RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 TRIM22Q8IYM9 498 aa20■□□□□ 0.79
LTBR-207ENST00000539925 TNKSO95271 1327 aa20■□□□□ 0.79
LTBR-207ENST00000539925 COL11A2P13942 1736 aaPredicted RBP19.99■□□□□ 0.79
LTBR-207ENST00000539925 DDAH1O94760 285 aa19.99■□□□□ 0.79
LTBR-207ENST00000539925 BTDP43251 543 aa19.99■□□□□ 0.79
LTBR-207ENST00000539925 GTF2IP78347 998 aa19.99■□□□□ 0.79
LTBR-207ENST00000539925 SSRP1Q08945 709 aaKnown RBP19.99■□□□□ 0.79
LTBR-207ENST00000539925 CATIPQ7Z7H3 387 aa19.99■□□□□ 0.79
LTBR-207ENST00000539925 CHAMP1Q96JM3 812 aa19.99■□□□□ 0.79
LTBR-207ENST00000539925 SPATA32Q96LK8 384 aa19.99■□□□□ 0.79
LTBR-207ENST00000539925 GDPD2Q9HCC8 539 aa19.99■□□□□ 0.79
LTBR-207ENST00000539925 INCENPQ9NQS7 918 aa19.99■□□□□ 0.79
LTBR-207ENST00000539925 RBM28Q9NW13 759 aaKnown RBP19.99■□□□□ 0.79
LTBR-207ENST00000539925 LAMB1P07942 1786 aa19.98■□□□□ 0.79
LTBR-207ENST00000539925 TRIM29Q14134 588 aa19.98■□□□□ 0.79
LTBR-207ENST00000539925 IFIT1BQ5T764 474 aaKnown RBP19.98■□□□□ 0.79
LTBR-207ENST00000539925 ZNF654Q8IZM8 581 aa19.98■□□□□ 0.79
LTBR-207ENST00000539925 SH3RF3Q8TEJ3 882 aaPredicted RBP19.98■□□□□ 0.79
LTBR-207ENST00000539925 GOLGA6L4A6NEF3 574 aa19.97■□□□□ 0.79
LTBR-207ENST00000539925 ADD1P35611 737 aaKnown RBP19.97■□□□□ 0.79
LTBR-207ENST00000539925 DIXDC1Q155Q3 683 aa19.97■□□□□ 0.79
LTBR-207ENST00000539925 MRIQ9BWK5 157 aa19.97■□□□□ 0.79
LTBR-207ENST00000539925 RIMBP2O15034 1052 aa19.97■□□□□ 0.79
LTBR-207ENST00000539925 FMNL1O95466 1100 aaPredicted RBP19.97■□□□□ 0.79
LTBR-207ENST00000539925 NTRK3Q16288 839 aa19.97■□□□□ 0.79
LTBR-207ENST00000539925 CCDC183Q5T5S1 534 aa19.97■□□□□ 0.79
LTBR-207ENST00000539925 SLC51AQ86UW1 340 aa19.97■□□□□ 0.79
LTBR-207ENST00000539925 TEX11Q8IYF3 940 aa19.97■□□□□ 0.79
LTBR-207ENST00000539925 FANCBQ8NB91 859 aa19.97■□□□□ 0.79
LTBR-207ENST00000539925 TCHHQ07283 1943 aa19.96■□□□□ 0.79
LTBR-207ENST00000539925 ENAHQ8N8S7 591 aaPredicted RBP19.96■□□□□ 0.79
LTBR-207ENST00000539925 ALG1Q9BT22 464 aa19.96■□□□□ 0.79
LTBR-207ENST00000539925 BAZ2AQ9UIF9 1905 aaKnown RBP19.95■□□□□ 0.79
LTBR-207ENST00000539925 MYH2Q9UKX2 1941 aa19.95■□□□□ 0.79
LTBR-207ENST00000539925 POLR3DP05423 398 aaPredicted RBP19.95■□□□□ 0.78
LTBR-207ENST00000539925 CDC27P30260 824 aa19.95■□□□□ 0.78
LTBR-207ENST00000539925 GRIK5Q16478 980 aa19.95■□□□□ 0.78
LTBR-207ENST00000539925 HHIPL2Q6UWX4 724 aa19.95■□□□□ 0.78
LTBR-207ENST00000539925 NKX2-3Q8TAU0 364 aa19.95■□□□□ 0.78
LTBR-207ENST00000539925 TGFBRAP1Q8WUH2 860 aa19.95■□□□□ 0.78
LTBR-207ENST00000539925 LEO1Q8WVC0 666 aaPredicted RBP19.95■□□□□ 0.78
LTBR-207ENST00000539925 SENP2Q9HC62 589 aa19.95■□□□□ 0.78
LTBR-207ENST00000539925 FAM217BQ9NTX9 383 aaPredicted RBP19.95■□□□□ 0.78
LTBR-207ENST00000539925 TCP11L1Q9NUJ3 509 aa19.95■□□□□ 0.78
LTBR-207ENST00000539925 TMEM63CQ9P1W3 806 aa19.95■□□□□ 0.78
LTBR-207ENST00000539925 TAOK2Q9UL54 1235 aa19.95■□□□□ 0.78
LTBR-207ENST00000539925 CYP2D7A0A087X1C5 515 aa19.94■□□□□ 0.78
LTBR-207ENST00000539925 TSPY2A6NKD2 308 aa19.94■□□□□ 0.78
LTBR-207ENST00000539925 GADD45BO75293 160 aaPredicted RBP19.94■□□□□ 0.78
LTBR-207ENST00000539925 HDLBPQ00341 1268 aaKnown RBP19.94■□□□□ 0.78
LTBR-207ENST00000539925 TTC6Q86TZ1 520 aa19.94■□□□□ 0.78
LTBR-207ENST00000539925 DGKHQ86XP1 1220 aa19.94■□□□□ 0.78
LTBR-207ENST00000539925 ANKS1AQ92625 1134 aa19.94■□□□□ 0.78
LTBR-207ENST00000539925 MAP3K14Q99558 947 aa19.94■□□□□ 0.78
LTBR-207ENST00000539925 ZKSCAN3Q9BRR0 538 aa19.94■□□□□ 0.78
LTBR-207ENST00000539925 GRPEL1Q9HAV7 217 aa19.94■□□□□ 0.78
LTBR-207ENST00000539925 C10orf71Q711Q0 1435 aa19.94■□□□□ 0.78
LTBR-207ENST00000539925 DEXIO95424 95 aa19.94■□□□□ 0.78
LTBR-207ENST00000539925 STRIP1Q5VSL9 837 aa19.94■□□□□ 0.78
LTBR-207ENST00000539925 LRSAM1Q6UWE0 723 aa19.94■□□□□ 0.78
LTBR-207ENST00000539925 C7orf43Q8WVR3 580 aa19.94■□□□□ 0.78
LTBR-207ENST00000539925 RNF26Q9BY78 433 aaPredicted RBP19.94■□□□□ 0.78
LTBR-207ENST00000539925 MKNK2Q9HBH9 465 aa19.94■□□□□ 0.78
LTBR-207ENST00000539925 RCOR1Q9UKL0 485 aa19.94■□□□□ 0.78
LTBR-207ENST00000539925 DTNBO60941 627 aa19.93■□□□□ 0.78
LTBR-207ENST00000539925 USP17L8P0C7I0 530 aa19.93■□□□□ 0.78
LTBR-207ENST00000539925 XBP1P17861 261 aa19.93■□□□□ 0.78
LTBR-207ENST00000539925 RHBDL3P58872 404 aa19.93■□□□□ 0.78
LTBR-207ENST00000539925 AKAP17AQ02040 695 aaKnown RBP19.93■□□□□ 0.78
LTBR-207ENST00000539925 ZNF444Q8N0Y2 327 aaPredicted RBP19.93■□□□□ 0.78
LTBR-207ENST00000539925 RBM27Q9P2N5 1060 aaKnown RBP19.93■□□□□ 0.78
LTBR-207ENST00000539925 DAGLAQ9Y4D2 1042 aa19.93■□□□□ 0.78
LTBR-207ENST00000539925 SAFBQ15424 915 aaKnown RBP eCLIP19.92■□□□□ 0.78
LTBR-207ENST00000539925 RAB11FIP4Q86YS3 637 aa19.92■□□□□ 0.78
LTBR-207ENST00000539925 STK11IPQ8N1F8 1099 aa19.92■□□□□ 0.78
LTBR-207ENST00000539925 CRACR2BQ8N4Y2 399 aaPredicted RBP19.92■□□□□ 0.78
LTBR-207ENST00000539925 NUP133Q8WUM0 1156 aa19.92■□□□□ 0.78
LTBR-207ENST00000539925 TEKT1Q969V4 418 aa19.92■□□□□ 0.78
LTBR-207ENST00000539925 SLC26A6Q9BXS9 759 aa19.92■□□□□ 0.78
LTBR-207ENST00000539925 PRDM1O75626 825 aa19.91■□□□□ 0.78
LTBR-207ENST00000539925 KIF5BP33176 963 aa19.91■□□□□ 0.78
LTBR-207ENST00000539925 RTKN2Q8IZC4 609 aa19.91■□□□□ 0.78
LTBR-207ENST00000539925 CTCFLQ8NI51 663 aaPredicted RBP19.91■□□□□ 0.78
LTBR-207ENST00000539925 MYL10Q9BUA6 226 aa19.91■□□□□ 0.78
LTBR-207ENST00000539925 VPS33BQ9H267 617 aa19.91■□□□□ 0.78
LTBR-207ENST00000539925 TFIP11Q9UBB9 837 aaKnown RBP19.91■□□□□ 0.78
LTBR-207ENST00000539925 TTF2Q9UNY4 1162 aaKnown RBP19.91■□□□□ 0.78
LTBR-207ENST00000539925 FLT1P17948 1338 aa19.91■□□□□ 0.78
LTBR-207ENST00000539925 YEATS4O95619 227 aa19.91■□□□□ 0.78
LTBR-207ENST00000539925 CYP2D6P10635 497 aa19.91■□□□□ 0.78
LTBR-207ENST00000539925 RXRAP19793 462 aa19.91■□□□□ 0.78
LTBR-207ENST00000539925 KIF23Q02241 960 aaPredicted RBP19.91■□□□□ 0.78
LTBR-207ENST00000539925 DOK7Q18PE1 504 aa19.91■□□□□ 0.78
LTBR-207ENST00000539925 SOGA3Q5TF21 947 aa19.91■□□□□ 0.78
LTBR-207ENST00000539925 FAM173BQ6P4H8 233 aa19.91■□□□□ 0.78
LTBR-207ENST00000539925 C16orf86Q6ZW13 317 aa19.91■□□□□ 0.78
LTBR-207ENST00000539925 MAPKAPK5Q8IW41 473 aa19.91■□□□□ 0.78
LTBR-207ENST00000539925 FBXW7Q969H0 707 aa19.91■□□□□ 0.78
LTBR-207ENST00000539925 RTEL1Q9NZ71 1219 aa19.91■□□□□ 0.78
LTBR-207ENST00000539925 NAV1Q8NEY1 1877 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms