RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 VPS53Q5VIR6 699 aa15.24■□□□□ 0.03
TSPAN9-207ENST00000539631 CYP4F22Q6NT55 531 aa15.24■□□□□ 0.03
TSPAN9-207ENST00000539631 RGMBQ6NW40 437 aa15.24■□□□□ 0.03
TSPAN9-207ENST00000539631 PAXIP1Q6ZW49 1069 aaPredicted RBP15.24■□□□□ 0.03
TSPAN9-207ENST00000539631 ZNF589Q86UQ0 364 aaPredicted RBP15.24■□□□□ 0.03
TSPAN9-207ENST00000539631 HHIPL1Q96JK4 782 aa15.24■□□□□ 0.03
TSPAN9-207ENST00000539631 CLMNQ96JQ2 1002 aa15.24■□□□□ 0.03
TSPAN9-207ENST00000539631 WRNIP1Q96S55 665 aa15.24■□□□□ 0.03
TSPAN9-207ENST00000539631 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.24■□□□□ 0.03
TSPAN9-207ENST00000539631 EPB41L4AQ9HCS5 686 aaPredicted RBP15.24■□□□□ 0.03
TSPAN9-207ENST00000539631 DOCK1Q14185 1865 aa15.24■□□□□ 0.03
TSPAN9-207ENST00000539631 CYP2D7A0A087X1C5 515 aa15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 PHF20L1A8MW92 1017 aa15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 FOXP2O15409 715 aa15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 APPP05067 770 aa15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 CHMLP26374 656 aa15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 INPP5BP32019 993 aa15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 ZNF157P51786 506 aaPredicted RBP15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 MAP3K9P80192 1104 aa15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 CTR9Q6PD62 1173 aa15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 TTC6Q86TZ1 520 aa15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 FOXP4Q8IVH2 680 aaPredicted RBP15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 ANKRD13AQ8IZ07 590 aa15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 IFNL3Q8IZI9 196 aa15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 CRACR2BQ8N4Y2 399 aaPredicted RBP15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 DDRGK1Q96HY6 314 aa15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 DNAJC18Q9H819 358 aa15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 ZNF112Q9UJU3 913 aa15.23■□□□□ 0.03
TSPAN9-207ENST00000539631 CCDC171Q6TFL3 1326 aa15.22■□□□□ 0.03
TSPAN9-207ENST00000539631 USP17L12C9JPN9 530 aa15.22■□□□□ 0.03
TSPAN9-207ENST00000539631 USP17L21D6R901 530 aa15.22■□□□□ 0.03
TSPAN9-207ENST00000539631 SMIM22K7EJ46 135 aa15.22■□□□□ 0.03
TSPAN9-207ENST00000539631 GRM1Q13255 1194 aa15.22■□□□□ 0.03
TSPAN9-207ENST00000539631 GIMAP6Q6P9H5 292 aa15.22■□□□□ 0.03
TSPAN9-207ENST00000539631 METTL16Q86W50 562 aaKnown RBP15.22■□□□□ 0.03
TSPAN9-207ENST00000539631 DNAJC5GQ8N7S2 189 aa15.22■□□□□ 0.03
TSPAN9-207ENST00000539631 ZKSCAN4Q969J2 545 aaPredicted RBP15.22■□□□□ 0.03
TSPAN9-207ENST00000539631 CAPNS2Q96L46 248 aa15.22■□□□□ 0.03
TSPAN9-207ENST00000539631 IL25Q9H293 177 aa15.22■□□□□ 0.03
TSPAN9-207ENST00000539631 HERC5Q9UII4 1024 aaKnown RBP15.22■□□□□ 0.03
TSPAN9-207ENST00000539631 FAM155AB1AL88 458 aaPredicted RBP15.21■□□□□ 0.03
TSPAN9-207ENST00000539631 TDO2P48775 406 aa15.21■□□□□ 0.03
TSPAN9-207ENST00000539631 VEGFBP49765 207 aa15.21■□□□□ 0.03
TSPAN9-207ENST00000539631 VGLL4Q14135 290 aa15.21■□□□□ 0.03
TSPAN9-207ENST00000539631 RRP1BQ14684 758 aaKnown RBP15.21■□□□□ 0.03
TSPAN9-207ENST00000539631 C12orf60Q5U649 245 aa15.21■□□□□ 0.03
TSPAN9-207ENST00000539631 RASAL3Q86YV0 1011 aa15.21■□□□□ 0.03
TSPAN9-207ENST00000539631 SLC10A4Q96EP9 437 aa15.21■□□□□ 0.03
TSPAN9-207ENST00000539631 TRIM34Q9BYJ4 488 aa15.21■□□□□ 0.03
TSPAN9-207ENST00000539631 EHD4Q9H223 541 aa15.21■□□□□ 0.03
TSPAN9-207ENST00000539631 ELP3Q9H9T3 547 aa15.21■□□□□ 0.03
TSPAN9-207ENST00000539631 ARPP21Q9UBL0 812 aaPredicted RBP15.21■□□□□ 0.03
TSPAN9-207ENST00000539631 SERPINB13Q9UIV8 391 aa15.21■□□□□ 0.03
TSPAN9-207ENST00000539631 CSADQ9Y600 493 aa15.21■□□□□ 0.03
TSPAN9-207ENST00000539631 PHIPQ8WWQ0 1821 aa15.21■□□□□ 0.03
TSPAN9-207ENST00000539631 WDR33Q9C0J8 1336 aaKnown RBP15.2■□□□□ 0.02
TSPAN9-207ENST00000539631 UNCXA6NJT0 531 aa15.2■□□□□ 0.02
TSPAN9-207ENST00000539631 MINDY4BA8MYZ0 360 aa15.2■□□□□ 0.02
TSPAN9-207ENST00000539631 SLC10A3P09131 477 aa15.2■□□□□ 0.02
TSPAN9-207ENST00000539631 HSPD1P10809 573 aaKnown RBP15.2■□□□□ 0.02
TSPAN9-207ENST00000539631 ECE1P42892 770 aa15.2■□□□□ 0.02
TSPAN9-207ENST00000539631 MFAP1P55081 439 aaKnown RBP15.2■□□□□ 0.02
TSPAN9-207ENST00000539631 SBK1Q52WX2 424 aa15.2■□□□□ 0.02
TSPAN9-207ENST00000539631 AMOTL1Q8IY63 956 aa15.2■□□□□ 0.02
TSPAN9-207ENST00000539631 DYNLL2Q96FJ2 89 aa15.2■□□□□ 0.02
TSPAN9-207ENST00000539631 NACAP1Q9BZK3 213 aa15.2■□□□□ 0.02
TSPAN9-207ENST00000539631 NAPBQ9H115 298 aa15.2■□□□□ 0.02
TSPAN9-207ENST00000539631 SNCAIPQ9Y6H5 919 aa15.2■□□□□ 0.02
TSPAN9-207ENST00000539631 THSD7BQ9C0I4 1608 aa15.2■□□□□ 0.02
TSPAN9-207ENST00000539631 AOC2O75106 756 aa15.19■□□□□ 0.02
TSPAN9-207ENST00000539631 GABPAQ06546 454 aa15.19■□□□□ 0.02
TSPAN9-207ENST00000539631 MKRN3Q13064 507 aaKnown RBP15.19■□□□□ 0.02
TSPAN9-207ENST00000539631 NOL9Q5SY16 702 aaKnown RBP15.19■□□□□ 0.02
TSPAN9-207ENST00000539631 SCYL3Q8IZE3 742 aa15.19■□□□□ 0.02
TSPAN9-207ENST00000539631 RUFY2Q8WXA3 655 aa15.19■□□□□ 0.02
TSPAN9-207ENST00000539631 CNKSR2Q8WXI2 1034 aa15.19■□□□□ 0.02
TSPAN9-207ENST00000539631 CCDC102AQ96A19 550 aa15.19■□□□□ 0.02
TSPAN9-207ENST00000539631 WNK4Q96J92 1243 aa15.19■□□□□ 0.02
TSPAN9-207ENST00000539631 GTF3C3Q9Y5Q9 886 aa15.19■□□□□ 0.02
TSPAN9-207ENST00000539631 RAD50Q92878 1312 aa15.18■□□□□ 0.02
TSPAN9-207ENST00000539631 LAMA4Q16363 1823 aa15.18■□□□□ 0.02
TSPAN9-207ENST00000539631 SHMT1P34896 483 aa15.18■□□□□ 0.02
TSPAN9-207ENST00000539631 GJA5P36382 358 aa15.18■□□□□ 0.02
TSPAN9-207ENST00000539631 ALX1Q15699 326 aa15.18■□□□□ 0.02
TSPAN9-207ENST00000539631 TATDN1Q6P1N9 297 aa15.18■□□□□ 0.02
TSPAN9-207ENST00000539631 STK11IPQ8N1F8 1099 aa15.18■□□□□ 0.02
TSPAN9-207ENST00000539631 SLC44A5Q8NCS7 719 aa15.18■□□□□ 0.02
TSPAN9-207ENST00000539631 OPTNQ96CV9 577 aa15.18■□□□□ 0.02
TSPAN9-207ENST00000539631 ZIC5Q96T25 663 aa15.18■□□□□ 0.02
TSPAN9-207ENST00000539631 SGSM2O43147 1006 aa15.17■□□□□ 0.02
TSPAN9-207ENST00000539631 CTNND1O60716 968 aaKnown RBP15.17■□□□□ 0.02
TSPAN9-207ENST00000539631 GDF11O95390 407 aa15.17■□□□□ 0.02
TSPAN9-207ENST00000539631 FGAP02671 866 aa15.17■□□□□ 0.02
TSPAN9-207ENST00000539631 CAP2P40123 477 aa15.17■□□□□ 0.02
TSPAN9-207ENST00000539631 JAG1P78504 1218 aa15.17■□□□□ 0.02
TSPAN9-207ENST00000539631 SHROOM1Q2M3G4 852 aaPredicted RBP15.17■□□□□ 0.02
TSPAN9-207ENST00000539631 SPRYD7Q5W111 196 aa15.17■□□□□ 0.02
TSPAN9-207ENST00000539631 C16orf86Q6ZW13 317 aa15.17■□□□□ 0.02
TSPAN9-207ENST00000539631 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms