RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 CYB5R4Q7L1T6 521 aa18.55■□□□□ 0.56
SFSWAP-206ENST00000537582 MB21D2Q8IYB1 491 aaPredicted RBP18.55■□□□□ 0.56
SFSWAP-206ENST00000537582 LARP6Q9BRS8 491 aaKnown RBP18.55■□□□□ 0.56
SFSWAP-206ENST00000537582 TM6SF1Q9BZW5 370 aa18.55■□□□□ 0.56
SFSWAP-206ENST00000537582 TOMM22Q9NS69 142 aa18.55■□□□□ 0.56
SFSWAP-206ENST00000537582 RPS6KB1P23443 525 aa18.54■□□□□ 0.56
SFSWAP-206ENST00000537582 EPHX2P34913 555 aa18.54■□□□□ 0.56
SFSWAP-206ENST00000537582 ANTXR2P58335 489 aa18.54■□□□□ 0.56
SFSWAP-206ENST00000537582 RUFY3Q7L099 469 aa18.54■□□□□ 0.56
SFSWAP-206ENST00000537582 AMOTL1Q8IY63 956 aa18.54■□□□□ 0.56
SFSWAP-206ENST00000537582 FAM151AQ8WW52 585 aa18.54■□□□□ 0.56
SFSWAP-206ENST00000537582 GPHNQ9NQX3 736 aaPredicted RBP18.54■□□□□ 0.56
SFSWAP-206ENST00000537582 KDM4AO75164 1064 aa18.53■□□□□ 0.56
SFSWAP-206ENST00000537582 PSMA5P28066 241 aa18.53■□□□□ 0.56
SFSWAP-206ENST00000537582 RASA3Q14644 834 aa18.53■□□□□ 0.56
SFSWAP-206ENST00000537582 FKBP1CQ5VVH2 108 aa18.53■□□□□ 0.56
SFSWAP-206ENST00000537582 DLK2Q6UY11 383 aa18.53■□□□□ 0.56
SFSWAP-206ENST00000537582 NOL8Q76FK4 1167 aaKnown RBP18.53■□□□□ 0.56
SFSWAP-206ENST00000537582 NCOA7Q8NI08 942 aa18.53■□□□□ 0.56
SFSWAP-206ENST00000537582 TTC14Q96N46 770 aa18.53■□□□□ 0.56
SFSWAP-206ENST00000537582 DNAJC18Q9H819 358 aa18.53■□□□□ 0.56
SFSWAP-206ENST00000537582 PGAP2Q9UHJ9 254 aa18.53■□□□□ 0.56
SFSWAP-206ENST00000537582 CYP46A1Q9Y6A2 500 aa18.53■□□□□ 0.56
SFSWAP-206ENST00000537582 ATRNL1Q5VV63 1379 aa18.53■□□□□ 0.56
SFSWAP-206ENST00000537582 FGRP09769 529 aa18.52■□□□□ 0.56
SFSWAP-206ENST00000537582 GABPAQ06546 454 aa18.52■□□□□ 0.56
SFSWAP-206ENST00000537582 C16orf86Q6ZW13 317 aa18.52■□□□□ 0.56
SFSWAP-206ENST00000537582 RALYLQ86SE5 291 aaKnown RBP18.52■□□□□ 0.56
SFSWAP-206ENST00000537582 TTC6Q86TZ1 520 aa18.52■□□□□ 0.56
SFSWAP-206ENST00000537582 TAF1DQ9H5J8 278 aaPredicted RBP18.52■□□□□ 0.56
SFSWAP-206ENST00000537582 PDRG1Q9NUG6 133 aa18.52■□□□□ 0.56
SFSWAP-206ENST00000537582 WDR90Q96KV7 1748 aa18.52■□□□□ 0.56
SFSWAP-206ENST00000537582 CDK8P49336 464 aa18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 EXOSC10Q01780 885 aaKnown RBP18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 FAM47AQ5JRC9 791 aa18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 PRAMEF18Q5VWM3 479 aa18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 FAM83AQ86UY5 434 aa18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 ZNF526Q8TF50 670 aaPredicted RBP18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 CSRNP1Q96S65 589 aa18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 RNF41Q9H4P4 317 aaPredicted RBP18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 ZSWIM5Q9P217 1185 aa18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 COL2A1P02458 1487 aaPredicted RBP18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 PRC1O43663 620 aa18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 HLA-DOAP06340 250 aa18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 SLC3A2P08195 630 aaKnown RBP18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 ANP32AP39687 249 aaKnown RBP18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 AK2P54819 239 aa18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 TRDNQ13061 729 aa18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 DHX32Q7L7V1 743 aaKnown RBP18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 TEPSINQ96N21 525 aa18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 ZKSCAN3Q9BRR0 538 aa18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 DEFB129Q9H1M3 183 aa18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 DHX36Q9H2U1 1008 aaKnown RBP18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 SERPINB13Q9UIV8 391 aa18.51■□□□□ 0.55
SFSWAP-206ENST00000537582 ORC4O43929 436 aa18.5■□□□□ 0.55
SFSWAP-206ENST00000537582 RANBP6O60518 1105 aaKnown RBP18.5■□□□□ 0.55
SFSWAP-206ENST00000537582 POTEIP0CG38 1075 aa18.5■□□□□ 0.55
SFSWAP-206ENST00000537582 POTEJP0CG39 1038 aa18.5■□□□□ 0.55
SFSWAP-206ENST00000537582 RASA1P20936 1047 aa18.5■□□□□ 0.55
SFSWAP-206ENST00000537582 SHMT1P34896 483 aa18.5■□□□□ 0.55
SFSWAP-206ENST00000537582 PDE4BQ07343 736 aa18.5■□□□□ 0.55
SFSWAP-206ENST00000537582 SHROOM1Q2M3G4 852 aaPredicted RBP18.5■□□□□ 0.55
SFSWAP-206ENST00000537582 EAPPQ56P03 285 aaPredicted RBP18.5■□□□□ 0.55
SFSWAP-206ENST00000537582 CNNM2Q9H8M5 875 aa18.5■□□□□ 0.55
SFSWAP-206ENST00000537582 PI4KBQ9UBF8 816 aa18.5■□□□□ 0.55
SFSWAP-206ENST00000537582 NMT2O60551 498 aa18.49■□□□□ 0.55
SFSWAP-206ENST00000537582 TOB2Q14106 344 aaPredicted RBP18.49■□□□□ 0.55
SFSWAP-206ENST00000537582 Q6ZUG5 572 aa18.49■□□□□ 0.55
SFSWAP-206ENST00000537582 TBC1D2Q9BYX2 928 aa18.49■□□□□ 0.55
SFSWAP-206ENST00000537582 KRT23Q9C075 422 aa18.49■□□□□ 0.55
SFSWAP-206ENST00000537582 EHD4Q9H223 541 aa18.49■□□□□ 0.55
SFSWAP-206ENST00000537582 RRAGCQ9HB90 399 aa18.49■□□□□ 0.55
SFSWAP-206ENST00000537582 MKNK2Q9HBH9 465 aa18.49■□□□□ 0.55
SFSWAP-206ENST00000537582 SENP2Q9HC62 589 aa18.49■□□□□ 0.55
SFSWAP-206ENST00000537582 ADM5C9JUS6 153 aa18.48■□□□□ 0.55
SFSWAP-206ENST00000537582 HMGB1P09429 215 aaKnown RBP18.48■□□□□ 0.55
SFSWAP-206ENST00000537582 MCM5P33992 734 aa18.48■□□□□ 0.55
SFSWAP-206ENST00000537582 SLC4A3P48751 1232 aa18.48■□□□□ 0.55
SFSWAP-206ENST00000537582 TNNI2P48788 182 aa18.48■□□□□ 0.55
SFSWAP-206ENST00000537582 USP50Q70EL3 339 aaPredicted RBP18.48■□□□□ 0.55
SFSWAP-206ENST00000537582 MIGA2Q7L4E1 593 aa18.48■□□□□ 0.55
SFSWAP-206ENST00000537582 APOBEC3FQ8IUX4 373 aaKnown RBP18.48■□□□□ 0.55
SFSWAP-206ENST00000537582 CRACR2BQ8N4Y2 399 aaPredicted RBP18.48■□□□□ 0.55
SFSWAP-206ENST00000537582 NMRK2Q9NPI5 230 aa18.48■□□□□ 0.55
SFSWAP-206ENST00000537582 SCN4AP35499 1836 aa18.48■□□□□ 0.55
SFSWAP-206ENST00000537582 IQCA1LA6NCM1 817 aa18.47■□□□□ 0.55
SFSWAP-206ENST00000537582 TFAP4Q01664 338 aa18.47■□□□□ 0.55
SFSWAP-206ENST00000537582 TNFAIP1Q13829 316 aa18.47■□□□□ 0.55
SFSWAP-206ENST00000537582 RRP1BQ14684 758 aaKnown RBP18.47■□□□□ 0.55
SFSWAP-206ENST00000537582 NBPF12Q5TAG4 269 aaPredicted RBP18.47■□□□□ 0.55
SFSWAP-206ENST00000537582 ESR2Q92731 530 aa18.47■□□□□ 0.55
SFSWAP-206ENST00000537582 ST18O60284 1047 aa18.47■□□□□ 0.55
SFSWAP-206ENST00000537582 PCP11498 1178 aaKnown RBP18.47■□□□□ 0.55
SFSWAP-206ENST00000537582 AKR1B1P15121 316 aa18.47■□□□□ 0.55
SFSWAP-206ENST00000537582 METTL16Q86W50 562 aaKnown RBP18.47■□□□□ 0.55
SFSWAP-206ENST00000537582 TSPY2A6NKD2 308 aa18.46■□□□□ 0.55
SFSWAP-206ENST00000537582 LARGE1O95461 756 aa18.46■□□□□ 0.55
SFSWAP-206ENST00000537582 JAG1P78504 1218 aa18.46■□□□□ 0.55
SFSWAP-206ENST00000537582 BRF1Q92994 677 aa18.46■□□□□ 0.55
SFSWAP-206ENST00000537582 SNX21Q969T3 373 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 195.1 ms