RNA–Protein interactions for RNA: ENST00000540351.1

UBC-207, Transcript of ubiquitin C, humanhuman

TSL 1 (best)

Gene UBC, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-207ENST00000540351 LHX8Q68G74 356 aa16.16■□□□□ 0.18
UBC-207ENST00000540351 POTEEQ6S8J3 1075 aa16.16■□□□□ 0.18
UBC-207ENST00000540351 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.16■□□□□ 0.18
UBC-207ENST00000540351 USP6NLQ92738 828 aa16.16■□□□□ 0.18
UBC-207ENST00000540351 HMX1Q9NP08 348 aaPredicted RBP16.16■□□□□ 0.18
UBC-207ENST00000540351 SH3D19Q5HYK7 790 aa16.15■□□□□ 0.18
UBC-207ENST00000540351 UBE2OQ9C0C9 1292 aaKnown RBP16.15■□□□□ 0.18
UBC-207ENST00000540351 SEMA3EO15041 775 aa16.14■□□□□ 0.17
UBC-207ENST00000540351 NPM3O75607 178 aaKnown RBP16.14■□□□□ 0.17
UBC-207ENST00000540351 GCLCP48506 637 aaPredicted RBP16.14■□□□□ 0.17
UBC-207ENST00000540351 LRRC26Q2I0M4 334 aa16.14■□□□□ 0.17
UBC-207ENST00000540351 MRPL50Q8N5N7 158 aaKnown RBP16.14■□□□□ 0.17
UBC-207ENST00000540351 ASCC2Q9H1I8 757 aaPredicted RBP16.14■□□□□ 0.17
UBC-207ENST00000540351 TAOK2Q9UL54 1235 aa16.14■□□□□ 0.17
UBC-207ENST00000540351 SIPA1L1O43166 1804 aa16.14■□□□□ 0.17
UBC-207ENST00000540351 ATAD5Q96QE3 1844 aa16.14■□□□□ 0.17
UBC-207ENST00000540351 FAM196BA6NMK8 535 aa16.13■□□□□ 0.17
UBC-207ENST00000540351 PEX10O60683 326 aa16.13■□□□□ 0.17
UBC-207ENST00000540351 XRCC5P13010 732 aaKnown RBP16.13■□□□□ 0.17
UBC-207ENST00000540351 SPP2Q13103 211 aa16.13■□□□□ 0.17
UBC-207ENST00000540351 TXNRD2Q9NNW7 524 aa16.13■□□□□ 0.17
UBC-207ENST00000540351 PNMA3Q9UL41 463 aa16.13■□□□□ 0.17
UBC-207ENST00000540351 LRRFIP2Q9Y608 721 aaKnown RBP16.13■□□□□ 0.17
UBC-207ENST00000540351 PDS5AQ29RF7 1337 aaKnown RBP16.13■□□□□ 0.17
UBC-207ENST00000540351 MAST2Q6P0Q8 1798 aa16.13■□□□□ 0.17
UBC-207ENST00000540351 FRMPD3Q5JV73 1810 aa16.12■□□□□ 0.17
UBC-207ENST00000540351 GPR75-ASB3A0A0A6YYF3 556 aa16.12■□□□□ 0.17
UBC-207ENST00000540351 CIAO1O76071 339 aa16.12■□□□□ 0.17
UBC-207ENST00000540351 ADORA1P30542 326 aa16.12■□□□□ 0.17
UBC-207ENST00000540351 JAG1P78504 1218 aa16.12■□□□□ 0.17
UBC-207ENST00000540351 ATP2B3Q16720 1220 aa16.12■□□□□ 0.17
UBC-207ENST00000540351 ZNF280CQ8ND82 737 aa16.12■□□□□ 0.17
UBC-207ENST00000540351 DENND2AQ9ULE3 1009 aa16.12■□□□□ 0.17
UBC-207ENST00000540351 ZNF521Q96K83 1311 aa16.12■□□□□ 0.17
UBC-207ENST00000540351 PRKAR2AP13861 404 aaKnown RBP16.11■□□□□ 0.17
UBC-207ENST00000540351 HMGCS2P54868 508 aa16.11■□□□□ 0.17
UBC-207ENST00000540351 CACNB2Q08289 660 aaPredicted RBP16.11■□□□□ 0.17
UBC-207ENST00000540351 RASGRF1Q13972 1273 aa16.11■□□□□ 0.17
UBC-207ENST00000540351 OSBPL5Q9H0X9 879 aaPredicted RBP16.11■□□□□ 0.17
UBC-207ENST00000540351 FBXO3Q9UK99 471 aa16.11■□□□□ 0.17
UBC-207ENST00000540351 SALL2Q9Y467 1007 aaPredicted RBP16.11■□□□□ 0.17
UBC-207ENST00000540351 LTBP2Q14767 1821 aa16.1■□□□□ 0.17
UBC-207ENST00000540351 IGHA2P01877 340 aa16.1■□□□□ 0.17
UBC-207ENST00000540351 HOXA7P31268 230 aaPredicted RBP16.1■□□□□ 0.17
UBC-207ENST00000540351 CAP2P40123 477 aa16.1■□□□□ 0.17
UBC-207ENST00000540351 BTDP43251 543 aa16.1■□□□□ 0.17
UBC-207ENST00000540351 CCDC102BQ68D86 513 aa16.1■□□□□ 0.17
UBC-207ENST00000540351 MROH7-TTC4A0A0A0MT08 1334 aa16.1■□□□□ 0.17
UBC-207ENST00000540351 CCND3P30281 292 aaPredicted RBP16.09■□□□□ 0.17
UBC-207ENST00000540351 ZEB1P37275 1124 aaPredicted RBP16.09■□□□□ 0.17
UBC-207ENST00000540351 MDM2Q00987 491 aaPredicted RBP16.09■□□□□ 0.17
UBC-207ENST00000540351 MORN1Q5T089 497 aa16.09■□□□□ 0.17
UBC-207ENST00000540351 ZSCAN29Q8IWY8 852 aaPredicted RBP16.09■□□□□ 0.17
UBC-207ENST00000540351 RBPJLQ9UBG7 517 aa16.09■□□□□ 0.17
UBC-207ENST00000540351 CYP2B6P20813 491 aa16.08■□□□□ 0.16
UBC-207ENST00000540351 PICALMQ13492 652 aa16.08■□□□□ 0.16
UBC-207ENST00000540351 CCL14Q16627 93 aa16.08■□□□□ 0.16
UBC-207ENST00000540351 Q3C1V9 767 aa16.08■□□□□ 0.16
UBC-207ENST00000540351 P2RX7Q99572 595 aaKnown RBP16.08■□□□□ 0.16
UBC-207ENST00000540351 WDR18Q9BV38 432 aa16.08■□□□□ 0.16
UBC-207ENST00000540351 TBC1D2Q9BYX2 928 aa16.08■□□□□ 0.16
UBC-207ENST00000540351 GNL3LQ9NVN8 582 aaKnown RBP16.08■□□□□ 0.16
UBC-207ENST00000540351 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.08■□□□□ 0.16
UBC-207ENST00000540351 PTPRCP08575 1304 aa16.08■□□□□ 0.16
UBC-207ENST00000540351 MECOMQ03112 1051 aa16.07■□□□□ 0.16
UBC-207ENST00000540351 SHROOM1Q2M3G4 852 aaPredicted RBP16.07■□□□□ 0.16
UBC-207ENST00000540351 METTL16Q86W50 562 aaKnown RBP16.07■□□□□ 0.16
UBC-207ENST00000540351 PORCNQ9H237 461 aa16.07■□□□□ 0.16
UBC-207ENST00000540351 DNAJC18Q9H819 358 aa16.07■□□□□ 0.16
UBC-207ENST00000540351 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.07■□□□□ 0.16
UBC-207ENST00000540351 USP17L5A8MUK1 530 aa16.06■□□□□ 0.16
UBC-207ENST00000540351 ZGPATQ8N5A5 531 aaKnown RBP16.06■□□□□ 0.16
UBC-207ENST00000540351 SOCS4Q8WXH5 440 aa16.06■□□□□ 0.16
UBC-207ENST00000540351 NUDT12Q9BQG2 462 aa16.06■□□□□ 0.16
UBC-207ENST00000540351 SIL1Q9H173 461 aa16.06■□□□□ 0.16
UBC-207ENST00000540351 PRDM6Q9NQX0 595 aa16.06■□□□□ 0.16
UBC-207ENST00000540351 CEP126Q9P2H0 1117 aa16.06■□□□□ 0.16
UBC-207ENST00000540351 BACE1P56817 501 aa16.05■□□□□ 0.16
UBC-207ENST00000540351 HERVK_113P62684 666 aa16.05■□□□□ 0.16
UBC-207ENST00000540351 PABPC4Q13310 644 aaKnown RBP eCLIP16.05■□□□□ 0.16
UBC-207ENST00000540351 SSH1Q8WYL5 1049 aa16.05■□□□□ 0.16
UBC-207ENST00000540351 NSUN4Q96CB9 384 aaKnown RBP16.05■□□□□ 0.16
UBC-207ENST00000540351 FAM161BQ96MY7 647 aa16.05■□□□□ 0.16
UBC-207ENST00000540351 CDX2Q99626 313 aaPredicted RBP16.05■□□□□ 0.16
UBC-207ENST00000540351 PA2G4Q9UQ80 394 aaKnown RBP16.05■□□□□ 0.16
UBC-207ENST00000540351 RLFQ13129 1914 aa16.05■□□□□ 0.16
UBC-207ENST00000540351 MAP4K4O95819 1239 aaPredicted RBP16.04■□□□□ 0.16
UBC-207ENST00000540351 IL15P40933 162 aaPredicted RBP16.04■□□□□ 0.16
UBC-207ENST00000540351 TIMM10P62072 90 aa16.04■□□□□ 0.16
UBC-207ENST00000540351 DZIP1Q86YF9 867 aaKnown RBP16.04■□□□□ 0.16
UBC-207ENST00000540351 TTYH1Q9H313 450 aaPredicted RBP16.04■□□□□ 0.16
UBC-207ENST00000540351 COPRSQ9NQ92 184 aa16.04■□□□□ 0.16
UBC-207ENST00000540351 FLRT1Q9NZU1 646 aa16.04■□□□□ 0.16
UBC-207ENST00000540351 CNMDO75829 334 aa16.03■□□□□ 0.16
UBC-207ENST00000540351 ERVK-9P63128 1117 aa16.03■□□□□ 0.16
UBC-207ENST00000540351 ERVK-24P63145 666 aa16.03■□□□□ 0.16
UBC-207ENST00000540351 MTMR2Q13614 643 aa16.03■□□□□ 0.16
UBC-207ENST00000540351 GPR142Q7Z601 462 aa16.03■□□□□ 0.16
UBC-207ENST00000540351 TRMT44Q8IYL2 757 aaKnown RBP16.03■□□□□ 0.16
UBC-207ENST00000540351 GPRC5AQ8NFJ5 357 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms