RNA–Protein interactions for RNA: ENST00000536723.5

USP30-209, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-209ENST00000536723 DOCK1Q14185 1865 aa23.35■■□□□ 1.33
USP30-209ENST00000536723 FAM196BA6NMK8 535 aa23.35■■□□□ 1.33
USP30-209ENST00000536723 XRCC5P13010 732 aaKnown RBP23.35■■□□□ 1.33
USP30-209ENST00000536723 CACNB2Q08289 660 aaPredicted RBP23.35■■□□□ 1.33
USP30-209ENST00000536723 NCBP3Q53F19 620 aaKnown RBP23.35■■□□□ 1.33
USP30-209ENST00000536723 MAFAQ8NHW3 353 aaPredicted RBP23.35■■□□□ 1.33
USP30-209ENST00000536723 LBHD1Q9BQE6 289 aaPredicted RBP23.35■■□□□ 1.33
USP30-209ENST00000536723 TBC1D12O60347 775 aa23.34■■□□□ 1.33
USP30-209ENST00000536723 PEX10O60683 326 aa23.34■■□□□ 1.33
USP30-209ENST00000536723 CCND3P30281 292 aaPredicted RBP23.34■■□□□ 1.33
USP30-209ENST00000536723 CCDC184Q52MB2 194 aa23.34■■□□□ 1.33
USP30-209ENST00000536723 WDR63Q8IWG1 891 aa23.34■■□□□ 1.33
USP30-209ENST00000536723 NUDT12Q9BQG2 462 aa23.34■■□□□ 1.33
USP30-209ENST00000536723 GNL3LQ9NVN8 582 aaKnown RBP23.34■■□□□ 1.33
USP30-209ENST00000536723 SALL2Q9Y467 1007 aaPredicted RBP23.34■■□□□ 1.33
USP30-209ENST00000536723 LAMA2P24043 3122 aaKnown RBP23.33■■□□□ 1.33
USP30-209ENST00000536723 RFX5P48382 616 aaPredicted RBP23.33■■□□□ 1.33
USP30-209ENST00000536723 SEMA6BQ9H3T3 888 aa23.33■■□□□ 1.33
USP30-209ENST00000536723 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.33■■□□□ 1.33
USP30-209ENST00000536723 DENND2AQ9ULE3 1009 aa23.33■■□□□ 1.33
USP30-209ENST00000536723 PLXNB2O15031 1838 aa23.33■■□□□ 1.32
USP30-209ENST00000536723 ZKSCAN1P17029 563 aaPredicted RBP23.32■■□□□ 1.32
USP30-209ENST00000536723 ATG9AQ7Z3C6 839 aa23.32■■□□□ 1.32
USP30-209ENST00000536723 SOCS4Q8WXH5 440 aa23.32■■□□□ 1.32
USP30-209ENST00000536723 OSBPL5Q9H0X9 879 aaPredicted RBP23.32■■□□□ 1.32
USP30-209ENST00000536723 PHKA1P46020 1223 aa23.31■■□□□ 1.32
USP30-209ENST00000536723 SH3D19Q5HYK7 790 aa23.31■■□□□ 1.32
USP30-209ENST00000536723 TXNRD2Q9NNW7 524 aa23.31■■□□□ 1.32
USP30-209ENST00000536723 MYH13Q9UKX3 1938 aa23.3■■□□□ 1.32
USP30-209ENST00000536723 SEMA3EO15041 775 aa23.3■■□□□ 1.32
USP30-209ENST00000536723 BTDP43251 543 aa23.3■■□□□ 1.32
USP30-209ENST00000536723 RRP1BQ14684 758 aaKnown RBP23.3■■□□□ 1.32
USP30-209ENST00000536723 CCL14Q16627 93 aa23.3■■□□□ 1.32
USP30-209ENST00000536723 TRMT44Q8IYL2 757 aaKnown RBP23.3■■□□□ 1.32
USP30-209ENST00000536723 GPRC5AQ8NFJ5 357 aa23.3■■□□□ 1.32
USP30-209ENST00000536723 USP6NLQ92738 828 aa23.3■■□□□ 1.32
USP30-209ENST00000536723 FAM163AQ96GL9 167 aaPredicted RBP23.3■■□□□ 1.32
USP30-209ENST00000536723 P2RX7Q99572 595 aaKnown RBP23.3■■□□□ 1.32
USP30-209ENST00000536723 TBC1D2Q9BYX2 928 aa23.3■■□□□ 1.32
USP30-209ENST00000536723 SENP6Q9GZR1 1112 aaPredicted RBP23.3■■□□□ 1.32
USP30-209ENST00000536723 ATP2B3Q16720 1220 aa23.29■■□□□ 1.32
USP30-209ENST00000536723 DZIP1Q86YF9 867 aaKnown RBP23.29■■□□□ 1.32
USP30-209ENST00000536723 LOC285556D6RIA3 1793 aa23.28■■□□□ 1.32
USP30-209ENST00000536723 USP17L5A8MUK1 530 aa23.28■■□□□ 1.32
USP30-209ENST00000536723 CAP2P40123 477 aa23.28■■□□□ 1.32
USP30-209ENST00000536723 RHBDL3P58872 404 aa23.28■■□□□ 1.32
USP30-209ENST00000536723 IRX3P78415 501 aaPredicted RBP23.28■■□□□ 1.32
USP30-209ENST00000536723 SHHQ15465 462 aa23.28■■□□□ 1.32
USP30-209ENST00000536723 ZGPATQ8N5A5 531 aaKnown RBP23.28■■□□□ 1.32
USP30-209ENST00000536723 MYLIPQ8WY64 445 aa23.28■■□□□ 1.32
USP30-209ENST00000536723 USP44Q9H0E7 712 aa23.28■■□□□ 1.32
USP30-209ENST00000536723 ABCF2Q9UG63 623 aa23.28■■□□□ 1.32
USP30-209ENST00000536723 COL9A1P20849 921 aa23.27■■□□□ 1.32
USP30-209ENST00000536723 ATN1P54259 1190 aaPredicted RBP23.27■■□□□ 1.32
USP30-209ENST00000536723 PDE3AQ14432 1141 aa23.27■■□□□ 1.32
USP30-209ENST00000536723 Q3C1V9 767 aa23.27■■□□□ 1.32
USP30-209ENST00000536723 SLF2Q8IX21 1173 aa23.27■■□□□ 1.32
USP30-209ENST00000536723 SYMPKQ92797 1274 aaKnown RBP23.27■■□□□ 1.32
USP30-209ENST00000536723 RBPJLQ9UBG7 517 aa23.27■■□□□ 1.32
USP30-209ENST00000536723 PRUNE2Q8WUY3 3088 aa23.27■■□□□ 1.32
USP30-209ENST00000536723 MAPK4P31152 587 aa23.26■■□□□ 1.31
USP30-209ENST00000536723 HOXA7P31268 230 aaPredicted RBP23.26■■□□□ 1.31
USP30-209ENST00000536723 TTYH1Q9H313 450 aaPredicted RBP23.26■■□□□ 1.31
USP30-209ENST00000536723 AS3MTQ9HBK9 375 aa23.26■■□□□ 1.31
USP30-209ENST00000536723 CEP126Q9P2H0 1117 aa23.26■■□□□ 1.31
USP30-209ENST00000536723 CDH23Q9H251 3354 aa23.26■■□□□ 1.31
USP30-209ENST00000536723 GPR75-ASB3A0A0A6YYF3 556 aa23.25■■□□□ 1.31
USP30-209ENST00000536723 NPM3O75607 178 aaKnown RBP23.25■■□□□ 1.31
USP30-209ENST00000536723 RGS2P41220 211 aa23.25■■□□□ 1.31
USP30-209ENST00000536723 HERVK_113P62684 666 aa23.25■■□□□ 1.31
USP30-209ENST00000536723 MTMR2Q13614 643 aa23.25■■□□□ 1.31
USP30-209ENST00000536723 C9orf50Q5SZB4 431 aa23.25■■□□□ 1.31
USP30-209ENST00000536723 MORN1Q5T089 497 aa23.25■■□□□ 1.31
USP30-209ENST00000536723 CCDC102BQ68D86 513 aa23.25■■□□□ 1.31
USP30-209ENST00000536723 SIL1Q9H173 461 aa23.25■■□□□ 1.31
USP30-209ENST00000536723 PORCNQ9H237 461 aa23.25■■□□□ 1.31
USP30-209ENST00000536723 PRKAG2Q9UGJ0 569 aa23.25■■□□□ 1.31
USP30-209ENST00000536723 TTC28Q96AY4 2481 aa23.25■■□□□ 1.31
USP30-209ENST00000536723 MROH7-TTC4A0A0A0MT08 1334 aa23.25■■□□□ 1.31
USP30-209ENST00000536723 MYH2Q9UKX2 1941 aa23.25■■□□□ 1.31
USP30-209ENST00000536723 ZBTB22O15209 634 aa23.24■■□□□ 1.31
USP30-209ENST00000536723 ADORA1P30542 326 aa23.24■■□□□ 1.31
USP30-209ENST00000536723 GPR142Q7Z601 462 aa23.24■■□□□ 1.31
USP30-209ENST00000536723 BACE1P56817 501 aa23.23■■□□□ 1.31
USP30-209ENST00000536723 RASGRF1Q13972 1273 aa23.23■■□□□ 1.31
USP30-209ENST00000536723 CCAR1Q8IX12 1150 aaKnown RBP23.23■■□□□ 1.31
USP30-209ENST00000536723 APBA2Q99767 749 aa23.23■■□□□ 1.31
USP30-209ENST00000536723 WDR18Q9BV38 432 aa23.23■■□□□ 1.31
USP30-209ENST00000536723 TMOD4Q9NZQ9 345 aa23.23■■□□□ 1.31
USP30-209ENST00000536723 CIAO1O76071 339 aa23.22■■□□□ 1.31
USP30-209ENST00000536723 FOSL2P15408 326 aa23.22■■□□□ 1.31
USP30-209ENST00000536723 RTP1P59025 263 aa23.22■■□□□ 1.31
USP30-209ENST00000536723 ERVK-9P63128 1117 aa23.22■■□□□ 1.31
USP30-209ENST00000536723 ERVK-24P63145 666 aa23.22■■□□□ 1.31
USP30-209ENST00000536723 MECOMQ03112 1051 aa23.22■■□□□ 1.31
USP30-209ENST00000536723 POTEEQ6S8J3 1075 aa23.22■■□□□ 1.31
USP30-209ENST00000536723 PLEKHH3Q7Z736 793 aa23.22■■□□□ 1.31
USP30-209ENST00000536723 ZNF384Q8TF68 577 aa23.22■■□□□ 1.31
USP30-209ENST00000536723 MUC3AQ02505 3323 aa23.22■■□□□ 1.31
USP30-209ENST00000536723 SPTY2D1Q68D10 685 aaPredicted RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms