RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 SRRDQ9UH36 339 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 PNMA3Q9UL41 463 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 SLC45A1Q9Y2W3 748 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 AFG3L2Q9Y4W6 797 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 FPGT-TNNI3KV9GXZ4 949 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 MYPNQ86TC9 1320 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 ATAD5Q96QE3 1844 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 PHIPQ8WWQ0 1821 aa12.03□□□□□ -0.48
CCDC170-202ENST00000537358 MYCP01106 439 aaPredicted RBP12.03□□□□□ -0.48
CCDC170-202ENST00000537358 EN2P19622 333 aaPredicted RBP12.03□□□□□ -0.48
CCDC170-202ENST00000537358 CAP1Q01518 475 aa12.03□□□□□ -0.48
CCDC170-202ENST00000537358 PABPC4Q13310 644 aaKnown RBP eCLIP12.03□□□□□ -0.48
CCDC170-202ENST00000537358 MIER1Q8N108 512 aa12.03□□□□□ -0.48
CCDC170-202ENST00000537358 SH3TC2Q8TF17 1288 aa12.03□□□□□ -0.48
CCDC170-202ENST00000537358 TRIM47Q96LD4 638 aa12.03□□□□□ -0.48
CCDC170-202ENST00000537358 BIN2Q9UBW5 565 aaPredicted RBP12.03□□□□□ -0.48
CCDC170-202ENST00000537358 HERC5Q9UII4 1024 aaKnown RBP12.03□□□□□ -0.48
CCDC170-202ENST00000537358 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.03□□□□□ -0.48
CCDC170-202ENST00000537358 CYP2C8P10632 490 aa12.02□□□□□ -0.49
CCDC170-202ENST00000537358 OSBPP22059 807 aa12.02□□□□□ -0.49
CCDC170-202ENST00000537358 GRK4P32298 578 aa12.02□□□□□ -0.49
CCDC170-202ENST00000537358 UBXN2AP68543 259 aa12.02□□□□□ -0.49
CCDC170-202ENST00000537358 MOGSQ13724 837 aa12.02□□□□□ -0.49
CCDC170-202ENST00000537358 GPAT2Q6NUI2 795 aa12.02□□□□□ -0.49
CCDC170-202ENST00000537358 CERS3Q8IU89 383 aa12.02□□□□□ -0.49
CCDC170-202ENST00000537358 ERC1Q8IUD2 1116 aa12.02□□□□□ -0.49
CCDC170-202ENST00000537358 PROCA1Q8NCQ7 364 aaPredicted RBP12.02□□□□□ -0.49
CCDC170-202ENST00000537358 NKX2-3Q8TAU0 364 aa12.02□□□□□ -0.49
CCDC170-202ENST00000537358 DBNDD2Q9BQY9 259 aa12.02□□□□□ -0.49
CCDC170-202ENST00000537358 C1orf115Q9H7X2 142 aa12.02□□□□□ -0.49
CCDC170-202ENST00000537358 AS3MTQ9HBK9 375 aa12.02□□□□□ -0.49
CCDC170-202ENST00000537358 SNRKQ9NRH2 765 aa12.02□□□□□ -0.49
CCDC170-202ENST00000537358 AATFQ9NY61 560 aaKnown RBP eCLIP12.02□□□□□ -0.49
CCDC170-202ENST00000537358 PI4KBQ9UBF8 816 aa12.02□□□□□ -0.49
CCDC170-202ENST00000537358 ADGRA2Q96PE1 1338 aa12.02□□□□□ -0.49
CCDC170-202ENST00000537358 BCRP11274 1271 aa12.01□□□□□ -0.49
CCDC170-202ENST00000537358 HSP90AB4PQ58FF6 505 aa12.01□□□□□ -0.49
CCDC170-202ENST00000537358 CRACR2BQ8N4Y2 399 aaPredicted RBP12.01□□□□□ -0.49
CCDC170-202ENST00000537358 ZNF280CQ8ND82 737 aa12.01□□□□□ -0.49
CCDC170-202ENST00000537358 SH3RF3Q8TEJ3 882 aaPredicted RBP12.01□□□□□ -0.49
CCDC170-202ENST00000537358 ZNF384Q8TF68 577 aa12.01□□□□□ -0.49
CCDC170-202ENST00000537358 ZNF512BQ96KM6 892 aaPredicted RBP12.01□□□□□ -0.49
CCDC170-202ENST00000537358 AGTPBP1Q9UPW5 1226 aa12.01□□□□□ -0.49
CCDC170-202ENST00000537358 NOP58Q9Y2X3 529 aaKnown RBP12.01□□□□□ -0.49
CCDC170-202ENST00000537358 ZBED9Q6R2W3 1325 aa12.01□□□□□ -0.49
CCDC170-202ENST00000537358 FOCADQ5VW36 1801 aa12□□□□□ -0.49
CCDC170-202ENST00000537358 MYO5AQ9Y4I1 1855 aaKnown RBP12□□□□□ -0.49
CCDC170-202ENST00000537358 FAM196BA6NMK8 535 aa12□□□□□ -0.49
CCDC170-202ENST00000537358 USP17L5A8MUK1 530 aa12□□□□□ -0.49
CCDC170-202ENST00000537358 PITPNM1O00562 1244 aa12□□□□□ -0.49
CCDC170-202ENST00000537358 TNPO2O14787 897 aaKnown RBP12□□□□□ -0.49
CCDC170-202ENST00000537358 ZBTB7BO15156 539 aaPredicted RBP12□□□□□ -0.49
CCDC170-202ENST00000537358 HLA-DOAP06340 250 aa12□□□□□ -0.49
CCDC170-202ENST00000537358 CAP2P40123 477 aa12□□□□□ -0.49
CCDC170-202ENST00000537358 SLAIN1Q8ND83 568 aa12□□□□□ -0.49
CCDC170-202ENST00000537358 TGFBRAP1Q8WUH2 860 aa12□□□□□ -0.49
CCDC170-202ENST00000537358 CDK5RAP2Q96SN8 1893 aa12□□□□□ -0.49
CCDC170-202ENST00000537358 IDH1O75874 414 aaKnown RBP11.99□□□□□ -0.49
CCDC170-202ENST00000537358 CYP2E1P05181 493 aaPredicted RBP11.99□□□□□ -0.49
CCDC170-202ENST00000537358 ASNSP08243 561 aa11.99□□□□□ -0.49
CCDC170-202ENST00000537358 ZAP70P43403 619 aa11.99□□□□□ -0.49
CCDC170-202ENST00000537358 GCLCP48506 637 aaPredicted RBP11.99□□□□□ -0.49
CCDC170-202ENST00000537358 VASPP50552 380 aaPredicted RBP11.99□□□□□ -0.49
CCDC170-202ENST00000537358 PPP4CP60510 307 aa11.99□□□□□ -0.49
CCDC170-202ENST00000537358 PRKCZQ05513 592 aa11.99□□□□□ -0.49
CCDC170-202ENST00000537358 SPP2Q13103 211 aa11.99□□□□□ -0.49
CCDC170-202ENST00000537358 TMED8Q6PL24 325 aaPredicted RBP11.99□□□□□ -0.49
CCDC170-202ENST00000537358 FOXP4Q8IVH2 680 aaPredicted RBP11.99□□□□□ -0.49
CCDC170-202ENST00000537358 COA7Q96BR5 231 aa11.99□□□□□ -0.49
CCDC170-202ENST00000537358 CCDC8Q9H0W5 538 aaPredicted RBP11.99□□□□□ -0.49
CCDC170-202ENST00000537358 CHMP4BQ9H444 224 aaKnown RBP11.99□□□□□ -0.49
CCDC170-202ENST00000537358 GINM1Q9NU53 330 aa11.99□□□□□ -0.49
CCDC170-202ENST00000537358 LOC285556D6RIA3 1793 aa11.99□□□□□ -0.49
CCDC170-202ENST00000537358 MYH1P12882 1939 aa11.98□□□□□ -0.49
CCDC170-202ENST00000537358 FLT1P17948 1338 aa11.98□□□□□ -0.49
CCDC170-202ENST00000537358 HMMRO75330 724 aa11.98□□□□□ -0.49
CCDC170-202ENST00000537358 SLURP2P0DP57 97 aa11.98□□□□□ -0.49
CCDC170-202ENST00000537358 RLBP1P12271 317 aa11.98□□□□□ -0.49
CCDC170-202ENST00000537358 CYP7A1P22680 504 aa11.98□□□□□ -0.49
CCDC170-202ENST00000537358 CTGFP29279 349 aa11.98□□□□□ -0.49
CCDC170-202ENST00000537358 HMGCS2P54868 508 aa11.98□□□□□ -0.49
CCDC170-202ENST00000537358 MAP3K12Q12852 859 aa11.98□□□□□ -0.49
CCDC170-202ENST00000537358 MAPKAPK5Q8IW41 473 aa11.98□□□□□ -0.49
CCDC170-202ENST00000537358 ANKRD13CQ8N6S4 541 aa11.98□□□□□ -0.49
CCDC170-202ENST00000537358 RNF208Q9H0X6 261 aa11.98□□□□□ -0.49
CCDC170-202ENST00000537358 TMOD4Q9NZQ9 345 aa11.98□□□□□ -0.49
CCDC170-202ENST00000537358 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.98□□□□□ -0.49
CCDC170-202ENST00000537358 DBNLQ9UJU6 430 aaKnown RBP11.98□□□□□ -0.49
CCDC170-202ENST00000537358 ADCY3O60266 1144 aa11.97□□□□□ -0.49
CCDC170-202ENST00000537358 CCL5P13501 91 aa11.97□□□□□ -0.49
CCDC170-202ENST00000537358 CAPN2P17655 700 aa11.97□□□□□ -0.49
CCDC170-202ENST00000537358 USP5P45974 858 aa11.97□□□□□ -0.49
CCDC170-202ENST00000537358 IRX3P78415 501 aaPredicted RBP11.97□□□□□ -0.49
CCDC170-202ENST00000537358 MTFR1Q15390 333 aa11.97□□□□□ -0.49
CCDC170-202ENST00000537358 FAM110CQ1W6H9 321 aa11.97□□□□□ -0.49
CCDC170-202ENST00000537358 CEP85Q6P2H3 762 aa11.97□□□□□ -0.49
CCDC170-202ENST00000537358 CCDC84Q86UT8 332 aaPredicted RBP11.97□□□□□ -0.49
CCDC170-202ENST00000537358 AACSQ86V21 672 aa11.97□□□□□ -0.49
CCDC170-202ENST00000537358 EAF2Q96CJ1 260 aaPredicted RBP11.97□□□□□ -0.49
CCDC170-202ENST00000537358 PCDH10Q9P2E7 1040 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms