RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 TGFBRAP1Q8WUH2 860 aa25.57■■□□□ 1.68
CHFR-217ENST00000540537 PI4KBQ9UBF8 816 aa25.57■■□□□ 1.68
CHFR-217ENST00000540537 ADGRA2Q96PE1 1338 aa25.57■■□□□ 1.68
CHFR-217ENST00000540537 CYP7A1P22680 504 aa25.56■■□□□ 1.68
CHFR-217ENST00000540537 LACTBP83111 547 aaPredicted RBP25.56■■□□□ 1.68
CHFR-217ENST00000540537 KIF22Q14807 665 aa25.56■■□□□ 1.68
CHFR-217ENST00000540537 C20orf194Q5TEA3 1177 aa25.56■■□□□ 1.68
CHFR-217ENST00000540537 PARK7Q99497 189 aaKnown RBP25.56■■□□□ 1.68
CHFR-217ENST00000540537 NDUFB9Q9Y6M9 179 aa25.56■■□□□ 1.68
CHFR-217ENST00000540537 FLT1P17948 1338 aa25.56■■□□□ 1.68
CHFR-217ENST00000540537 SIPA1L1O43166 1804 aa25.56■■□□□ 1.68
CHFR-217ENST00000540537 ATAD5Q96QE3 1844 aa25.56■■□□□ 1.68
CHFR-217ENST00000540537 MAP3K12Q12852 859 aa25.55■■□□□ 1.68
CHFR-217ENST00000540537 MAPKAPK5Q8IW41 473 aa25.55■■□□□ 1.68
CHFR-217ENST00000540537 ANTXR1Q9H6X2 564 aa25.55■■□□□ 1.68
CHFR-217ENST00000540537 TNRC18O15417 2968 aaPredicted RBP25.54■■□□□ 1.68
CHFR-217ENST00000540537 APBB1O00213 710 aa25.54■■□□□ 1.68
CHFR-217ENST00000540537 MAGEB6Q8N7X4 407 aa25.54■■□□□ 1.68
CHFR-217ENST00000540537 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.54■■□□□ 1.68
CHFR-217ENST00000540537 ARMC5Q96C12 935 aa25.54■■□□□ 1.68
CHFR-217ENST00000540537 CPA4Q9UI42 421 aa25.54■■□□□ 1.68
CHFR-217ENST00000540537 SLC45A1Q9Y2W3 748 aa25.54■■□□□ 1.68
CHFR-217ENST00000540537 GNRH1P01148 92 aa25.53■■□□□ 1.68
CHFR-217ENST00000540537 IFIT2P09913 472 aaKnown RBP25.53■■□□□ 1.68
CHFR-217ENST00000540537 CAP2P40123 477 aa25.53■■□□□ 1.68
CHFR-217ENST00000540537 DYNLL1P63167 89 aaKnown RBP25.53■■□□□ 1.68
CHFR-217ENST00000540537 GADL1Q6ZQY3 521 aa25.53■■□□□ 1.68
CHFR-217ENST00000540537 TBC1D2Q9BYX2 928 aa25.53■■□□□ 1.68
CHFR-217ENST00000540537 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.53■■□□□ 1.68
CHFR-217ENST00000540537 ZSWIM8A7E2V4 1837 aa25.53■■□□□ 1.68
CHFR-217ENST00000540537 CENPFP49454 3210 aa25.52■■□□□ 1.68
CHFR-217ENST00000540537 TRIM75PA6NK02 468 aa25.52■■□□□ 1.68
CHFR-217ENST00000540537 TTF1Q15361 905 aaPredicted RBP25.52■■□□□ 1.68
CHFR-217ENST00000540537 METTL16Q86W50 562 aaKnown RBP25.52■■□□□ 1.68
CHFR-217ENST00000540537 ARHGAP39Q9C0H5 1083 aa25.52■■□□□ 1.68
CHFR-217ENST00000540537 PDE4DIPQ5VU43 2346 aa25.52■■□□□ 1.68
CHFR-217ENST00000540537 RRP1BQ14684 758 aaKnown RBP25.51■■□□□ 1.67
CHFR-217ENST00000540537 CCDC84Q86UT8 332 aaPredicted RBP25.51■■□□□ 1.67
CHFR-217ENST00000540537 FOXP4Q8IVH2 680 aaPredicted RBP25.51■■□□□ 1.67
CHFR-217ENST00000540537 PTCH2Q9Y6C5 1203 aa25.51■■□□□ 1.67
CHFR-217ENST00000540537 KIAA0100Q14667 2235 aaKnown RBP25.51■■□□□ 1.67
CHFR-217ENST00000540537 CYP2C8P10632 490 aa25.5■■□□□ 1.67
CHFR-217ENST00000540537 MYH1P12882 1939 aa25.5■■□□□ 1.67
CHFR-217ENST00000540537 PRMT2P55345 433 aa25.5■■□□□ 1.67
CHFR-217ENST00000540537 MIGA1Q8NAN2 632 aa25.5■■□□□ 1.67
CHFR-217ENST00000540537 PALD1Q9ULE6 856 aa25.5■■□□□ 1.67
CHFR-217ENST00000540537 USP17L5A8MUK1 530 aa25.49■■□□□ 1.67
CHFR-217ENST00000540537 HLA-DOAP06340 250 aa25.49■■□□□ 1.67
CHFR-217ENST00000540537 BCRP11274 1271 aa25.49■■□□□ 1.67
CHFR-217ENST00000540537 ZNF280CQ8ND82 737 aa25.49■■□□□ 1.67
CHFR-217ENST00000540537 TRIM34Q9BYJ4 488 aa25.49■■□□□ 1.67
CHFR-217ENST00000540537 DNAJC18Q9H819 358 aa25.49■■□□□ 1.67
CHFR-217ENST00000540537 AGTPBP1Q9UPW5 1226 aa25.49■■□□□ 1.67
CHFR-217ENST00000540537 RBBP6Q7Z6E9 1792 aaKnown RBP25.49■■□□□ 1.67
CHFR-217ENST00000540537 CRACR2BQ8N4Y2 399 aaPredicted RBP25.48■■□□□ 1.67
CHFR-217ENST00000540537 PROCA1Q8NCQ7 364 aaPredicted RBP25.48■■□□□ 1.67
CHFR-217ENST00000540537 SAP30BPQ9UHR5 308 aaKnown RBP25.48■■□□□ 1.67
CHFR-217ENST00000540537 LOC285556D6RIA3 1793 aa25.48■■□□□ 1.67
CHFR-217ENST00000540537 PSMC4P43686 418 aa25.47■■□□□ 1.67
CHFR-217ENST00000540537 SPP2Q13103 211 aa25.47■■□□□ 1.67
CHFR-217ENST00000540537 SLC9C1Q4G0N8 1177 aa25.47■■□□□ 1.67
CHFR-217ENST00000540537 NBPF11Q86T75 865 aa25.47■■□□□ 1.67
CHFR-217ENST00000540537 AS3MTQ9HBK9 375 aa25.47■■□□□ 1.67
CHFR-217ENST00000540537 GINM1Q9NU53 330 aa25.47■■□□□ 1.67
CHFR-217ENST00000540537 ASNSP08243 561 aa25.46■■□□□ 1.67
CHFR-217ENST00000540537 CTGFP29279 349 aa25.46■■□□□ 1.67
CHFR-217ENST00000540537 USP5P45974 858 aa25.46■■□□□ 1.67
CHFR-217ENST00000540537 ZNF333Q96JL9 665 aa25.46■■□□□ 1.67
CHFR-217ENST00000540537 TRIM47Q96LD4 638 aa25.46■■□□□ 1.67
CHFR-217ENST00000540537 DNAJC2Q99543 621 aaKnown RBP25.46■■□□□ 1.67
CHFR-217ENST00000540537 GOLIM4O00461 696 aa25.45■■□□□ 1.66
CHFR-217ENST00000540537 PDE6AP16499 860 aa25.45■■□□□ 1.66
CHFR-217ENST00000540537 HOXD10P28358 340 aa25.45■■□□□ 1.66
CHFR-217ENST00000540537 SLC9C2Q5TAH2 1124 aa25.45■■□□□ 1.66
CHFR-217ENST00000540537 RIOK1Q9BRS2 568 aaKnown RBP25.45■■□□□ 1.66
CHFR-217ENST00000540537 WDR18Q9BV38 432 aa25.45■■□□□ 1.66
CHFR-217ENST00000540537 SRRDQ9UH36 339 aa25.45■■□□□ 1.66
CHFR-217ENST00000540537 PNMA3Q9UL41 463 aa25.45■■□□□ 1.66
CHFR-217ENST00000540537 MGAMO43451 1857 aa25.45■■□□□ 1.66
CHFR-217ENST00000540537 FMNL1O95466 1100 aaPredicted RBP25.44■■□□□ 1.66
CHFR-217ENST00000540537 SH3D19Q5HYK7 790 aa25.44■■□□□ 1.66
CHFR-217ENST00000540537 TREML2Q5T2D2 321 aa25.44■■□□□ 1.66
CHFR-217ENST00000540537 SMCR8Q8TEV9 937 aaPredicted RBP25.44■■□□□ 1.66
CHFR-217ENST00000540537 LRRCC1Q9C099 1032 aa25.44■■□□□ 1.66
CHFR-217ENST00000540537 BCL11AQ9H165 835 aa25.44■■□□□ 1.66
CHFR-217ENST00000540537 MAGEB6P1A0A0J9YX57 407 aa25.43■■□□□ 1.66
CHFR-217ENST00000540537 POTEFA5A3E0 1075 aa25.43■■□□□ 1.66
CHFR-217ENST00000540537 ATP5JP18859 108 aa25.43■■□□□ 1.66
CHFR-217ENST00000540537 OSBPP22059 807 aa25.43■■□□□ 1.66
CHFR-217ENST00000540537 HMGCS2P54868 508 aa25.43■■□□□ 1.66
CHFR-217ENST00000540537 EHD4Q9H223 541 aa25.43■■□□□ 1.66
CHFR-217ENST00000540537 ECM2O94769 699 aaPredicted RBP25.42■■□□□ 1.66
CHFR-217ENST00000540537 FCGRTP55899 365 aa25.42■■□□□ 1.66
CHFR-217ENST00000540537 PABPC4Q13310 644 aaKnown RBP eCLIP25.42■■□□□ 1.66
CHFR-217ENST00000540537 DDX60LQ5H9U9 1706 aaKnown RBP25.42■■□□□ 1.66
CHFR-217ENST00000540537 ZNF532Q9HCE3 1301 aa25.41■■□□□ 1.66
CHFR-217ENST00000540537 TCRBV5S4A2TA0A5A2 114 aa25.41■■□□□ 1.66
CHFR-217ENST00000540537 GDF11O95390 407 aa25.41■■□□□ 1.66
CHFR-217ENST00000540537 JAG1P78504 1218 aa25.41■■□□□ 1.66
CHFR-217ENST00000540537 SLC4A8Q2Y0W8 1093 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms