□□□□ 0.18
INO80E-203ENST00000540562 OGFRQ9NZT2 677 aa16.15■□□□□ 0.18
INO80E-203ENST00000540562 FBXO2Q9UK22 296 aaPredicted RBP16.15■□□□□ 0.18
INO80E-203ENST00000540562 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.15■□□□□ 0.183e-6■■■□□ 16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms