RNA–Protein interactions for RNA: ENST00000537597.1

SRRM4-202, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-202ENST00000537597 ZBTB48P10074 688 aaPredicted RBP18.25■□□□□ 0.51
SRRM4-202ENST00000537597 PLCD1P51178 756 aa18.25■□□□□ 0.51
SRRM4-202ENST00000537597 JAG1P78504 1218 aa18.25■□□□□ 0.51
SRRM4-202ENST00000537597 KIF23Q02241 960 aaPredicted RBP18.25■□□□□ 0.51
SRRM4-202ENST00000537597 EVX2Q03828 476 aa18.25■□□□□ 0.51
SRRM4-202ENST00000537597 TTLL12Q14166 644 aaPredicted RBP18.25■□□□□ 0.51
SRRM4-202ENST00000537597 TTC22Q5TAA0 569 aa18.25■□□□□ 0.51
SRRM4-202ENST00000537597 GIMAP6Q6P9H5 292 aa18.25■□□□□ 0.51
SRRM4-202ENST00000537597 WRNIP1Q96S55 665 aa18.25■□□□□ 0.51
SRRM4-202ENST00000537597 TAOK2Q9UL54 1235 aa18.25■□□□□ 0.51
SRRM4-202ENST00000537597 MYH1P12882 1939 aa18.24■□□□□ 0.51
SRRM4-202ENST00000537597 CTNND1O60716 968 aaKnown RBP18.24■□□□□ 0.51
SRRM4-202ENST00000537597 LRRFIP1Q32MZ4 808 aaKnown RBP18.24■□□□□ 0.51
SRRM4-202ENST00000537597 CNKSR2Q8WXI2 1034 aa18.24■□□□□ 0.51
SRRM4-202ENST00000537597 FSD1Q9BTV5 496 aa18.24■□□□□ 0.51
SRRM4-202ENST00000537597 HELLSQ9NRZ9 838 aa18.24■□□□□ 0.51
SRRM4-202ENST00000537597 SMIM22K7EJ46 135 aa18.23■□□□□ 0.51
SRRM4-202ENST00000537597 GPAA1O43292 621 aa18.23■□□□□ 0.51
SRRM4-202ENST00000537597 SDSP20132 328 aa18.23■□□□□ 0.51
SRRM4-202ENST00000537597 USP5P45974 858 aa18.23■□□□□ 0.51
SRRM4-202ENST00000537597 SBK1Q52WX2 424 aa18.23■□□□□ 0.51
SRRM4-202ENST00000537597 C12orf60Q5U649 245 aa18.23■□□□□ 0.51
SRRM4-202ENST00000537597 ERO1BQ86YB8 467 aa18.23■□□□□ 0.51
SRRM4-202ENST00000537597 REM2Q8IYK8 340 aaPredicted RBP18.23■□□□□ 0.51
SRRM4-202ENST00000537597 EPB41L4AQ9HCS5 686 aaPredicted RBP18.23■□□□□ 0.51
SRRM4-202ENST00000537597 AK9Q5TCS8 1911 aa18.22■□□□□ 0.51
SRRM4-202ENST00000537597 PATL2C9JE40 543 aaKnown RBP18.22■□□□□ 0.51
SRRM4-202ENST00000537597 PPATQ06203 517 aa18.22■□□□□ 0.51
SRRM4-202ENST00000537597 MOGSQ13724 837 aa18.22■□□□□ 0.51
SRRM4-202ENST00000537597 CTR9Q6PD62 1173 aa18.22■□□□□ 0.51
SRRM4-202ENST00000537597 ZSCAN29Q8IWY8 852 aaPredicted RBP18.22■□□□□ 0.51
SRRM4-202ENST00000537597 AIDAQ96BJ3 306 aa18.22■□□□□ 0.51
SRRM4-202ENST00000537597 ELP3Q9H9T3 547 aa18.22■□□□□ 0.51
SRRM4-202ENST00000537597 SAP30BPQ9UHR5 308 aaKnown RBP18.22■□□□□ 0.51
SRRM4-202ENST00000537597 KCNH4Q9UQ05 1017 aa18.22■□□□□ 0.51
SRRM4-202ENST00000537597 PHIPQ8WWQ0 1821 aa18.21■□□□□ 0.51
SRRM4-202ENST00000537597 A0A0D9SFI3 127 aa18.21■□□□□ 0.51
SRRM4-202ENST00000537597 FAM196BA6NMK8 535 aa18.21■□□□□ 0.51
SRRM4-202ENST00000537597 SHMT1P34896 483 aa18.21■□□□□ 0.51
SRRM4-202ENST00000537597 CAP2P40123 477 aa18.21■□□□□ 0.51
SRRM4-202ENST00000537597 TTC6Q86TZ1 520 aa18.21■□□□□ 0.51
SRRM4-202ENST00000537597 SCYL3Q8IZE3 742 aa18.21■□□□□ 0.51
SRRM4-202ENST00000537597 OPTNQ96CV9 577 aa18.21■□□□□ 0.51
SRRM4-202ENST00000537597 FAM227BQ96M60 508 aa18.21■□□□□ 0.51
SRRM4-202ENST00000537597 PTPN18Q99952 460 aa18.21■□□□□ 0.51
SRRM4-202ENST00000537597 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.21■□□□□ 0.51
SRRM4-202ENST00000537597 SLC4A4Q9Y6R1 1079 aa18.21■□□□□ 0.51
SRRM4-202ENST00000537597 USP17L12C9JPN9 530 aa18.2■□□□□ 0.5
SRRM4-202ENST00000537597 USP17L21D6R901 530 aa18.2■□□□□ 0.5
SRRM4-202ENST00000537597 CYP2D6P10635 497 aa18.2■□□□□ 0.5
SRRM4-202ENST00000537597 PTPRAP18433 802 aa18.2■□□□□ 0.5
SRRM4-202ENST00000537597 GNAT2P19087 354 aa18.2■□□□□ 0.5
SRRM4-202ENST00000537597 INHBEP58166 350 aa18.2■□□□□ 0.5
SRRM4-202ENST00000537597 MAP2K1Q02750 393 aaPredicted RBP18.2■□□□□ 0.5
SRRM4-202ENST00000537597 PPIL2Q13356 520 aa18.2■□□□□ 0.5
SRRM4-202ENST00000537597 ALX1Q15699 326 aa18.2■□□□□ 0.5
SRRM4-202ENST00000537597 SKAP1Q86WV1 359 aa18.2■□□□□ 0.5
SRRM4-202ENST00000537597 CFHR5Q9BXR6 569 aa18.2■□□□□ 0.5
SRRM4-202ENST00000537597 GINM1Q9NU53 330 aa18.2■□□□□ 0.5
SRRM4-202ENST00000537597 MCM9Q9NXL9 1143 aa18.2■□□□□ 0.5
SRRM4-202ENST00000537597 PPP4R2Q9NY27 417 aa18.2■□□□□ 0.5
SRRM4-202ENST00000537597 SERPINB13Q9UIV8 391 aa18.2■□□□□ 0.5
SRRM4-202ENST00000537597 AFG3L2Q9Y4W6 797 aa18.2■□□□□ 0.5
SRRM4-202ENST00000537597 CSADQ9Y600 493 aa18.2■□□□□ 0.5
SRRM4-202ENST00000537597 IRF6O14896 467 aa18.19■□□□□ 0.5
SRRM4-202ENST00000537597 NMIQ13287 307 aaPredicted RBP18.19■□□□□ 0.5
SRRM4-202ENST00000537597 MCMDC2Q4G0Z9 681 aa18.19■□□□□ 0.5
SRRM4-202ENST00000537597 IFNL3Q8IZI9 196 aa18.19■□□□□ 0.5
SRRM4-202ENST00000537597 NAV1Q8NEY1 1877 aa18.19■□□□□ 0.5
SRRM4-202ENST00000537597 CCDC136Q96JN2 1154 aa18.19■□□□□ 0.5
SRRM4-202ENST00000537597 BAZ2AQ9UIF9 1905 aaKnown RBP18.18■□□□□ 0.5
SRRM4-202ENST00000537597 SHROOM1Q2M3G4 852 aaPredicted RBP18.18■□□□□ 0.5
SRRM4-202ENST00000537597 ZNF589Q86UQ0 364 aaPredicted RBP18.18■□□□□ 0.5
SRRM4-202ENST00000537597 RILPL2Q969X0 211 aa18.18■□□□□ 0.5
SRRM4-202ENST00000537597 IL25Q9H293 177 aa18.18■□□□□ 0.5
SRRM4-202ENST00000537597 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
SRRM4-202ENST00000537597 CYP2D7A0A087X1C5 515 aa18.17■□□□□ 0.5
SRRM4-202ENST00000537597 MANSC4A6NHS7 340 aaPredicted RBP18.17■□□□□ 0.5
SRRM4-202ENST00000537597 TRIM6-TRIM34B2RNG4 842 aa18.17■□□□□ 0.5
SRRM4-202ENST00000537597 CXCL11O14625 94 aa18.17■□□□□ 0.5
SRRM4-202ENST00000537597 HLA-DOAP06340 250 aa18.17■□□□□ 0.5
SRRM4-202ENST00000537597 NEFLP07196 543 aa18.17■□□□□ 0.5
SRRM4-202ENST00000537597 GUCY1A2P33402 732 aa18.17■□□□□ 0.5
SRRM4-202ENST00000537597 VPS53Q5VIR6 699 aa18.17■□□□□ 0.5
SRRM4-202ENST00000537597 CCDC129Q6ZRS4 1044 aa18.17■□□□□ 0.5
SRRM4-202ENST00000537597 C16orf86Q6ZW13 317 aa18.17■□□□□ 0.5
SRRM4-202ENST00000537597 PAXIP1Q6ZW49 1069 aaPredicted RBP18.17■□□□□ 0.5
SRRM4-202ENST00000537597 BRI3BPQ8WY22 251 aa18.17■□□□□ 0.5
SRRM4-202ENST00000537597 RNF186Q9NXI6 227 aa18.17■□□□□ 0.5
SRRM4-202ENST00000537597 DOCK1Q14185 1865 aa18.16■□□□□ 0.5
SRRM4-202ENST00000537597 IGF2BP3O00425 579 aaKnown RBP eCLIP18.16■□□□□ 0.5
SRRM4-202ENST00000537597 POLR3DP05423 398 aaPredicted RBP18.16■□□□□ 0.5
SRRM4-202ENST00000537597 HSPA1AP0DMV8 641 aaKnown RBP18.16■□□□□ 0.5
SRRM4-202ENST00000537597 HSPA1BP0DMV9 641 aaKnown RBP18.16■□□□□ 0.5
SRRM4-202ENST00000537597 WDR18Q9BV38 432 aa18.16■□□□□ 0.5
SRRM4-202ENST00000537597 SAGE1Q9NXZ1 904 aa18.16■□□□□ 0.5
SRRM4-202ENST00000537597 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.16■□□□□ 0.5
SRRM4-202ENST00000537597 FOXN1O15353 648 aa18.15■□□□□ 0.5
SRRM4-202ENST00000537597 FGRP09769 529 aa18.15■□□□□ 0.5
SRRM4-202ENST00000537597 CHMLP26374 656 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms