RNA–Protein interactions for RNA: ENST00000536722.5

RFX4-205, Transcript of regulatory factor X4, humanhuman

TSL 2

Gene RFX4, Length 1,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-205ENST00000536722 R3HDMLQ9H3Y0 253 aa13.81□□□□□ -0.2
RFX4-205ENST00000536722 PRDM10Q9NQV6 1147 aa13.81□□□□□ -0.2
RFX4-205ENST00000536722 SAGE1Q9NXZ1 904 aa13.81□□□□□ -0.2
RFX4-205ENST00000536722 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.81□□□□□ -0.2
RFX4-205ENST00000536722 CSADQ9Y600 493 aa13.81□□□□□ -0.2
RFX4-205ENST00000536722 TTC41PQ6P2S7 1318 aa13.81□□□□□ -0.2
RFX4-205ENST00000536722 CA12O43570 354 aa13.8□□□□□ -0.2
RFX4-205ENST00000536722 TBC1D12O60347 775 aa13.8□□□□□ -0.2
RFX4-205ENST00000536722 EVX2Q03828 476 aa13.8□□□□□ -0.2
RFX4-205ENST00000536722 METTL16Q86W50 562 aaKnown RBP13.8□□□□□ -0.2
RFX4-205ENST00000536722 REM2Q8IYK8 340 aaPredicted RBP13.8□□□□□ -0.2
RFX4-205ENST00000536722 LCORLQ8N3X6 602 aa13.8□□□□□ -0.2
RFX4-205ENST00000536722 OTUD5Q96G74 571 aa13.8□□□□□ -0.2
RFX4-205ENST00000536722 NOL10Q9BSC4 688 aaKnown RBP13.8□□□□□ -0.2
RFX4-205ENST00000536722 MAGEB6P1A0A0J9YX57 407 aa13.79□□□□□ -0.2
RFX4-205ENST00000536722 MANSC4A6NHS7 340 aaPredicted RBP13.79□□□□□ -0.2
RFX4-205ENST00000536722 IRF6O14896 467 aa13.79□□□□□ -0.2
RFX4-205ENST00000536722 MX1P20591 662 aa13.79□□□□□ -0.2
RFX4-205ENST00000536722 JAG1P78504 1218 aa13.79□□□□□ -0.2
RFX4-205ENST00000536722 SHROOM1Q2M3G4 852 aaPredicted RBP13.79□□□□□ -0.2
RFX4-205ENST00000536722 ERO1BQ86YB8 467 aa13.79□□□□□ -0.2
RFX4-205ENST00000536722 IFNL1Q8IU54 200 aa13.79□□□□□ -0.2
RFX4-205ENST00000536722 KBTBD3Q8NAB2 608 aa13.79□□□□□ -0.2
RFX4-205ENST00000536722 BRI3BPQ8WY22 251 aa13.79□□□□□ -0.2
RFX4-205ENST00000536722 BEGAINQ9BUH8 593 aa13.79□□□□□ -0.2
RFX4-205ENST00000536722 STAP2Q9UGK3 403 aa13.79□□□□□ -0.2
RFX4-205ENST00000536722 SAP30BPQ9UHR5 308 aaKnown RBP13.79□□□□□ -0.2
RFX4-205ENST00000536722 PALD1Q9ULE6 856 aa13.79□□□□□ -0.2
RFX4-205ENST00000536722 MYH8P13535 1937 aa13.78□□□□□ -0.2
RFX4-205ENST00000536722 SREBF2Q12772 1141 aa13.78□□□□□ -0.2
RFX4-205ENST00000536722 PPIL2Q13356 520 aa13.78□□□□□ -0.2
RFX4-205ENST00000536722 MOGSQ13724 837 aa13.78□□□□□ -0.2
RFX4-205ENST00000536722 UBE3CQ15386 1083 aa13.78□□□□□ -0.2
RFX4-205ENST00000536722 SLC4A8Q2Y0W8 1093 aa13.78□□□□□ -0.2
RFX4-205ENST00000536722 CCDC84Q86UT8 332 aaPredicted RBP13.78□□□□□ -0.2
RFX4-205ENST00000536722 SCYL3Q8IZE3 742 aa13.78□□□□□ -0.2
RFX4-205ENST00000536722 GPATCH3Q96I76 525 aa13.78□□□□□ -0.2
RFX4-205ENST00000536722 CFHR5Q9BXR6 569 aa13.78□□□□□ -0.2
RFX4-205ENST00000536722 LNPKQ9C0E8 428 aa13.78□□□□□ -0.2
RFX4-205ENST00000536722 PUS7LQ9H0K6 701 aaKnown RBP13.78□□□□□ -0.2
RFX4-205ENST00000536722 RWDD1Q9H446 243 aaPredicted RBP13.78□□□□□ -0.2
RFX4-205ENST00000536722 ARMT1Q9H993 441 aa13.78□□□□□ -0.2
RFX4-205ENST00000536722 LOC285556D6RIA3 1793 aa13.77□□□□□ -0.21
RFX4-205ENST00000536722 PRKAB2O43741 272 aa13.77□□□□□ -0.21
RFX4-205ENST00000536722 GLRX3O76003 335 aaKnown RBP13.77□□□□□ -0.21
RFX4-205ENST00000536722 MBD4O95243 580 aa13.77□□□□□ -0.21
RFX4-205ENST00000536722 TBC1D8O95759 1140 aa13.77□□□□□ -0.21
RFX4-205ENST00000536722 PTPRAP18433 802 aa13.77□□□□□ -0.21
RFX4-205ENST00000536722 PDE1AP54750 535 aa13.77□□□□□ -0.21
RFX4-205ENST00000536722 NUCB1Q02818 461 aa13.77□□□□□ -0.21
RFX4-205ENST00000536722 PPATQ06203 517 aa13.77□□□□□ -0.21
RFX4-205ENST00000536722 B4GALNT3Q6L9W6 998 aa13.77□□□□□ -0.21
RFX4-205ENST00000536722 CERS3Q8IU89 383 aa13.77□□□□□ -0.21
RFX4-205ENST00000536722 SDR42E1Q8WUS8 393 aa13.77□□□□□ -0.21
RFX4-205ENST00000536722 DHX36Q9H2U1 1008 aaKnown RBP13.77□□□□□ -0.21
RFX4-205ENST00000536722 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.77□□□□□ -0.21
RFX4-205ENST00000536722 PI4KBQ9UBF8 816 aa13.77□□□□□ -0.21
RFX4-205ENST00000536722 KCNH4Q9UQ05 1017 aa13.77□□□□□ -0.21
RFX4-205ENST00000536722 HTTP42858 3142 aa13.77□□□□□ -0.21
RFX4-205ENST00000536722 SMIM22K7EJ46 135 aa13.76□□□□□ -0.21
RFX4-205ENST00000536722 CTNND1O60716 968 aaKnown RBP13.76□□□□□ -0.21
RFX4-205ENST00000536722 PLCD1P51178 756 aa13.76□□□□□ -0.21
RFX4-205ENST00000536722 INHBEP58166 350 aa13.76□□□□□ -0.21
RFX4-205ENST00000536722 FAM43AQ8N2R8 423 aa13.76□□□□□ -0.21
RFX4-205ENST00000536722 OSBP2Q969R2 916 aa13.76□□□□□ -0.21
RFX4-205ENST00000536722 DCP1AQ9NPI6 582 aaPredicted RBP13.76□□□□□ -0.21
RFX4-205ENST00000536722 HERC5Q9UII4 1024 aaKnown RBP13.76□□□□□ -0.21
RFX4-205ENST00000536722 ZSWIM8A7E2V4 1837 aa13.76□□□□□ -0.21
RFX4-205ENST00000536722 CCL15-CCL14A0A0B4J2E2 113 aa13.75□□□□□ -0.21
RFX4-205ENST00000536722 USP5P45974 858 aa13.75□□□□□ -0.21
RFX4-205ENST00000536722 CCL15Q16663 113 aa13.75□□□□□ -0.21
RFX4-205ENST00000536722 CHD1LQ86WJ1 897 aa13.75□□□□□ -0.21
RFX4-205ENST00000536722 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.75□□□□□ -0.21
RFX4-205ENST00000536722 AFG3L2Q9Y4W6 797 aa13.75□□□□□ -0.21
RFX4-205ENST00000536722 BTBD19C9JJ37 291 aa13.74□□□□□ -0.21
RFX4-205ENST00000536722 M0R2C6 588 aa13.74□□□□□ -0.21
RFX4-205ENST00000536722 ERC2O15083 957 aa13.74□□□□□ -0.21
RFX4-205ENST00000536722 CYP2D6P10635 497 aa13.74□□□□□ -0.21
RFX4-205ENST00000536722 CAP2P40123 477 aa13.74□□□□□ -0.21
RFX4-205ENST00000536722 GTF2A2P52657 109 aa13.74□□□□□ -0.21
RFX4-205ENST00000536722 CAP1Q01518 475 aa13.74□□□□□ -0.21
RFX4-205ENST00000536722 GABPAQ06546 454 aa13.74□□□□□ -0.21
RFX4-205ENST00000536722 PLEKHM2Q8IWE5 1019 aa13.74□□□□□ -0.21
RFX4-205ENST00000536722 CRNKL1Q9BZJ0 848 aaKnown RBP13.74□□□□□ -0.21
RFX4-205ENST00000536722 EHD4Q9H223 541 aa13.74□□□□□ -0.21
RFX4-205ENST00000536722 RNF113AO15541 343 aaKnown RBP13.73□□□□□ -0.21
RFX4-205ENST00000536722 PDE4AP27815 886 aa13.73□□□□□ -0.21
RFX4-205ENST00000536722 CRHR2Q13324 411 aa13.73□□□□□ -0.21
RFX4-205ENST00000536722 SNAPC2Q13487 334 aa13.73□□□□□ -0.21
RFX4-205ENST00000536722 GPAT2Q6NUI2 795 aa13.73□□□□□ -0.21
RFX4-205ENST00000536722 TATDN1Q6P1N9 297 aa13.73□□□□□ -0.21
RFX4-205ENST00000536722 FOXP4Q8IVH2 680 aaPredicted RBP13.73□□□□□ -0.21
RFX4-205ENST00000536722 APPBP2Q92624 585 aa13.73□□□□□ -0.21
RFX4-205ENST00000536722 STRBPQ96SI9 672 aaKnown RBP13.73□□□□□ -0.21
RFX4-205ENST00000536722 SEC62Q99442 399 aaKnown RBP13.73□□□□□ -0.21
RFX4-205ENST00000536722 ZHX2Q9Y6X8 837 aa13.73□□□□□ -0.21
RFX4-205ENST00000536722 GREB1LQ9C091 1923 aaPredicted RBP13.72□□□□□ -0.21
RFX4-205ENST00000536722 CYP2D7A0A087X1C5 515 aa13.72□□□□□ -0.21
RFX4-205ENST00000536722 A0A0G2JLL6 359 aaPredicted RBP13.72□□□□□ -0.21
RFX4-205ENST00000536722 GPR25O00155 361 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms