RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 ESR2Q92731 530 aa9.53□□□□□ -0.88
ABCA4-207ENST00000536513 ALG1Q9BT22 464 aa9.53□□□□□ -0.88
ABCA4-207ENST00000536513 ZDHHC9Q9Y397 364 aa9.53□□□□□ -0.88
ABCA4-207ENST00000536513 LRRC37A3O60309 1634 aa9.52□□□□□ -0.88
ABCA4-207ENST00000536513 KLHL40Q2TBA0 621 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 PRAMEF18Q5VWM3 479 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 SPTY2D1Q68D10 685 aaPredicted RBP9.52□□□□□ -0.89
ABCA4-207ENST00000536513 MIGA2Q7L4E1 593 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 ANGEL1Q9UNK9 670 aaKnown RBP9.52□□□□□ -0.89
ABCA4-207ENST00000536513 RIC1Q4ADV7 1423 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 CCDC66A2RUB6 948 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 BBOX1O75936 387 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 DPEP1P16444 411 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 PDIA3P30101 505 aaKnown RBP9.52□□□□□ -0.89
ABCA4-207ENST00000536513 CCDC96Q2M329 555 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 GIMAP6Q6P9H5 292 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 WDR66Q8TBY9 1149 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 USP25Q9UHP3 1055 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 ATP6V1DQ9Y5K8 247 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 V9GY48 417 aaPredicted RBP9.52□□□□□ -0.89
ABCA4-207ENST00000536513 PNPLA7Q6ZV29 1317 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 F13A1P00488 732 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 PDCP20941 246 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 KRT85P78386 507 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 PDE4BQ07343 736 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 TRIM22Q8IYM9 498 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 LRRC47Q8N1G4 583 aaKnown RBP9.52□□□□□ -0.89
ABCA4-207ENST00000536513 NSUN4Q96CB9 384 aaKnown RBP9.52□□□□□ -0.89
ABCA4-207ENST00000536513 BRIP1Q9BX63 1249 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 TNKSO95271 1327 aa9.52□□□□□ -0.89
ABCA4-207ENST00000536513 PCNTO95613 3336 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 CACNA1FO60840 1977 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 ARID4AP29374 1257 aaPredicted RBP9.51□□□□□ -0.89
ABCA4-207ENST00000536513 TM4SF1P30408 202 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 MASTLQ96GX5 879 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 TTC14Q96N46 770 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 TDRD3Q9H7E2 651 aaKnown RBP9.51□□□□□ -0.89
ABCA4-207ENST00000536513 BIN1O00499 593 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 LDHCP07864 332 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 SRGNP10124 158 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 ATP2B4P23634 1241 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 RTN1Q16799 776 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 CCDC84Q86UT8 332 aaPredicted RBP9.51□□□□□ -0.89
ABCA4-207ENST00000536513 SPICE1Q8N0Z3 855 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 OGFOD1Q8N543 542 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 TTC12Q9H892 705 aaPredicted RBP9.51□□□□□ -0.89
ABCA4-207ENST00000536513 SLC24A3Q9HC58 644 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 GPCPD1Q9NPB8 672 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 GDF11O95390 407 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 NPR1P16066 1061 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 PLCD1P51178 756 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 DHX8Q14562 1220 aaKnown RBP9.51□□□□□ -0.89
ABCA4-207ENST00000536513 CATIPQ7Z7H3 387 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 CTCFLQ8NI51 663 aaPredicted RBP9.51□□□□□ -0.89
ABCA4-207ENST00000536513 SDF4Q9BRK5 362 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 UBA5Q9GZZ9 404 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 RBSNQ9H1K0 784 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 KAT14Q9H8E8 782 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 VPS54Q9P1Q0 977 aa9.51□□□□□ -0.89
ABCA4-207ENST00000536513 FRMPD2Q68DX3 1309 aaPredicted RBP9.5□□□□□ -0.89
ABCA4-207ENST00000536513 MARCH6O60337 910 aa9.5□□□□□ -0.89
ABCA4-207ENST00000536513 MBD3O95983 291 aa9.5□□□□□ -0.89
ABCA4-207ENST00000536513 ATXN8OSP0DMR3 200 aa9.5□□□□□ -0.89
ABCA4-207ENST00000536513 SAFBQ15424 915 aaKnown RBP eCLIP9.5□□□□□ -0.89
ABCA4-207ENST00000536513 ARHGAP27Q6ZUM4 889 aa9.5□□□□□ -0.89
ABCA4-207ENST00000536513 C17orf53Q8N3J3 647 aaPredicted RBP9.5□□□□□ -0.89
ABCA4-207ENST00000536513 JDP2Q8WYK2 163 aa9.5□□□□□ -0.89
ABCA4-207ENST00000536513 ONECUT3O60422 494 aaPredicted RBP9.5□□□□□ -0.89
ABCA4-207ENST00000536513 HSP90AA4PQ58FG1 418 aa9.5□□□□□ -0.89
ABCA4-207ENST00000536513 GTF3C6Q969F1 213 aa9.5□□□□□ -0.89
ABCA4-207ENST00000536513 RNF41Q9H4P4 317 aaPredicted RBP9.5□□□□□ -0.89
ABCA4-207ENST00000536513 LEMD3Q9Y2U8 911 aa9.5□□□□□ -0.89
ABCA4-207ENST00000536513 MED23Q9ULK4 1368 aa9.5□□□□□ -0.89
ABCA4-207ENST00000536513 ITGB4P16144 1822 aa9.5□□□□□ -0.89
ABCA4-207ENST00000536513 SNAP25P60880 206 aa9.49□□□□□ -0.89
ABCA4-207ENST00000536513 SSRP1Q08945 709 aaKnown RBP9.49□□□□□ -0.89
ABCA4-207ENST00000536513 DCP1AQ9NPI6 582 aaPredicted RBP9.49□□□□□ -0.89
ABCA4-207ENST00000536513 TOGARAM1Q9Y4F4 1720 aa9.49□□□□□ -0.89
ABCA4-207ENST00000536513 PLCH1Q4KWH8 1693 aa9.49□□□□□ -0.89
ABCA4-207ENST00000536513 HEATR3Q7Z4Q2 680 aa9.49□□□□□ -0.89
ABCA4-207ENST00000536513 TTLL6Q8N841 843 aa9.49□□□□□ -0.89
ABCA4-207ENST00000536513 IPO4Q8TEX9 1081 aaKnown RBP9.49□□□□□ -0.89
ABCA4-207ENST00000536513 FBXO41Q8TF61 875 aa9.49□□□□□ -0.89
ABCA4-207ENST00000536513 GPKOWQ92917 476 aaPredicted RBP eCLIP9.49□□□□□ -0.89
ABCA4-207ENST00000536513 KRT23Q9C075 422 aa9.49□□□□□ -0.89
ABCA4-207ENST00000536513 FZD1Q9UP38 647 aa9.49□□□□□ -0.89
ABCA4-207ENST00000536513 ECE2O60344 883 aa9.49□□□□□ -0.89
ABCA4-207ENST00000536513 CDC27P30260 824 aa9.49□□□□□ -0.89
ABCA4-207ENST00000536513 ANTXR2P58335 489 aa9.49□□□□□ -0.89
ABCA4-207ENST00000536513 FBXO33Q7Z6M2 555 aa9.49□□□□□ -0.89
ABCA4-207ENST00000536513 FLAD1Q8NFF5 587 aa9.49□□□□□ -0.89
ABCA4-207ENST00000536513 PLIN2Q99541 437 aa9.49□□□□□ -0.89
ABCA4-207ENST00000536513 NOL7Q9UMY1 257 aaKnown RBP9.49□□□□□ -0.89
ABCA4-207ENST00000536513 MTMR6Q9Y217 621 aa9.49□□□□□ -0.89
ABCA4-207ENST00000536513 VIRMAQ69YN4 1812 aaKnown RBP9.49□□□□□ -0.89
ABCA4-207ENST00000536513 NFIAQ12857 509 aa9.48□□□□□ -0.89
ABCA4-207ENST00000536513 SLC10A5Q5PT55 438 aa9.48□□□□□ -0.89
ABCA4-207ENST00000536513 CTR9Q6PD62 1173 aa9.48□□□□□ -0.89
ABCA4-207ENST00000536513 EYA3Q99504 573 aa9.48□□□□□ -0.89
ABCA4-207ENST00000536513 APOA5Q6Q788 366 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms