RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	ZNF174	Q15697	407 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PLEKHM2	Q8IWE5	1019 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	MICALL1	Q8N3F8	863 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	C8orf37	Q96NL8	207 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	LZTFL1	Q9NQ48	299 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680		M0QZ92	97 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	DAPK3	O43293	454 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	VAMP4	O75379	141 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	UFL1	O94874	794 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	KARS	Q15046	597 aa	Known RBP	10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	C10orf67	Q8IYJ2	551 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	NFATC2IP	Q8NCF5	419 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	SECISBP2L	Q93073	1101 aa	Known RBP	10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	POLK	Q9UBT6	870 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	RIMBP2	O15034	1052 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	LPXN	O60711	386 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ZNF365	Q70YC5	407 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	IGSF22	Q8N9C0	903 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ARHGEF10	O15013	1369 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CFAP74	Q9C0B2	1584 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	UBAP1L	F5GYI3	381 aa		10.02	□□□□□ -0.8
ECHDC2-222	ENST00000539680	SLC27A2	O14975	620 aa		10.02	□□□□□ -0.8
ECHDC2-222	ENST00000539680	C8orf74	Q6P047	294 aa		10.02	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CCDC25	Q86WR0	208 aa		10.02	□□□□□ -0.8
ECHDC2-222	ENST00000539680	APPBP2	Q92624	585 aa		10.02	□□□□□ -0.8
ECHDC2-222	ENST00000539680	TBC1D31	Q96DN5	1066 aa		10.02	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CACYBP	Q9HB71	228 aa	Known RBP	10.02	□□□□□ -0.8
ECHDC2-222	ENST00000539680	GPHN	Q9NQX3	736 aa	Predicted RBP	10.02	□□□□□ -0.8
ECHDC2-222	ENST00000539680	RNF216	Q9NWF9	866 aa	Predicted RBP	10.02	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ZMYM4	Q5VZL5	1548 aa		10.02	□□□□□ -0.8
ECHDC2-222	ENST00000539680	SBNO2	Q9Y2G9	1366 aa		10.02	□□□□□ -0.8
ECHDC2-222	ENST00000539680	SYT10	Q6XYQ8	523 aa		10.02	□□□□□ -0.8
ECHDC2-222	ENST00000539680	POTED	Q86YR6	584 aa		10.02	□□□□□ -0.8
ECHDC2-222	ENST00000539680	AZI2	Q9H6S1	392 aa		10.02	□□□□□ -0.8
ECHDC2-222	ENST00000539680	BCAP29	Q9UHQ4	241 aa		10.02	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CCDC169	A6NNP5	214 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	TRIM37	O94972	964 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	ITGA6	P23229	1130 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	STX17	P56962	302 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	NONO	Q15233	471 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	SLC9C1	Q4G0N8	1177 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	TTC38	Q5R3I4	469 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	RUFY4	Q6ZNE9	571 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	PPP1R9B	Q96SB3	815 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	VCX	Q9H320	206 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	PCDHB15	Q9Y5E8	787 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	INSR	P06213	1382 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	KMT5B	Q4FZB7	885 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	CEP85L	Q5SZL2	805 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	TMTC1	Q8IUR5	882 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	RPUSD2	Q8IZ73	545 aa	Known RBP	10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	IWS1	Q96ST2	819 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	ZBTB40	Q9NUA8	1239 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	KCNH3	Q9ULD8	1083 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	EIF6	P56537	245 aa	Known RBP	10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	C8orf34	Q49A92	452 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.02	□□□□□ -0.81	1e-6	■□□□□ 11.1
ECHDC2-222	ENST00000539680	AS3MT	Q9HBK9	375 aa		10.02	□□□□□ -0.81
ECHDC2-222	ENST00000539680	NOP56	O00567	594 aa	Known RBP	10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	TBC1D8B	Q0IIM8	1120 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	TEKT1	Q969V4	418 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	NT5C3A	Q9H0P0	336 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	VCX3B	Q9H321	246 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	SLC5A4	Q9NY91	659 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	DNM3	Q9UQ16	869 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	ATP10B	O94823	1461 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680		H0YCG3	227 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	PPFIA3	O75145	1194 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	HSP90AA4P	Q58FG1	418 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	RAB3IP	Q96QF0	476 aa	Predicted RBP	10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	GPCPD1	Q9NPB8	672 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	SAP30BP	Q9UHR5	308 aa	Known RBP	10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	GIPC1	O14908	333 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	RHOXF2B	P0C7M4	288 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	PIK3AP1	Q6ZUJ8	805 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	NLRX1	Q86UT6	975 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	TBC1D22A	Q8WUA7	517 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	CCDC51	Q96ER9	411 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	RHOXF2	Q9BQY4	288 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	ANGEL1	Q9UNK9	670 aa	Known RBP	10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	NOD1	Q9Y239	953 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680		I3L4J1	428 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	GNPAT	O15228	680 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	RASA3	Q14644	834 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	OTUD6A	Q7L8S5	288 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	LMNTD2	Q8IXW0	634 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	LPIN2	Q92539	896 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	NPC1L1	Q9UHC9	1359 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	PRIM1	P49642	420 aa	Known RBP	10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	P3H4	Q92791	437 aa		10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680	ARPP21	Q9UBL0	812 aa	Predicted RBP	10.01	□□□□□ -0.81
ECHDC2-222	ENST00000539680		A0A1W2PP64	1363 aa		10	□□□□□ -0.81
ECHDC2-222	ENST00000539680	CASQ2	O14958	399 aa	Predicted RBP	10	□□□□□ -0.81
ECHDC2-222	ENST00000539680	N4BP1	O75113	896 aa	Known RBP	10	□□□□□ -0.81
ECHDC2-222	ENST00000539680	KRT9	P35527	623 aa		10	□□□□□ -0.81
ECHDC2-222	ENST00000539680	SH2D4B	Q5SQS7	431 aa		10	□□□□□ -0.81
ECHDC2-222	ENST00000539680	XAGE2	Q96GT9	111 aa		10	□□□□□ -0.81
ECHDC2-222	ENST00000539680	HAUS7	Q99871	368 aa		10	□□□□□ -0.81
ECHDC2-222	ENST00000539680	CD2AP	Q9Y5K6	639 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms