RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 SPATA5Q8NB90 893 aa18.79■□□□□ 0.6
SCARB1-205ENST00000538291 TRIM7Q9C029 511 aa18.79■□□□□ 0.6
SCARB1-205ENST00000538291 KCNK9Q9NPC2 374 aa18.79■□□□□ 0.6
SCARB1-205ENST00000538291 USP21Q9UK80 565 aa18.79■□□□□ 0.6
SCARB1-205ENST00000538291 CEP128Q6ZU80 1094 aa18.78■□□□□ 0.6
SCARB1-205ENST00000538291 TCP10Q12799 353 aa18.78■□□□□ 0.6
SCARB1-205ENST00000538291 KLHDC4Q8TBB5 520 aa18.78■□□□□ 0.6
SCARB1-205ENST00000538291 SNX29Q8TEQ0 813 aa18.78■□□□□ 0.6
SCARB1-205ENST00000538291 DNM3Q9UQ16 869 aa18.78■□□□□ 0.6
SCARB1-205ENST00000538291 DDX39AO00148 427 aaKnown RBP18.78■□□□□ 0.6
SCARB1-205ENST00000538291 KBTBD3Q8NAB2 608 aa18.78■□□□□ 0.6
SCARB1-205ENST00000538291 BAG1Q99933 345 aaPredicted RBP18.78■□□□□ 0.6
SCARB1-205ENST00000538291 H7C1D1 291 aa18.78■□□□□ 0.6
SCARB1-205ENST00000538291 IVLP07476 585 aa18.78■□□□□ 0.6
SCARB1-205ENST00000538291 CPA1P15085 419 aa18.78■□□□□ 0.6
SCARB1-205ENST00000538291 CSGALNACT2Q8N6G5 542 aa18.78■□□□□ 0.6
SCARB1-205ENST00000538291 PROCA1Q8NCQ7 364 aaPredicted RBP18.78■□□□□ 0.6
SCARB1-205ENST00000538291 GABPB2Q8TAK5 448 aaPredicted RBP18.78■□□□□ 0.6
SCARB1-205ENST00000538291 ZBTB7BO15156 539 aaPredicted RBP18.77■□□□□ 0.6
SCARB1-205ENST00000538291 MAPKAPK5Q8IW41 473 aa18.77■□□□□ 0.6
SCARB1-205ENST00000538291 PODXL2Q9NZ53 605 aa18.77■□□□□ 0.6
SCARB1-205ENST00000538291 AOX1Q06278 1338 aa18.77■□□□□ 0.6
SCARB1-205ENST00000538291 STK10O94804 968 aaKnown RBP18.77■□□□□ 0.6
SCARB1-205ENST00000538291 MSL1Q68DK7 614 aa18.77■□□□□ 0.6
SCARB1-205ENST00000538291 PPIP5K2O43314 1243 aa18.77■□□□□ 0.6
SCARB1-205ENST00000538291 SMCR8Q8TEV9 937 aaPredicted RBP18.77■□□□□ 0.6
SCARB1-205ENST00000538291 CCT6BQ92526 530 aa18.77■□□□□ 0.6
SCARB1-205ENST00000538291 NACA2Q9H009 215 aa18.77■□□□□ 0.59
SCARB1-205ENST00000538291 EDC4Q6P2E9 1401 aaKnown RBP18.76■□□□□ 0.59
SCARB1-205ENST00000538291 LPXNO60711 386 aa18.76■□□□□ 0.59
SCARB1-205ENST00000538291 CFBP00751 764 aa18.76■□□□□ 0.59
SCARB1-205ENST00000538291 ASIC2Q16515 512 aa18.76■□□□□ 0.59
SCARB1-205ENST00000538291 USH1GQ495M9 461 aa18.76■□□□□ 0.59
SCARB1-205ENST00000538291 TESK2Q96S53 571 aa18.76■□□□□ 0.59
SCARB1-205ENST00000538291 ZKSCAN5Q9Y2L8 839 aa18.76■□□□□ 0.59
SCARB1-205ENST00000538291 KIAA0556O60303 1618 aa18.76■□□□□ 0.59
SCARB1-205ENST00000538291 CUTAO60888 179 aa18.76■□□□□ 0.59
SCARB1-205ENST00000538291 HERC4Q5GLZ8 1057 aaPredicted RBP18.76■□□□□ 0.59
SCARB1-205ENST00000538291 IGSF22Q8N9C0 903 aa18.76■□□□□ 0.59
SCARB1-205ENST00000538291 VPS16Q9H269 839 aa18.76■□□□□ 0.59
SCARB1-205ENST00000538291 LGR6Q9HBX8 967 aa18.76■□□□□ 0.59
SCARB1-205ENST00000538291 IL13P35225 146 aa18.76■□□□□ 0.59
SCARB1-205ENST00000538291 TNFAIP1Q13829 316 aa18.76■□□□□ 0.59
SCARB1-205ENST00000538291 PPP1R21Q6ZMI0 780 aa18.76■□□□□ 0.59
SCARB1-205ENST00000538291 CCDC24Q8N4L8 307 aa18.76■□□□□ 0.59
SCARB1-205ENST00000538291 GCKRQ14397 625 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 MAEAQ7L5Y9 396 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 CPLX4Q7Z7G2 160 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 KCNG1Q9UIX4 513 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 GMNNO75496 209 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 RHOXF2BP0C7M4 288 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 RFX1P22670 979 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 RHOXF2Q9BQY4 288 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 CLUL1Q15846 466 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 C8orf34Q49A92 452 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 TGFBRAP1Q8WUH2 860 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 SUCLG2Q96I99 432 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 RSPH14Q9UHP6 348 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 HACE1Q8IYU2 909 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 SLC5A4Q9NY91 659 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 CRCPO75575 148 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 ARID4AP29374 1257 aaPredicted RBP18.75■□□□□ 0.59
SCARB1-205ENST00000538291 CTDSPL2Q05D32 466 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 SYT10Q6XYQ8 523 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 CCDC121Q6ZUS5 278 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 NKIRAS1Q9NYS0 192 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 CSADQ9Y600 493 aa18.75■□□□□ 0.59
SCARB1-205ENST00000538291 SETDB1Q15047 1291 aa18.74■□□□□ 0.59
SCARB1-205ENST00000538291 ZNF365Q70YC5 407 aa18.74■□□□□ 0.59
SCARB1-205ENST00000538291 MYCT1Q8N699 235 aa18.74■□□□□ 0.59
SCARB1-205ENST00000538291 SPC25Q9HBM1 224 aa18.74■□□□□ 0.59
SCARB1-205ENST00000538291 NUP153P49790 1475 aaKnown RBP18.74■□□□□ 0.59
SCARB1-205ENST00000538291 UAP1Q16222 522 aaPredicted RBP18.74■□□□□ 0.59
SCARB1-205ENST00000538291 GEN1Q17RS7 908 aa18.74■□□□□ 0.59
SCARB1-205ENST00000538291 UBL4BQ8N7F7 174 aa18.74■□□□□ 0.59
SCARB1-205ENST00000538291 EXOC3O60645 756 aa18.74■□□□□ 0.59
SCARB1-205ENST00000538291 PAK1Q13153 545 aa18.74■□□□□ 0.59
SCARB1-205ENST00000538291 MAPK8IP2Q13387 824 aaPredicted RBP18.74■□□□□ 0.59
SCARB1-205ENST00000538291 CALCRLQ16602 461 aa18.74■□□□□ 0.59
SCARB1-205ENST00000538291 AS3MTQ9HBK9 375 aa18.74■□□□□ 0.59
SCARB1-205ENST00000538291 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.74■□□□□ 0.593e-7■□□□□ 9.2
SCARB1-205ENST00000538291 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.74■□□□□ 0.59
SCARB1-205ENST00000538291 V9GYY5 206 aaPredicted RBP18.74■□□□□ 0.59
SCARB1-205ENST00000538291 ATP5DP30049 168 aa18.74■□□□□ 0.59
SCARB1-205ENST00000538291 CCDC125Q86Z20 511 aa18.74■□□□□ 0.59
SCARB1-205ENST00000538291 ZNF710Q8N1W2 664 aa18.74■□□□□ 0.59
SCARB1-205ENST00000538291 UBLCP1Q8WVY7 318 aaPredicted RBP18.74■□□□□ 0.59
SCARB1-205ENST00000538291 NCOA5Q9HCD5 579 aaKnown RBP18.74■□□□□ 0.59
SCARB1-205ENST00000538291 ZNF532Q9HCE3 1301 aa18.74■□□□□ 0.59
SCARB1-205ENST00000538291 RPS8P62241 208 aaKnown RBP18.73■□□□□ 0.59
SCARB1-205ENST00000538291 FNBP4Q8N3X1 1017 aaPredicted RBP18.73■□□□□ 0.59
SCARB1-205ENST00000538291 FLAD1Q8NFF5 587 aa18.73■□□□□ 0.59
SCARB1-205ENST00000538291 CHURC1Q8WUH1 139 aa18.73■□□□□ 0.59
SCARB1-205ENST00000538291 CFAP57Q96MR6 1250 aa18.73■□□□□ 0.59
SCARB1-205ENST00000538291 SLAIN2Q9P270 581 aa18.73■□□□□ 0.59
SCARB1-205ENST00000538291 CHL1O00533 1208 aa18.73■□□□□ 0.59
SCARB1-205ENST00000538291 POLR2DO15514 142 aaKnown RBP18.73■□□□□ 0.59
SCARB1-205ENST00000538291 ACTN4O43707 911 aaKnown RBP18.73■□□□□ 0.59
SCARB1-205ENST00000538291 SAMD15Q9P1V8 674 aa18.73■□□□□ 0.59
SCARB1-205ENST00000538291 MNAT1P51948 309 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms